RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 VTCN1Q7Z7D3 282 aa10.77□□□□□ -0.68
SCN4A-201ENST00000435607 ZSWIM9Q86XI8 627 aa10.77□□□□□ -0.68
SCN4A-201ENST00000435607 OR51D1Q8NGF3 324 aa10.77□□□□□ -0.68
SCN4A-201ENST00000435607 CDKN2AIPNLQ96HQ2 116 aa10.77□□□□□ -0.68
SCN4A-201ENST00000435607 ZNF541Q9H0D2 1346 aa10.77□□□□□ -0.68
SCN4A-201ENST00000435607 MEGF6O75095 1541 aa10.77□□□□□ -0.68
SCN4A-201ENST00000435607 AOC2O75106 756 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 MT-ND1P03886 318 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 CD36P16671 472 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 NELFEP18615 380 aaKnown RBP10.77□□□□□ -0.69
SCN4A-201ENST00000435607 RAB4AP20338 218 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 EARS2Q5JPH6 523 aaKnown RBP10.77□□□□□ -0.69
SCN4A-201ENST00000435607 TRIM46Q7Z4K8 759 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 COMTD1Q86VU5 262 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 NLGN4XQ8N0W4 816 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 CDCA3Q99618 268 aaPredicted RBP10.77□□□□□ -0.69
SCN4A-201ENST00000435607 OR51I1Q9H343 314 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 RETREG1Q9H6L5 497 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 FAM118AQ9NWS6 357 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 KLHL21Q9UJP4 597 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 A0A0U1RQF3 1178 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 PIP5K1CO60331 668 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 CH25HO95992 272 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 THEGLP0DJG4 465 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 PSMA6P60900 246 aaKnown RBP10.77□□□□□ -0.69
SCN4A-201ENST00000435607 ACTA2P62736 377 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 ACTG2P63267 376 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 BCL2L15Q5TBC7 163 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 ADGRD1Q6QNK2 874 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 MRPL21Q7Z2W9 205 aaKnown RBP10.77□□□□□ -0.69
SCN4A-201ENST00000435607 ERI1Q8IV48 349 aaKnown RBP10.77□□□□□ -0.69
SCN4A-201ENST00000435607 GLYATL2Q8WU03 294 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 HSPBAP1Q96EW2 488 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 TMEM80Q96HE8 168 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 EMC3Q9P0I2 261 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 CLEC4EQ9ULY5 219 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 MADDQ8WXG6 1647 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 C2CD4BA6NLJ0 364 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 MTX2O75431 263 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 PIAS1O75925 651 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 NDUFV2P19404 249 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 ADH6P28332 368 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 TDGQ13569 410 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 PAQR3Q6TCH7 311 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 CMTM1Q8IZ96 169 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 LRRC58Q96CX6 371 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 ZNF649Q9BS31 505 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 SLCO1B3Q9NPD5 702 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 PRMT8Q9NR22 394 aaPredicted RBP10.77□□□□□ -0.69
SCN4A-201ENST00000435607 MAGED1Q9Y5V3 778 aaPredicted RBP10.77□□□□□ -0.69
SCN4A-201ENST00000435607 ABCA9Q8IUA7 1624 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 STK17BO94768 372 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 NTSR1P30989 418 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 RAB4BP61018 213 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 GPR139Q6DWJ6 353 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 NPAS3Q8IXF0 933 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 IL23AQ9NPF7 189 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 AGAP5A6NIR3 686 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 LRRN3E7EW58 273 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 CDC123O75794 336 aaPredicted RBP10.77□□□□□ -0.69
SCN4A-201ENST00000435607 SCAF4O95104 1147 aaKnown RBP10.77□□□□□ -0.69
SCN4A-201ENST00000435607 STATHP02808 62 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 LMO2P25791 158 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 MVKQ03426 396 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 SLC35F1Q5T1Q4 408 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 MEDAGQ5VYS4 303 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 TUBA3EQ6PEY2 450 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 ARL14Q8N4G2 192 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 PSD4Q8NDX1 1056 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 MCHR1Q99705 422 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 LRRN3Q9H3W5 708 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 FBXL3Q9UKT7 428 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 PLAGL1Q9UM63 463 aa10.77□□□□□ -0.69
SCN4A-201ENST00000435607 HLA-EP13747 358 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.76□□□□□ -0.69
SCN4A-201ENST00000435607 TMEM74Q96NL1 305 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 RBCK1Q9BYM8 510 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 RGCCQ9H4X1 137 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 UNKLQ9H9P5 680 aaKnown RBP10.76□□□□□ -0.69
SCN4A-201ENST00000435607 MGAT4CQ9UBM8 478 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 ANKRD30BLA7E2S9 258 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 RRADP55042 308 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 TAP2Q03519 686 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 ZNF92Q03936 586 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 LRFN4Q6PJG9 635 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 BAIAP2L2Q6UXY1 529 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 PYROXD2Q8N2H3 581 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 OR14K1Q8NGZ2 314 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 CCSER2Q9H7U1 834 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 C19orf12Q9NSK7 152 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 C17orf113A0A1B0GUU1 675 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 A0A1W2PP55 124 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 ECI2O75521 394 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 C8BP07358 591 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 EBLN1P0CF75 366 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 CD79AP11912 226 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 C5AR1P21730 350 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 NUDT1P36639 197 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 ELAVL3Q14576 367 aaKnown RBP10.76□□□□□ -0.69
SCN4A-201ENST00000435607 GPRC6AQ5T6X5 926 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms