RNA–Protein interactions for RNA: ENST00000445153.1

SMARCAL1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 5

Gene SMARCAL1, Length 484 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-210ENST00000445153 TUBA8Q9NY65 449 aaPredicted RBP13.11□□□□□ -0.31
SMARCAL1-210ENST00000445153 GPRC5BQ9NZH0 403 aa13.11□□□□□ -0.31
SMARCAL1-210ENST00000445153 Q9UFV3 132 aa13.11□□□□□ -0.31
SMARCAL1-210ENST00000445153 MRPS33Q9Y291 106 aaKnown RBP13.11□□□□□ -0.31
SMARCAL1-210ENST00000445153 ATP6AP2A0A1C7CYW4 349 aa13.1□□□□□ -0.31
SMARCAL1-210ENST00000445153 FOXO6A8MYZ6 492 aa13.1□□□□□ -0.31
SMARCAL1-210ENST00000445153 C17orf105B2RV13 164 aa13.1□□□□□ -0.31
SMARCAL1-210ENST00000445153 SH3BGRLO75368 114 aa13.1□□□□□ -0.31
SMARCAL1-210ENST00000445153 ATP6AP2O75787 350 aa13.1□□□□□ -0.31
SMARCAL1-210ENST00000445153 TNNI3P19429 210 aa13.1□□□□□ -0.31
SMARCAL1-210ENST00000445153 ENDOUP21128 410 aaKnown RBP13.1□□□□□ -0.31
SMARCAL1-210ENST00000445153 GSTM2P28161 218 aa13.1□□□□□ -0.31
SMARCAL1-210ENST00000445153 DNAJA1P31689 397 aaKnown RBP13.1□□□□□ -0.31
SMARCAL1-210ENST00000445153 PIGAP37287 484 aa13.1□□□□□ -0.31
SMARCAL1-210ENST00000445153 ART1P52961 327 aa13.1□□□□□ -0.31
SMARCAL1-210ENST00000445153 STX4Q12846 297 aa13.1□□□□□ -0.31
SMARCAL1-210ENST00000445153 DLG1Q12959 904 aa13.1□□□□□ -0.31
SMARCAL1-210ENST00000445153 HYAL4Q2M3T9 481 aa13.1□□□□□ -0.31
SMARCAL1-210ENST00000445153 RGS9BPQ6ZS82 235 aa13.1□□□□□ -0.31
SMARCAL1-210ENST00000445153 SLC22A16Q86VW1 577 aa13.1□□□□□ -0.31
SMARCAL1-210ENST00000445153 FAM109AQ8N4B1 249 aa13.1□□□□□ -0.31
SMARCAL1-210ENST00000445153 ACOT4Q8N9L9 421 aa13.1□□□□□ -0.31
SMARCAL1-210ENST00000445153 OR10Q1Q8NGQ4 319 aa13.1□□□□□ -0.31
SMARCAL1-210ENST00000445153 SLC2A12Q8TD20 617 aa13.1□□□□□ -0.31
SMARCAL1-210ENST00000445153 DOK4Q8TEW6 326 aa13.1□□□□□ -0.31
SMARCAL1-210ENST00000445153 DAZLQ92904 295 aaKnown RBP13.1□□□□□ -0.31
SMARCAL1-210ENST00000445153 RUNDC3BQ96NL0 473 aa13.1□□□□□ -0.31
SMARCAL1-210ENST00000445153 ZNF559Q9BR84 538 aa13.1□□□□□ -0.31
SMARCAL1-210ENST00000445153 ERP44Q9BS26 406 aa13.1□□□□□ -0.31
SMARCAL1-210ENST00000445153 PITHD1Q9GZP4 211 aaPredicted RBP13.1□□□□□ -0.31
SMARCAL1-210ENST00000445153 LIME1Q9H400 295 aa13.1□□□□□ -0.31
SMARCAL1-210ENST00000445153 EHD1Q9H4M9 534 aa13.1□□□□□ -0.31
SMARCAL1-210ENST00000445153 POPDC3Q9HBV1 291 aa13.1□□□□□ -0.31
SMARCAL1-210ENST00000445153 KCNN3Q9UGI6 736 aa13.1□□□□□ -0.31
SMARCAL1-210ENST00000445153 A0A088AWK7 358 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 OR14I1A6ND48 311 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 FAM159BA6NKW6 160 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 WASHC1A8K0Z3 465 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 ACOT7O00154 380 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 HRKO00198 91 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 CLGNO14967 610 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 FGF17O60258 216 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 STK16O75716 305 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 RFPL3SP0C7P2 107 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 CCDC166P0CW27 439 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 CD1DP15813 335 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 ZNF10P21506 573 aaPredicted RBP13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 ATP5A1P25705 553 aaKnown RBP13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 PAFAH1B1P43034 410 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 PRRC2AP48634 2157 aaKnown RBP13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 IST1P53990 364 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 ASPHQ12797 758 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 EFTUD2Q15029 972 aaKnown RBP eCLIP13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 ZKSCAN8Q15776 578 aaPredicted RBP13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 PIGGQ5H8A4 983 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 NDUFAF5Q5TEU4 345 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 LYPD8Q6UX82 237 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 B3GNT6Q6ZMB0 384 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 GK5Q6ZS86 529 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 FAM47EQ6ZV65 393 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 TMEM200AQ86VY9 491 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 GPSM1Q86YR5 675 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 RNF175Q8N4F7 328 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 SNX31Q8N9S9 440 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 OR8K3Q8NH51 312 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 OR14A16Q8NHC5 309 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 ZNF473Q8WTR7 871 aaKnown RBP13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 PPWD1Q96BP3 646 aaKnown RBP13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 PTCD3Q96EY7 689 aaKnown RBP13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 GPR22Q99680 433 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 RBBP8Q99708 897 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 SORBS1Q9BX66 1292 aaKnown RBP13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 CAPS2Q9BXY5 557 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 MS4A8Q9BY19 250 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 PROK2Q9HC23 129 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 LYRM4Q9HD34 91 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 SH2D2AQ9NP31 389 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 SACM1LQ9NTJ5 587 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 WWOXQ9NZC7 414 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 WHRNQ9P202 907 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 SPRR3Q9UBC9 169 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 PTBP2Q9UKA9 531 aaKnown RBP13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 L3MBTL1Q9Y468 752 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 ATG4BQ9Y4P1 393 aa13.09□□□□□ -0.31
SMARCAL1-210ENST00000445153 SAP18O00422 153 aaKnown RBP13.08□□□□□ -0.32
SMARCAL1-210ENST00000445153 AQP7O14520 342 aa13.08□□□□□ -0.32
SMARCAL1-210ENST00000445153 BCKDKO14874 412 aa13.08□□□□□ -0.32
SMARCAL1-210ENST00000445153 NADKO95544 446 aaPredicted RBP13.08□□□□□ -0.32
SMARCAL1-210ENST00000445153 TGFB1P01137 390 aa13.08□□□□□ -0.32
SMARCAL1-210ENST00000445153 ZFP36L2P47974 494 aaKnown RBP13.08□□□□□ -0.32
SMARCAL1-210ENST00000445153 IGLV3-21P80748 117 aaPredicted RBP13.08□□□□□ -0.32
SMARCAL1-210ENST00000445153 MYBPHQ13203 477 aa13.08□□□□□ -0.32
SMARCAL1-210ENST00000445153 CHIT1Q13231 466 aa13.08□□□□□ -0.32
SMARCAL1-210ENST00000445153 E2F2Q14209 437 aa13.08□□□□□ -0.32
SMARCAL1-210ENST00000445153 SLC10A1Q14973 349 aa13.08□□□□□ -0.32
SMARCAL1-210ENST00000445153 PDK4Q16654 411 aa13.08□□□□□ -0.32
SMARCAL1-210ENST00000445153 ZNF791Q3KP31 576 aaPredicted RBP13.08□□□□□ -0.32
SMARCAL1-210ENST00000445153 SULT1C3Q6IMI6 304 aa13.08□□□□□ -0.32
SMARCAL1-210ENST00000445153 OPN5Q6U736 354 aa13.08□□□□□ -0.32
SMARCAL1-210ENST00000445153 SEM1Q6ZVN7 128 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 145.4 ms