RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 PLA2G15Q8NCC3 412 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 FAM46DQ8NEK8 389 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 OR9Q2Q8NGE9 314 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 HERVK_113Q902F9 699 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 ITPKCQ96DU7 683 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 TMEM19Q96HH6 336 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 Q96MT0 163 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 ASB16Q96NS5 453 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 DACH2Q96NX9 599 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 ACAT2Q9BWD1 397 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 RAB11FIP5Q9BXF6 653 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 CDCA4Q9BXL8 241 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 ZNF717Q9BY31 904 aaPredicted RBP9.92□□□□□ -0.82
CD44-210ENST00000434472 UCK2Q9BZX2 261 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 SLIRPQ9GZT3 109 aaKnown RBP9.92□□□□□ -0.82
CD44-210ENST00000434472 NMNAT1Q9HAN9 279 aaPredicted RBP9.92□□□□□ -0.82
CD44-210ENST00000434472 PRSS16Q9NQE7 514 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 TAS2R7Q9NYW3 318 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 CCDC59Q9P031 241 aaKnown RBP9.92□□□□□ -0.82
CD44-210ENST00000434472 FTSJ1Q9UET6 329 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 KIAA1549LQ6ZVL6 1849 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 DOCK6Q96HP0 2047 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 SAGE2PA6NJ88 616 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 J3KTA2 159 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 TOR1BO14657 336 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 KCNJ13O60928 360 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 CLEC3AO75596 197 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 MFN2O95140 757 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 BCHEP06276 602 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 EPHX1P07099 455 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 BMP4P12644 408 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 OSMP13725 252 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 LIPAP38571 399 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 GSSP48637 474 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 PPP5CP53041 499 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 UGT2B15P54855 530 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 CYP4F2P78329 520 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 RELAQ04206 551 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 DMPKQ09013 629 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 ST3GAL4Q11206 333 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 CAMK1Q14012 370 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 GNA13Q14344 377 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 PTGES3Q15185 160 aaKnown RBP9.91□□□□□ -0.82
CD44-210ENST00000434472 ZNF404Q494X3 552 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 TMEM35AQ53FP2 167 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 DCST1Q5T197 706 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 PIP5KL1Q5T9C9 394 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 FRMPD2BQ6IN97 320 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 PTCHD4Q6ZW05 846 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 KRT73Q86Y46 540 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 ADGRF3Q8IZF5 1079 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 C2orf73Q8N5S3 287 aaPredicted RBP9.91□□□□□ -0.82
CD44-210ENST00000434472 ANKRD53Q8N9V6 530 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 SLC38A5Q8WUX1 472 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 GTPBP3Q969Y2 492 aaKnown RBP9.91□□□□□ -0.82
CD44-210ENST00000434472 ARMC5Q96C12 935 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 DHRS1Q96LJ7 313 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 ZNF354BQ96LW1 612 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 SPATA5L1Q9BVQ7 753 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 FAIM2Q9BWQ8 316 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 SORBS1Q9BX66 1292 aaKnown RBP9.91□□□□□ -0.82
CD44-210ENST00000434472 DSN1Q9H410 356 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 DDX31Q9H8H2 851 aaKnown RBP9.91□□□□□ -0.82
CD44-210ENST00000434472 IRAK4Q9NWZ3 460 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 CHCHD3Q9NX63 227 aaKnown RBP9.91□□□□□ -0.82
CD44-210ENST00000434472 EHD3Q9NZN3 535 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 P2RX2Q9UBL9 471 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 SLC23A2Q9UGH3 650 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.91□□□□□ -0.82
CD44-210ENST00000434472 PRKAB1Q9Y478 270 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 KLK4Q9Y5K2 254 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 PMF1-BGLAPU3KQ54 211 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 DENND4AQ7Z401 1863 aa9.91□□□□□ -0.82
CD44-210ENST00000434472 ISPDA4D126 451 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 METTL15A6NJ78 407 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 GUCY1B2O75343 617 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 GASTP01350 101 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 STSP08842 583 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 ADORA3P0DMS8 318 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 PORP16435 677 aaPredicted RBP9.9□□□□□ -0.82
CD44-210ENST00000434472 GADD45AP24522 165 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 PPP2R1BP30154 601 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 IL12RB1P42701 662 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 KCNJ5P48544 419 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 CCT3P49368 545 aaKnown RBP9.9□□□□□ -0.82
CD44-210ENST00000434472 PSMD7P51665 324 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 ARFIP1P53367 373 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 SNRPGP62308 76 aaKnown RBP9.9□□□□□ -0.82
CD44-210ENST00000434472 MESP2Q0VG99 397 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 ILKQ13418 452 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 GANABQ14697 944 aaKnown RBP9.9□□□□□ -0.82
CD44-210ENST00000434472 SYT16Q17RD7 645 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 WSCD2Q2TBF2 565 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 ARMCX4Q5H9R4 360 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 MEDAGQ5VYS4 303 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 OR4C11Q6IEV9 310 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 ZNF770Q6IQ21 691 aaPredicted RBP9.9□□□□□ -0.82
CD44-210ENST00000434472 KIAA1161Q6NSJ0 714 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 TNFAIP8L2Q6P589 184 aaPredicted RBP9.9□□□□□ -0.82
CD44-210ENST00000434472 FBXO46Q6PJ61 603 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms