RNA–Protein interactions for RNA: ENST00000432945.1

HMGN1P33-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 33, humanhuman

BASIC

Gene HMGN1P33, Length 451 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P33-201ENST00000432945 COL27A1Q8IZC6 1860 aaPredicted RBP0.83□□□□□ -2.28
HMGN1P33-201ENST00000432945 CDK5RAP2Q96SN8 1893 aa0.83□□□□□ -2.28
HMGN1P33-201ENST00000432945 TNXBP22105 4242 aa0.83□□□□□ -2.28
HMGN1P33-201ENST00000432945 DOCK10Q96BY6 2186 aa0.83□□□□□ -2.28
HMGN1P33-201ENST00000432945 DOCK2Q92608 1830 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 DOCK8Q8NF50 2099 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 CPSF1Q10570 1443 aaKnown RBP0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 MTCL1Q9Y4B5 1905 aaKnown RBP0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 FREM1Q5H8C1 2179 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 BCLAF3A2AJT9 711 aaKnown RBP0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 ANKUB1A6NFN9 424 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 NKX6-3A6NJ46 265 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 TRIM49D1C9J1S8 452 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 IFRD1O00458 451 aaPredicted RBP0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 TBX10O75333 385 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 LRCH4O75427 683 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 RNASEH2AO75792 299 aaKnown RBP0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 NXPH4O95158 308 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 RTN3O95197 1032 aaPredicted RBP0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 SCGB1D1O95968 90 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 DCNP07585 359 aaKnown RBP0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 HOXC4P09017 264 aaPredicted RBP0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 HMGB1P09429 215 aaKnown RBP0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 IRF2P14316 349 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 GPR183P32249 361 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 MATKP42679 507 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 KHKP50053 298 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 CASP6P55212 293 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 CDH8P55286 799 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 TPD52P55327 224 aaPredicted RBP0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 WNT4P56705 351 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 RIPK4P57078 832 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 B3GALT5-AS1P59052 145 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 DCDC1P59894 354 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 NDPQ00604 133 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 PRKCEQ02156 737 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 DMTNQ08495 405 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 OVGP1Q12889 678 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 TRAP1Q12931 704 aaKnown RBP0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 MAMLD1Q13495 774 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 TMEM132DQ14C87 1099 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 MED22Q15528 200 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 ZRSR2Q15696 482 aaKnown RBP0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 TBCEQ15813 527 aaPredicted RBP0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 C15orf59Q2T9L4 293 aaPredicted RBP0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 KRTAP19-6Q3LI70 58 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 LINC00303Q3SY05 128 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 LINC00242Q5T6M2 205 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 C16orf47Q6ZP98 133 aaPredicted RBP0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 IQCHQ86VS3 1027 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 SMAP1Q8IYB5 467 aaPredicted RBP0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 LGI2Q8N0V4 545 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 RNF175Q8N4F7 328 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 TTC30BQ8N4P2 665 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 C11orf42Q8N5U0 333 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 OR11H4Q8NGC9 324 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 C11orf45Q8TAV5 145 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 ZNF564Q8TBZ8 553 aaPredicted RBP0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 RFFLQ8WZ73 363 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 CNRIP1Q96F85 164 aaPredicted RBP0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 SLC39A13Q96H72 371 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 CFAP57Q96MR6 1250 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 C7orf26Q96N11 449 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 WDFY2Q96P53 400 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 EBF4Q9BQW3 602 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 C16orf70Q9BSU1 422 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 PRRG4Q9BZD6 226 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 SHARPINQ9H0F6 387 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 OSGEPL1Q9H4B0 414 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 SMARCAD1Q9H4L7 1026 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 UBN1Q9NPG3 1134 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 IRAK4Q9NWZ3 460 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 PDP2Q9P2J9 529 aa0.82□□□□□ -2.28
HMGN1P33-201ENST00000432945 ATG2AQ2TAZ0 1938 aa0.81□□□□□ -2.28
HMGN1P33-201ENST00000432945 NUP98P52948 1817 aa0.81□□□□□ -2.28
HMGN1P33-201ENST00000432945 WI2-2373I1.2A0A1W2PRP0 233 aa0.81□□□□□ -2.28
HMGN1P33-201ENST00000432945 LNP1A1A4G5 178 aa0.81□□□□□ -2.28
HMGN1P33-201ENST00000432945 A6NLC8 198 aa0.81□□□□□ -2.28
HMGN1P33-201ENST00000432945 TCP10L2B9ZVM9 353 aa0.81□□□□□ -2.28
HMGN1P33-201ENST00000432945 MEIS2O14770 477 aa0.81□□□□□ -2.28
HMGN1P33-201ENST00000432945 TNFSF11O14788 317 aa0.81□□□□□ -2.28
HMGN1P33-201ENST00000432945 INPP4BO15327 924 aa0.81□□□□□ -2.28
HMGN1P33-201ENST00000432945 TGFB1I1O43294 461 aa0.81□□□□□ -2.28
HMGN1P33-201ENST00000432945 KRT6AP02538 564 aa0.81□□□□□ -2.28
HMGN1P33-201ENST00000432945 KRT6BP04259 564 aa0.81□□□□□ -2.28
HMGN1P33-201ENST00000432945 CLTBP09497 229 aa0.81□□□□□ -2.28
HMGN1P33-201ENST00000432945 ALOX5P09917 674 aa0.81□□□□□ -2.28
HMGN1P33-201ENST00000432945 ZNF853P0CG23 659 aa0.81□□□□□ -2.28
HMGN1P33-201ENST00000432945 ODC1P11926 461 aa0.81□□□□□ -2.28
HMGN1P33-201ENST00000432945 GLULP15104 373 aa0.81□□□□□ -2.28
HMGN1P33-201ENST00000432945 RPS2P15880 293 aaKnown RBP0.81□□□□□ -2.28
HMGN1P33-201ENST00000432945 ZNF19P17023 458 aa0.81□□□□□ -2.28
HMGN1P33-201ENST00000432945 KRT6CP48668 564 aa0.81□□□□□ -2.28
HMGN1P33-201ENST00000432945 ERVPABLB-1P60509 514 aa0.81□□□□□ -2.28
HMGN1P33-201ENST00000432945 CXCL9Q07325 125 aa0.81□□□□□ -2.28
HMGN1P33-201ENST00000432945 SRSF9Q13242 221 aaKnown RBP eCLIP0.81□□□□□ -2.28
HMGN1P33-201ENST00000432945 GCKRQ14397 625 aa0.81□□□□□ -2.28
HMGN1P33-201ENST00000432945 OPCMLQ14982 345 aa0.81□□□□□ -2.28
HMGN1P33-201ENST00000432945 TCEAL5Q5H9L2 206 aa0.81□□□□□ -2.28
HMGN1P33-201ENST00000432945 CELF3Q5SZQ8 465 aaKnown RBP0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms