RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 HEXBP07686 556 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 PRPS1L1P21108 318 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 PTPN4P29074 926 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 MRPL19P49406 292 aaKnown RBP10.36□□□□□ -0.75
CHD4-202ENST00000430771 ATP4BP51164 291 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 DIO3P55073 304 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 C21orf58P58505 322 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 ACTN3Q08043 901 aaPredicted RBP10.36□□□□□ -0.75
CHD4-202ENST00000430771 C2orf80Q0P641 193 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 SLC13A2Q13183 592 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 PTGR1Q14914 329 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 DPY19L1Q2PZI1 675 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 VWA2Q5GFL6 755 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 METTL21CQ5VZV1 264 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 C18orf63Q68DL7 685 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 FAM71E1Q6IPT2 247 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 SLC48A1Q6P1K1 146 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 RAB43Q86YS6 212 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 SCUBE1Q8IWY4 988 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 PRSS58Q8IYP2 241 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 SAMD14Q8IZD0 417 aaPredicted RBP10.36□□□□□ -0.75
CHD4-202ENST00000430771 MIER2Q8N344 545 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 CLHC1Q8NHS4 586 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 METTL21AQ8WXB1 218 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 TANKQ92844 425 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 KLHL29Q96CT2 875 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 MTERF3Q96E29 417 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 VPS50Q96JG6 964 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 CATSPER2Q96P56 530 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 ZBTB18Q99592 522 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 PRPF18Q99633 342 aaKnown RBP10.36□□□□□ -0.75
CHD4-202ENST00000430771 ELAC2Q9BQ52 826 aaKnown RBP10.36□□□□□ -0.75
CHD4-202ENST00000430771 PELOQ9BRX2 385 aaKnown RBP10.36□□□□□ -0.75
CHD4-202ENST00000430771 DPY30Q9C005 99 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 RABEP2Q9H5N1 569 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 REEP4Q9H6H4 257 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 KCNK13Q9HB14 408 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 LANCL2Q9NS86 450 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 SEMA3GQ9NS98 782 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 ATAD3AQ9NVI7 634 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 ZIM2Q9NZV7 527 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 PSME2Q9UL46 239 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 TCFL5Q9UL49 500 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 MKL2Q9ULH7 1088 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 FARSAQ9Y285 508 aaKnown RBP10.36□□□□□ -0.75
CHD4-202ENST00000430771 SEC16AO15027 2179 aa10.36□□□□□ -0.75
CHD4-202ENST00000430771 TMEM8BA6NDV4 472 aa10.35□□□□□ -0.75
CHD4-202ENST00000430771 IDSB3KWA1 339 aa10.35□□□□□ -0.75
CHD4-202ENST00000430771 TERTO14746 1132 aaKnown RBP10.35□□□□□ -0.75
CHD4-202ENST00000430771 TBX19O60806 448 aa10.35□□□□□ -0.75
CHD4-202ENST00000430771 CNOT3O75175 753 aaKnown RBP10.35□□□□□ -0.75
CHD4-202ENST00000430771 JRKO75564 520 aa10.35□□□□□ -0.75
CHD4-202ENST00000430771 PRKRAO75569 313 aaKnown RBP10.35□□□□□ -0.75
CHD4-202ENST00000430771 LRATO95237 230 aa10.35□□□□□ -0.75
CHD4-202ENST00000430771 FURINP09958 794 aa10.35□□□□□ -0.75
CHD4-202ENST00000430771 C8orf89P0DMQ9 161 aa10.35□□□□□ -0.75
CHD4-202ENST00000430771 COX7A2P14406 83 aa10.35□□□□□ -0.75
CHD4-202ENST00000430771 TACR1P25103 407 aa10.35□□□□□ -0.75
CHD4-202ENST00000430771 PIK3R1P27986 724 aa10.35□□□□□ -0.75
CHD4-202ENST00000430771 NTSP30990 170 aa10.35□□□□□ -0.75
CHD4-202ENST00000430771 CLDN8P56748 225 aa10.35□□□□□ -0.75
CHD4-202ENST00000430771 PLIN5Q00G26 463 aa10.35□□□□□ -0.75
CHD4-202ENST00000430771 MC1RQ01726 317 aa10.35□□□□□ -0.75
CHD4-202ENST00000430771 STX4Q12846 297 aa10.35□□□□□ -0.75
CHD4-202ENST00000430771 CLN3Q13286 438 aa10.35□□□□□ -0.75
CHD4-202ENST00000430771 BIKQ13323 160 aa10.35□□□□□ -0.75
CHD4-202ENST00000430771 SERTAD2Q14140 314 aa10.35□□□□□ -0.75
CHD4-202ENST00000430771 C6orf163Q5TEZ5 329 aa10.35□□□□□ -0.75
CHD4-202ENST00000430771 GKAP1Q5VSY0 366 aaPredicted RBP10.35□□□□□ -0.75
CHD4-202ENST00000430771 TMEM198Q66K66 360 aa10.35□□□□□ -0.75
CHD4-202ENST00000430771 UNQ6494/PRO21346Q6UXR6 183 aa10.35□□□□□ -0.75
CHD4-202ENST00000430771 CLNKQ7Z7G1 428 aa10.35□□□□□ -0.75
CHD4-202ENST00000430771 NATD1Q8N6N6 113 aa10.35□□□□□ -0.75
CHD4-202ENST00000430771 GLB1L3Q8NCI6 653 aaPredicted RBP10.35□□□□□ -0.75
CHD4-202ENST00000430771 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.35□□□□□ -0.75
CHD4-202ENST00000430771 PPCDCQ96CD2 204 aa10.35□□□□□ -0.75
CHD4-202ENST00000430771 MARK4Q96L34 752 aa10.35□□□□□ -0.75
CHD4-202ENST00000430771 PTCHD1Q96NR3 888 aa10.35□□□□□ -0.75
CHD4-202ENST00000430771 TMEM121BQ9BXQ6 578 aaPredicted RBP10.35□□□□□ -0.75
CHD4-202ENST00000430771 DPH1Q9BZG8 443 aa10.35□□□□□ -0.75
CHD4-202ENST00000430771 VN1R1Q9GZP7 353 aa10.35□□□□□ -0.75
CHD4-202ENST00000430771 ACTL8Q9H568 366 aa10.35□□□□□ -0.75
CHD4-202ENST00000430771 AKIRIN1Q9H9L7 192 aaPredicted RBP10.35□□□□□ -0.75
CHD4-202ENST00000430771 SDR39U1Q9NRG7 319 aaPredicted RBP10.35□□□□□ -0.75
CHD4-202ENST00000430771 HEY2Q9UBP5 337 aa10.35□□□□□ -0.75
CHD4-202ENST00000430771 C3orf18Q9UK00 162 aa10.35□□□□□ -0.75
CHD4-202ENST00000430771 UTS2RQ9UKP6 389 aa10.35□□□□□ -0.75
CHD4-202ENST00000430771 AHCTF1Q8WYP5 2266 aa10.35□□□□□ -0.75
CHD4-202ENST00000430771 GLOD5A6NK44 160 aa10.34□□□□□ -0.75
CHD4-202ENST00000430771 PDPK1O15530 556 aa10.34□□□□□ -0.75
CHD4-202ENST00000430771 RRP8O43159 456 aaKnown RBP10.34□□□□□ -0.75
CHD4-202ENST00000430771 AKAP10O43572 662 aa10.34□□□□□ -0.75
CHD4-202ENST00000430771 TLX3O43711 291 aaPredicted RBP10.34□□□□□ -0.75
CHD4-202ENST00000430771 FGF17O60258 216 aa10.34□□□□□ -0.75
CHD4-202ENST00000430771 CCDC22O60826 627 aa10.34□□□□□ -0.75
CHD4-202ENST00000430771 CTNSO60931 367 aa10.34□□□□□ -0.75
CHD4-202ENST00000430771 DNAJB6O75190 326 aa10.34□□□□□ -0.75
CHD4-202ENST00000430771 ALOX12BO75342 701 aa10.34□□□□□ -0.75
CHD4-202ENST00000430771 KLF7O75840 302 aaPredicted RBP10.34□□□□□ -0.75
CHD4-202ENST00000430771 LIFP15018 202 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms