RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 SCGNO76038 276 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 METTL3Q86U44 580 aaKnown RBP7.14□□□□□ -1.27
CPSF6-202ENST00000435070 GPALPP1Q8IXQ4 340 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 IQCF1Q8N6M8 205 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 DUSP18Q8NEJ0 188 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 ZNF578Q96N58 590 aaPredicted RBP7.14□□□□□ -1.27
CPSF6-202ENST00000435070 RIOK2Q9BVS4 552 aaKnown RBP7.14□□□□□ -1.27
CPSF6-202ENST00000435070 TTYH1Q9H313 450 aaPredicted RBP7.14□□□□□ -1.27
CPSF6-202ENST00000435070 CCL27Q9Y4X3 112 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 KCNMB2Q9Y691 235 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 COL5A3P25940 1745 aaPredicted RBP7.14□□□□□ -1.27
CPSF6-202ENST00000435070 STRCQ7RTU9 1775 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 CCDC88CQ9P219 2028 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 hCG_1807616A0A1W2PRN6 198 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 GATBO75879 557 aaKnown RBP7.14□□□□□ -1.27
CPSF6-202ENST00000435070 CRATP43155 626 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 KCNJ10P78508 379 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 DUSP6Q16828 381 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 COL28A1Q2UY09 1125 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 PGBD2Q6P3X8 592 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 LAPTM4BQ86VI4 370 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 CD200R1Q8TD46 325 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 GIMAP1Q8WWP7 306 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 SLC6A17Q9H1V8 727 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 KCMF1Q9P0J7 381 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 FZD4Q9ULV1 537 aa7.14□□□□□ -1.27
CPSF6-202ENST00000435070 C2orf78A6NCI8 922 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 MAGEB17A8MXT2 336 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 TPST2O60704 377 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 HCN1O60741 890 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 HLA-EP13747 358 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 ANXA8P13928 327 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 DARSP14868 501 aaKnown RBP7.13□□□□□ -1.27
CPSF6-202ENST00000435070 FKBP1AP62942 108 aaKnown RBP7.13□□□□□ -1.27
CPSF6-202ENST00000435070 LGALS3BPQ08380 585 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 RBBP4Q09028 425 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 MAD2L1Q13257 205 aaPredicted RBP7.13□□□□□ -1.27
CPSF6-202ENST00000435070 C10orf120Q5SQS8 335 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 C19orf48Q6RUI8 117 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 GLT6D1Q7Z4J2 308 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 CLDN19Q8N6F1 224 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 MNTQ99583 582 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 TMEM43Q9BTV4 400 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 TMED9Q9BVK6 235 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 COPZ2Q9P299 210 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 EXTL2Q9UBQ6 330 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 EEF1E1O43324 174 aaKnown RBP7.13□□□□□ -1.27
CPSF6-202ENST00000435070 PCDH7O60245 1069 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 ZNF806P0C7X5 589 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 TSPAN5P62079 268 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 BICRALQ6AI39 1079 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 TMEM175Q9BSA9 504 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 ACPTQ9BZG2 426 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 OR51J1Q9H342 316 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 PPP1R3EQ9H7J1 279 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 TPT1P8Q9HAU6 139 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 FOLH1BQ9HBA9 442 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 ELOVL2Q9NXB9 296 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 TVP23BQ9NYZ1 205 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 MGAT4BQ9UQ53 548 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 TRAV20A0A0B4J274 112 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 OR5K4A6NMS3 321 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 GABRR3A8MPY1 467 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 KHNYNO15037 678 aaKnown RBP7.13□□□□□ -1.27
CPSF6-202ENST00000435070 COX7A2P14406 83 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 PTPN6P29350 595 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 MC4RP32245 332 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 CCNJQ5T5M9 372 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 PTRHD1Q6GMV3 140 aaKnown RBP7.13□□□□□ -1.27
CPSF6-202ENST00000435070 DGLUCYQ7Z3D6 616 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 TSEN54Q7Z6J9 526 aaKnown RBP7.13□□□□□ -1.27
CPSF6-202ENST00000435070 APIPQ96GX9 242 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 MSLNLQ96KJ4 702 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 PKP4Q99569 1192 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 TSSK6Q9BXA6 273 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 SERHL2Q9H4I8 314 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 ZNF768Q9H5H4 540 aaKnown RBP7.13□□□□□ -1.27
CPSF6-202ENST00000435070 TEX13CA0A0J9YWL9 993 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 SLC28A1O00337 649 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 MANBAO00462 879 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 RHCEP18577 417 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 ACVRL1P37023 503 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 GPR17Q13304 367 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 NCF4Q15080 339 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 SF3A2Q15428 464 aaKnown RBP7.13□□□□□ -1.27
CPSF6-202ENST00000435070 PLPP6Q8IY26 295 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 FANK1Q8TC84 345 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 KCTD13Q8WZ19 329 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 UCN3Q969E3 161 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 SCRN2Q96FV2 425 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 EPYCQ99645 322 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 IGFLR1Q9H665 355 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 ERAP1Q9NZ08 941 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 DNAH12Q6ZR08 3092 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 TLR4O00206 839 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 B4GALT3O60512 393 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 GMDSO60547 372 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 GASTP01350 101 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 HOXB8P17481 243 aaPredicted RBP7.13□□□□□ -1.27
CPSF6-202ENST00000435070 IL1RNP18510 177 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms