RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 TP53TG5Q9Y2B4 290 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 TRAF6Q9Y4K3 522 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 ATG4BQ9Y4P1 393 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 IGSF10Q6WRI0 2623 aa14.57□□□□□ -0.08
TREX1-201ENST00000433541 HMGB1P1B2RPK0 211 aaPredicted RBP14.56□□□□□ -0.08
TREX1-201ENST00000433541 KLHL41O60662 606 aa14.56□□□□□ -0.08
TREX1-201ENST00000433541 SEC22BO75396 215 aa14.56□□□□□ -0.08
TREX1-201ENST00000433541 PRKRAO75569 313 aaKnown RBP14.56□□□□□ -0.08
TREX1-201ENST00000433541 LINC00032P0C843 101 aa14.56□□□□□ -0.08
TREX1-201ENST00000433541 DHRS4L1P0CG22 281 aa14.56□□□□□ -0.08
TREX1-201ENST00000433541 COX7A2P14406 83 aa14.56□□□□□ -0.08
TREX1-201ENST00000433541 TPP2P29144 1249 aaPredicted RBP14.56□□□□□ -0.08
TREX1-201ENST00000433541 SLC1A6P48664 564 aa14.56□□□□□ -0.08
TREX1-201ENST00000433541 GALNT1Q10472 559 aaPredicted RBP14.56□□□□□ -0.08
TREX1-201ENST00000433541 SERTAD2Q14140 314 aa14.56□□□□□ -0.08
TREX1-201ENST00000433541 LACTB2Q53H82 288 aaPredicted RBP14.56□□□□□ -0.08
TREX1-201ENST00000433541 TTMPQ5BVD1 217 aa14.56□□□□□ -0.08
TREX1-201ENST00000433541 KANK2Q63ZY3 851 aa14.56□□□□□ -0.08
TREX1-201ENST00000433541 TRIM42Q8IWZ5 723 aa14.56□□□□□ -0.08
TREX1-201ENST00000433541 OR4N5Q8IXE1 308 aa14.56□□□□□ -0.08
TREX1-201ENST00000433541 EXD3Q8N9H8 876 aa14.56□□□□□ -0.08
TREX1-201ENST00000433541 FDCSPQ8NFU4 85 aa14.56□□□□□ -0.08
TREX1-201ENST00000433541 TANKQ92844 425 aa14.56□□□□□ -0.08
TREX1-201ENST00000433541 WBP1Q96G27 269 aa14.56□□□□□ -0.08
TREX1-201ENST00000433541 APIPQ96GX9 242 aa14.56□□□□□ -0.08
TREX1-201ENST00000433541 FAIM2Q9BWQ8 316 aa14.56□□□□□ -0.08
TREX1-201ENST00000433541 ALOXE3Q9BYJ1 711 aa14.56□□□□□ -0.08
TREX1-201ENST00000433541 LHPPQ9H008 270 aa14.56□□□□□ -0.08
TREX1-201ENST00000433541 PFDN4Q9NQP4 134 aa14.56□□□□□ -0.08
TREX1-201ENST00000433541 TEX10Q9NXF1 929 aaPredicted RBP14.56□□□□□ -0.08
TREX1-201ENST00000433541 TUBD1Q9UJT1 453 aa14.56□□□□□ -0.08
TREX1-201ENST00000433541 PTGDR2Q9Y5Y4 395 aa14.56□□□□□ -0.08
TREX1-201ENST00000433541 TCRBV16S1A1N1A0A5B0 115 aa14.55□□□□□ -0.08
TREX1-201ENST00000433541 SYNDIG1LA6NDD5 238 aa14.55□□□□□ -0.08
TREX1-201ENST00000433541 PIP5K1BO14986 540 aa14.55□□□□□ -0.08
TREX1-201ENST00000433541 PROM1O43490 865 aa14.55□□□□□ -0.08
TREX1-201ENST00000433541 ITM2AO43736 263 aa14.55□□□□□ -0.08
TREX1-201ENST00000433541 DYRK3O43781 588 aa14.55□□□□□ -0.08
TREX1-201ENST00000433541 OR10H2O60403 315 aa14.55□□□□□ -0.08
TREX1-201ENST00000433541 CTNSO60931 367 aa14.55□□□□□ -0.08
TREX1-201ENST00000433541 RSL1D1O76021 490 aaKnown RBP14.55□□□□□ -0.08
TREX1-201ENST00000433541 AIFM1O95831 613 aa14.55□□□□□ -0.08
TREX1-201ENST00000433541 NR1D1P20393 614 aa14.55□□□□□ -0.08
TREX1-201ENST00000433541 PIK3R1P27986 724 aa14.55□□□□□ -0.08
TREX1-201ENST00000433541 FOLH1Q04609 750 aa14.55□□□□□ -0.08
TREX1-201ENST00000433541 TBL3Q12788 808 aaKnown RBP14.55□□□□□ -0.08
TREX1-201ENST00000433541 MYBPC3Q14896 1274 aa14.55□□□□□ -0.08
TREX1-201ENST00000433541 EXT1Q16394 746 aa14.55□□□□□ -0.08
TREX1-201ENST00000433541 GALNTL6Q49A17 601 aa14.55□□□□□ -0.08
TREX1-201ENST00000433541 NDUFAF5Q5TEU4 345 aa14.55□□□□□ -0.08
TREX1-201ENST00000433541 C6orf163Q5TEZ5 329 aa14.55□□□□□ -0.08
TREX1-201ENST00000433541 AGAP7PQ5VUJ5 663 aa14.55□□□□□ -0.08
TREX1-201ENST00000433541 ATG16L1Q676U5 607 aa14.55□□□□□ -0.08
TREX1-201ENST00000433541 OR52E8Q6IFG1 317 aa14.55□□□□□ -0.08
TREX1-201ENST00000433541 ASB18Q6ZVZ8 466 aa14.55□□□□□ -0.08
TREX1-201ENST00000433541 SCUBE1Q8IWY4 988 aa14.55□□□□□ -0.08
TREX1-201ENST00000433541 SIRT6Q8N6T7 355 aa14.55□□□□□ -0.08
TREX1-201ENST00000433541 CHTF18Q8WVB6 975 aa14.55□□□□□ -0.08
TREX1-201ENST00000433541 AGAP4Q96P64 663 aa14.55□□□□□ -0.08
TREX1-201ENST00000433541 DGAT2Q96PD7 388 aa14.55□□□□□ -0.08
TREX1-201ENST00000433541 ILKAPQ9H0C8 392 aaPredicted RBP14.55□□□□□ -0.08
TREX1-201ENST00000433541 SLC25A18Q9H1K4 315 aa14.55□□□□□ -0.08
TREX1-201ENST00000433541 KCNK13Q9HB14 408 aa14.55□□□□□ -0.08
TREX1-201ENST00000433541 MCM8Q9UJA3 840 aa14.55□□□□□ -0.08
TREX1-201ENST00000433541 POLR3HQ9Y535 204 aaPredicted RBP14.55□□□□□ -0.08
TREX1-201ENST00000433541 ASB4Q9Y574 426 aa14.55□□□□□ -0.08
TREX1-201ENST00000433541 DNAJC15Q9Y5T4 150 aa14.55□□□□□ -0.08
TREX1-201ENST00000433541 CLCA3PQ9Y6N3 262 aa14.55□□□□□ -0.08
TREX1-201ENST00000433541 IGKV3D-11A0A0A0MRZ8 115 aa14.54□□□□□ -0.08
TREX1-201ENST00000433541 A0A1W2PR48 441 aa14.54□□□□□ -0.08
TREX1-201ENST00000433541 A8MUI8 341 aa14.54□□□□□ -0.08
TREX1-201ENST00000433541 FGF17O60258 216 aa14.54□□□□□ -0.08
TREX1-201ENST00000433541 SERPINA7P05543 415 aa14.54□□□□□ -0.08
TREX1-201ENST00000433541 CELA2AP08217 269 aa14.54□□□□□ -0.08
TREX1-201ENST00000433541 ANXA4P09525 319 aaPredicted RBP14.54□□□□□ -0.08
TREX1-201ENST00000433541 PRR35P0CG20 571 aa14.54□□□□□ -0.08
TREX1-201ENST00000433541 TIA1P31483 386 aaKnown RBP eCLIP14.54□□□□□ -0.08
TREX1-201ENST00000433541 SLC18A1P54219 525 aa14.54□□□□□ -0.08
TREX1-201ENST00000433541 WDR4P57081 412 aaKnown RBP14.54□□□□□ -0.08
TREX1-201ENST00000433541 TAS2R50P59544 299 aa14.54□□□□□ -0.08
TREX1-201ENST00000433541 PLIN5Q00G26 463 aa14.54□□□□□ -0.08
TREX1-201ENST00000433541 NFATC3Q12968 1075 aa14.54□□□□□ -0.08
TREX1-201ENST00000433541 PDCD2Q16342 344 aaPredicted RBP14.54□□□□□ -0.08
TREX1-201ENST00000433541 HSP90B2PQ58FF3 399 aa14.54□□□□□ -0.08
TREX1-201ENST00000433541 VWA5B1Q5TIE3 1220 aa14.54□□□□□ -0.08
TREX1-201ENST00000433541 MRM1Q6IN84 353 aaKnown RBP14.54□□□□□ -0.08
TREX1-201ENST00000433541 TRIM46Q7Z4K8 759 aa14.54□□□□□ -0.08
TREX1-201ENST00000433541 RBM18Q96H35 190 aaKnown RBP14.54□□□□□ -0.08
TREX1-201ENST00000433541 PPP1R36Q96LQ0 422 aa14.54□□□□□ -0.08
TREX1-201ENST00000433541 SH3GL2Q99962 352 aa14.54□□□□□ -0.08
TREX1-201ENST00000433541 NUDT9Q9BW91 350 aa14.54□□□□□ -0.08
TREX1-201ENST00000433541 EPS8L2Q9H6S3 715 aa14.54□□□□□ -0.08
TREX1-201ENST00000433541 LRTM1Q9HBL6 345 aa14.54□□□□□ -0.08
TREX1-201ENST00000433541 ADAP2Q9NPF8 381 aa14.54□□□□□ -0.08
TREX1-201ENST00000433541 C1orf109Q9NX04 203 aa14.54□□□□□ -0.08
TREX1-201ENST00000433541 PTGFRNQ9P2B2 879 aa14.54□□□□□ -0.08
TREX1-201ENST00000433541 ZDHHC2Q9UIJ5 367 aa14.54□□□□□ -0.08
TREX1-201ENST00000433541 RAP2CQ9Y3L5 183 aa14.54□□□□□ -0.08
TREX1-201ENST00000433541 ZNF451Q9Y4E5 1061 aa14.54□□□□□ -0.08
TREX1-201ENST00000433541 PCDHGA9Q9Y5G4 932 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms