RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 RNF175Q8N4F7 328 aa17.55■□□□□ 0.4
ATPAF2-201ENST00000444058 FAM98AQ8NCA5 519 aaKnown RBP17.55■□□□□ 0.4
ATPAF2-201ENST00000444058 OR8K3Q8NH51 312 aa17.55■□□□□ 0.4
ATPAF2-201ENST00000444058 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.55■□□□□ 0.4
ATPAF2-201ENST00000444058 ANKRD9Q96BM1 317 aaPredicted RBP17.55■□□□□ 0.4
ATPAF2-201ENST00000444058 FRG2BQ96QU4 278 aa17.55■□□□□ 0.4
ATPAF2-201ENST00000444058 SERPINI1Q99574 410 aa17.55■□□□□ 0.4
ATPAF2-201ENST00000444058 RPF2Q9H7B2 306 aaKnown RBP17.55■□□□□ 0.4
ATPAF2-201ENST00000444058 LYARQ9NX58 379 aaKnown RBP17.55■□□□□ 0.4
ATPAF2-201ENST00000444058 FBXW2Q9UKT8 454 aa17.55■□□□□ 0.4
ATPAF2-201ENST00000444058 A0A0A6YYD5 115 aa17.54■□□□□ 0.4
ATPAF2-201ENST00000444058 A8MT66 165 aa17.54■□□□□ 0.4
ATPAF2-201ENST00000444058 NME2P1O60361 137 aa17.54■□□□□ 0.4
ATPAF2-201ENST00000444058 LDB3O75112 727 aa17.54■□□□□ 0.4
ATPAF2-201ENST00000444058 SLC25A12O75746 678 aa17.54■□□□□ 0.4
ATPAF2-201ENST00000444058 OTCP00480 354 aa17.54■□□□□ 0.4
ATPAF2-201ENST00000444058 NME2P22392 152 aa17.54■□□□□ 0.4
ATPAF2-201ENST00000444058 BSGP35613 385 aa17.54■□□□□ 0.4
ATPAF2-201ENST00000444058 BUD31P41223 144 aaPredicted RBP17.54■□□□□ 0.4
ATPAF2-201ENST00000444058 TNFRSF17Q02223 184 aa17.54■□□□□ 0.4
ATPAF2-201ENST00000444058 ZNF468Q5VIY5 522 aaPredicted RBP17.54■□□□□ 0.4
ATPAF2-201ENST00000444058 MRM1Q6IN84 353 aaKnown RBP17.54■□□□□ 0.4
ATPAF2-201ENST00000444058 NUDT13Q86X67 352 aa17.54■□□□□ 0.4
ATPAF2-201ENST00000444058 MYRIPQ8NFW9 859 aa17.54■□□□□ 0.4
ATPAF2-201ENST00000444058 ZNF483Q8TF39 744 aaPredicted RBP17.54■□□□□ 0.4
ATPAF2-201ENST00000444058 TMEM125Q96AQ2 219 aa17.54■□□□□ 0.4
ATPAF2-201ENST00000444058 CDK15Q96Q40 435 aa17.54■□□□□ 0.4
ATPAF2-201ENST00000444058 SORBS1Q9BX66 1292 aaKnown RBP17.54■□□□□ 0.4
ATPAF2-201ENST00000444058 EPB41L4BQ9H329 900 aa17.54■□□□□ 0.4
ATPAF2-201ENST00000444058 PSMC3IPQ9P2W1 217 aaPredicted RBP17.54■□□□□ 0.4
ATPAF2-201ENST00000444058 OSGIN2Q9Y236 505 aa17.54■□□□□ 0.4
ATPAF2-201ENST00000444058 YARS2Q9Y2Z4 477 aaKnown RBP17.54■□□□□ 0.4
ATPAF2-201ENST00000444058 SVILO95425 2214 aa17.53■□□□□ 0.4
ATPAF2-201ENST00000444058 A0A1B0GUH1 482 aa17.53■□□□□ 0.4
ATPAF2-201ENST00000444058 PROM1O43490 865 aa17.53■□□□□ 0.4
ATPAF2-201ENST00000444058 ITGA10O75578 1167 aa17.53■□□□□ 0.4
ATPAF2-201ENST00000444058 ETHE1O95571 254 aa17.53■□□□□ 0.4
ATPAF2-201ENST00000444058 COX7A2P14406 83 aa17.53■□□□□ 0.4
ATPAF2-201ENST00000444058 TNNI3P19429 210 aa17.53■□□□□ 0.4
ATPAF2-201ENST00000444058 TAC1P20366 129 aa17.53■□□□□ 0.4
ATPAF2-201ENST00000444058 MST1P26927 711 aa17.53■□□□□ 0.4
ATPAF2-201ENST00000444058 ARL1P40616 181 aaPredicted RBP17.53■□□□□ 0.4
ATPAF2-201ENST00000444058 STT3AP46977 705 aa17.53■□□□□ 0.4
ATPAF2-201ENST00000444058 NEK2P51955 445 aa17.53■□□□□ 0.4
ATPAF2-201ENST00000444058 HERVK_113P63132 956 aa17.53■□□□□ 0.4
ATPAF2-201ENST00000444058 KRTCAP3Q53RY4 240 aa17.53■□□□□ 0.4
ATPAF2-201ENST00000444058 GFRALQ6UXV0 394 aa17.53■□□□□ 0.4
ATPAF2-201ENST00000444058 HSDL2Q6YN16 418 aa17.53■□□□□ 0.4
ATPAF2-201ENST00000444058 GALNTL5Q7Z4T8 443 aa17.53■□□□□ 0.4
ATPAF2-201ENST00000444058 MILR1Q7Z6M3 343 aa17.53■□□□□ 0.4
ATPAF2-201ENST00000444058 ZNF227Q86WZ6 799 aa17.53■□□□□ 0.4
ATPAF2-201ENST00000444058 GPALPP1Q8IXQ4 340 aa17.53■□□□□ 0.4
ATPAF2-201ENST00000444058 THAP3Q8WTV1 239 aaPredicted RBP17.53■□□□□ 0.4
ATPAF2-201ENST00000444058 RBM18Q96H35 190 aaKnown RBP17.53■□□□□ 0.4
ATPAF2-201ENST00000444058 FRMD6Q96NE9 622 aa17.53■□□□□ 0.4
ATPAF2-201ENST00000444058 NSUN5Q96P11 429 aaKnown RBP17.53■□□□□ 0.4
ATPAF2-201ENST00000444058 ERVK-6Q9BXR3 956 aa17.53■□□□□ 0.4
ATPAF2-201ENST00000444058 PPCSQ9HAB8 311 aa17.53■□□□□ 0.4
ATPAF2-201ENST00000444058 SEMA4BQ9NPR2 832 aaPredicted RBP17.53■□□□□ 0.4
ATPAF2-201ENST00000444058 KLHL1Q9NR64 748 aa17.53■□□□□ 0.4
ATPAF2-201ENST00000444058 AHSPQ9NZD4 102 aa17.53■□□□□ 0.4
ATPAF2-201ENST00000444058 MYOTQ9UBF9 498 aa17.53■□□□□ 0.4
ATPAF2-201ENST00000444058 SEC14L3Q9UDX4 400 aa17.53■□□□□ 0.4
ATPAF2-201ENST00000444058 ATG4BQ9Y4P1 393 aa17.53■□□□□ 0.4
ATPAF2-201ENST00000444058 ASB4Q9Y574 426 aa17.53■□□□□ 0.4
ATPAF2-201ENST00000444058 C17orf105B2RV13 164 aa17.52■□□□□ 0.4
ATPAF2-201ENST00000444058 FGF17O60258 216 aa17.52■□□□□ 0.4
ATPAF2-201ENST00000444058 GSTA1P08263 222 aa17.52■□□□□ 0.4
ATPAF2-201ENST00000444058 RNF224P0DH78 156 aa17.52■□□□□ 0.4
ATPAF2-201ENST00000444058 TNFRSF8P28908 595 aa17.52■□□□□ 0.4
ATPAF2-201ENST00000444058 HNRNPH2P55795 449 aaKnown RBP17.52■□□□□ 0.4
ATPAF2-201ENST00000444058 PER3P56645 1201 aa17.52■□□□□ 0.4
ATPAF2-201ENST00000444058 IFT88Q13099 833 aa17.52■□□□□ 0.4
ATPAF2-201ENST00000444058 MAPKAPK3Q16644 382 aa17.52■□□□□ 0.4
ATPAF2-201ENST00000444058 CYP20A1Q6UW02 462 aa17.52■□□□□ 0.4
ATPAF2-201ENST00000444058 TMEM156Q8N614 296 aa17.52■□□□□ 0.4
ATPAF2-201ENST00000444058 OR4F6Q8NGB9 312 aa17.52■□□□□ 0.4
ATPAF2-201ENST00000444058 MZB1Q8WU39 189 aa17.52■□□□□ 0.4
ATPAF2-201ENST00000444058 RELTQ969Z4 430 aa17.52■□□□□ 0.4
ATPAF2-201ENST00000444058 PELOQ9BRX2 385 aaKnown RBP17.52■□□□□ 0.4
ATPAF2-201ENST00000444058 HES7Q9BYE0 225 aa17.52■□□□□ 0.4
ATPAF2-201ENST00000444058 ELOVL6Q9H5J4 265 aa17.52■□□□□ 0.4
ATPAF2-201ENST00000444058 RYDENQ9NUL5 291 aaKnown RBP17.52■□□□□ 0.4
ATPAF2-201ENST00000444058 TMEM216Q9P0N5 145 aa17.52■□□□□ 0.4
ATPAF2-201ENST00000444058 PLEKHB1Q9UF11 243 aaPredicted RBP17.52■□□□□ 0.4
ATPAF2-201ENST00000444058 ADAM29Q9UKF5 820 aa17.52■□□□□ 0.4
ATPAF2-201ENST00000444058 ICE1Q9Y2F5 2266 aa17.51■□□□□ 0.39
ATPAF2-201ENST00000444058 TMEM200CA6NKL6 621 aa17.51■□□□□ 0.39
ATPAF2-201ENST00000444058 LRRTM2O43300 516 aa17.51■□□□□ 0.39
ATPAF2-201ENST00000444058 DYRK3O43781 588 aa17.51■□□□□ 0.39
ATPAF2-201ENST00000444058 EEDO75530 441 aaKnown RBP17.51■□□□□ 0.39
ATPAF2-201ENST00000444058 UNC5CO95185 931 aa17.51■□□□□ 0.39
ATPAF2-201ENST00000444058 FAM58BPP0C7Q3 252 aa17.51■□□□□ 0.39
ATPAF2-201ENST00000444058 SSR4P51571 173 aa17.51■□□□□ 0.39
ATPAF2-201ENST00000444058 PLIN5Q00G26 463 aa17.51■□□□□ 0.39
ATPAF2-201ENST00000444058 PMP22Q01453 160 aa17.51■□□□□ 0.39
ATPAF2-201ENST00000444058 TTC19Q6DKK2 380 aaPredicted RBP17.51■□□□□ 0.39
ATPAF2-201ENST00000444058 ST13P4Q8IZP2 240 aaPredicted RBP17.51■□□□□ 0.39
ATPAF2-201ENST00000444058 POGLUT1Q8NBL1 392 aa17.51■□□□□ 0.39
ATPAF2-201ENST00000444058 LRRN4CLQ8ND94 238 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms