RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 LKAAEAR1Q8TD35 194 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 PDLIM5Q96HC4 596 aaKnown RBP12.35□□□□□ -0.43
PTCH1-207ENST00000429896 ELF4Q99607 663 aaPredicted RBP12.35□□□□□ -0.43
PTCH1-207ENST00000429896 DEFB126Q9BYW3 111 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 PLEKHM1Q9Y4G2 1056 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 IL7RP16871 459 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 DCAF12Q5T6F0 453 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 NKAIN2Q5VXU1 208 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 MOAP1Q96BY2 351 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 TAPBPLQ9BX59 468 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 KCNN2Q9H2S1 579 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 MUC13Q9H3R2 512 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 CTPS2Q9NRF8 586 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 R4GN57 208 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 TMEM202A6NGA9 273 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 TLDC1Q6P9B6 456 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 OR8K5Q8NH50 307 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 METTL7AQ9H8H3 244 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 I6L893 689 aaPredicted RBP12.34□□□□□ -0.43
PTCH1-207ENST00000429896 UGT2B7P16662 529 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 GNALP38405 381 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 ABRAXAS2Q15018 415 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 TMEM198Q66K66 360 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 GLYATQ6IB77 296 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 FBXW8Q8N3Y1 598 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 C10orf82Q8WW14 230 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 ZNF395Q9H8N7 513 aaPredicted RBP12.34□□□□□ -0.43
PTCH1-207ENST00000429896 C11orf16Q9NQ32 467 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 P2RX2Q9UBL9 471 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 ZNF432O94892 652 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 CD247P20963 164 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 GMPRP36959 345 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 DSTNP60981 165 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 OR52B2Q96RD2 323 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 TXLNGYQ9BZA5 131 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 RPF2Q9H7B2 306 aaKnown RBP12.34□□□□□ -0.43
PTCH1-207ENST00000429896 PRDM6Q9NQX0 595 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 CDKL1Q00532 357 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 IL18Q14116 193 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 GPR18Q14330 331 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 FAM131AQ6UXB0 335 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 ZNF683Q8IZ20 524 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 IFI44Q8TCB0 444 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 TEFMQ96QE5 360 aaKnown RBP12.34□□□□□ -0.43
PTCH1-207ENST00000429896 OR51B4Q9Y5P0 310 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 DRD2P14416 443 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 AHCYP23526 432 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 UFM1P61960 85 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 DLG1Q12959 904 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 BROXQ5VW32 411 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 ATCAYQ86WG3 371 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 PGAM4Q8N0Y7 254 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 OR10A6Q8NH74 314 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 ZNF480Q8WV37 535 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 ZUFSPQ96AP4 578 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 AP1M2Q9Y6Q5 423 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 UBE2QL1A1L167 161 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 CASKO14936 926 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 SMAD9O15198 467 aaKnown RBP12.34□□□□□ -0.43
PTCH1-207ENST00000429896 SCELO95171 688 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 PVRP15151 417 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 MAGEA3P43357 314 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 SHC2P98077 582 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 KANK2Q63ZY3 851 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 LPCAT4Q643R3 524 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 FBXO42Q6P3S6 717 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 CDHR3Q6ZTQ4 885 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 KCTD8Q6ZWB6 473 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 TECPR1Q7Z6L1 1165 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 CHID1Q9BWS9 393 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 STARD5Q9NSY2 213 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 DOCK3Q8IZD9 2030 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 ANHXE9PGG2 379 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 SCDO00767 359 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 C6orf47O95873 294 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 INHBCP55103 352 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 CTC1Q2NKJ3 1217 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 CYP27C1Q4G0S4 372 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 LIN54Q6MZP7 749 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 CXXC5Q7LFL8 322 aaKnown RBP12.34□□□□□ -0.43
PTCH1-207ENST00000429896 C19orf47Q8N9M1 422 aaKnown RBP12.34□□□□□ -0.43
PTCH1-207ENST00000429896 OR52B6Q8NGF0 335 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 NEIL2Q969S2 332 aa12.34□□□□□ -0.43
PTCH1-207ENST00000429896 RBMX2Q9Y388 322 aaKnown RBP12.34□□□□□ -0.43
PTCH1-207ENST00000429896 WWP2O00308 870 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 CHN2P52757 468 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 SCARB2Q14108 478 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 PDK3Q15120 406 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 QPRTQ15274 297 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 TTC23Q5W5X9 447 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 FRRS1Q6ZNA5 592 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 OR5M3Q8NGP4 307 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 KLHL6Q8WZ60 621 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 CLPTM1LQ96KA5 538 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 TAS2R9Q9NYW1 312 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 MYO9BQ13459 2157 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 TRBC2A0A5B9 178 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 XIAPP98170 497 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 CBX3Q13185 183 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 TAB1Q15750 504 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms