RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 ZNF764Q96H86 408 aaPredicted RBP4.54□□□□□ -1.68
EDEM3-203ENST00000439962 CCDC74BQ96LY2 380 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 PSD2Q9BQI7 771 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 PAIP1Q9H074 479 aaKnown RBP4.54□□□□□ -1.68
EDEM3-203ENST00000439962 SEMA6AQ9H2E6 1030 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 RAD21L1Q9H4I0 556 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 EHD1Q9H4M9 534 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 NTN4Q9HB63 628 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 DNAJC11Q9NVH1 559 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 GIN1Q9NXP7 522 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 ENOPH1Q9UHY7 261 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 ZNF490Q9ULM2 529 aaPredicted RBP4.54□□□□□ -1.68
EDEM3-203ENST00000439962 RUVBL1Q9Y265 456 aaKnown RBP4.54□□□□□ -1.68
EDEM3-203ENST00000439962 MSRB2Q9Y3D2 182 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 POLR3HQ9Y535 204 aaPredicted RBP4.54□□□□□ -1.68
EDEM3-203ENST00000439962 ENTPD2Q9Y5L3 495 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 DGKBQ9Y6T7 804 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 SDK2Q58EX2 2172 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 BAHCC1Q9P281 2608 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 ADGRG4Q8IZF6 3080 aa4.54□□□□□ -1.68
EDEM3-203ENST00000439962 EFCAB7A8K855 629 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 E9PQ18 207 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 G3V2T6 193 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 CXCR6O00574 342 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 EI24O14681 340 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 PLD2O14939 933 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 KMOO15229 486 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 YKT6O15498 198 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 PSIP1O75475 530 aaKnown RBP4.53□□□□□ -1.68
EDEM3-203ENST00000439962 SEMG1P04279 462 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 SLC2A4P14672 509 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 GPX2P18283 190 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 TSPAN8P19075 237 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 ACP1P24666 158 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 PRDX3P30048 256 aaKnown RBP4.53□□□□□ -1.68
EDEM3-203ENST00000439962 SERPINB1P30740 379 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 S100A3P33764 101 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 MSX2P35548 267 aaPredicted RBP4.53□□□□□ -1.68
EDEM3-203ENST00000439962 HALP42357 657 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 ST13P50502 369 aaKnown RBP4.53□□□□□ -1.68
EDEM3-203ENST00000439962 ARHGDIAP52565 204 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 PDX1P52945 283 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 OR4D2P58180 307 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 YBX1P67809 324 aaKnown RBP4.53□□□□□ -1.68
EDEM3-203ENST00000439962 RABL3Q5HYI8 236 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 GRHL2Q6ISB3 625 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 FAM199XQ6PEV8 388 aaPredicted RBP4.53□□□□□ -1.68
EDEM3-203ENST00000439962 SLC2A7Q6PXP3 512 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 DBX2Q6ZNG2 339 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 TMPRSS7Q7RTY8 843 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 MINDY2Q8NBR6 621 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 GPR156Q8NFN8 814 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 GPBAR1Q8TDU6 330 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 CHTF18Q8WVB6 975 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 ASZ1Q8WWH4 475 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 ISOC1Q96CN7 298 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 SLC47A1Q96FL8 570 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 COX14Q96I36 57 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 TEX37Q96LM6 180 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 CCDC138Q96M89 665 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 TMEM74Q96NL1 305 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 INSM2Q96T92 566 aaPredicted RBP4.53□□□□□ -1.68
EDEM3-203ENST00000439962 EGFL8Q99944 293 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 SLC39A3Q9BRY0 314 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 PITHD1Q9GZP4 211 aaPredicted RBP4.53□□□□□ -1.68
EDEM3-203ENST00000439962 STARD5Q9NSY2 213 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 INTS7Q9NVH2 962 aaKnown RBP4.53□□□□□ -1.68
EDEM3-203ENST00000439962 HRASLS2Q9NWW9 162 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 TRNAU1APQ9NX07 287 aaKnown RBP4.53□□□□□ -1.68
EDEM3-203ENST00000439962 FOXJ2Q9P0K8 574 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 ADGRE2Q9UHX3 823 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 LOXL2Q9Y4K0 774 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 B3GALT1Q9Y5Z6 326 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 PTPRBP23467 1997 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 SCN3AQ9NY46 2000 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 SNRNP200O75643 2136 aaKnown RBP4.53□□□□□ -1.68
EDEM3-203ENST00000439962 KMT2BQ9UMN6 2715 aaPredicted RBP4.53□□□□□ -1.68
EDEM3-203ENST00000439962 A0A1B0GTL3 188 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 EIF4E1BA6NMX2 242 aaKnown RBP4.53□□□□□ -1.68
EDEM3-203ENST00000439962 EVPLLA8MZ36 301 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 MYO1DO94832 1006 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 UBXN7O94888 489 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 C9P02748 559 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 BCKDHAP12694 445 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 ATP6V1B1P15313 513 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 ZNF12P17014 697 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 CD1CP29017 333 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 HSPA7P48741 367 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 RPL38P63173 70 aaKnown RBP4.53□□□□□ -1.68
EDEM3-203ENST00000439962 RBBP4Q09028 425 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 LAPTM5Q13571 262 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 RAPSNQ13702 412 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 MOGQ16653 247 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 ZNF829Q3KNS6 432 aaPredicted RBP4.53□□□□□ -1.68
EDEM3-203ENST00000439962 CCSMST1Q4G0I0 132 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 BCL7AQ4VC05 210 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 RFTN2Q52LD8 501 aaPredicted RBP4.53□□□□□ -1.68
EDEM3-203ENST00000439962 SPIN4Q56A73 249 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 ATP1A1-AS1Q5TC04 95 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 MLIPQ5VWP3 458 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms