RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 LRRN1Q6UXK5 716 aa13.84□□□□□ -0.19
SYNGAP1-203ENST00000428982 LARP4Q71RC2 724 aaKnown RBP eCLIP13.84□□□□□ -0.19
SYNGAP1-203ENST00000428982 AKR7LQ8NHP1 331 aa13.84□□□□□ -0.19
SYNGAP1-203ENST00000428982 MOSPD2Q8NHP6 518 aa13.84□□□□□ -0.19
SYNGAP1-203ENST00000428982 NSMAFQ92636 917 aa13.84□□□□□ -0.19
SYNGAP1-203ENST00000428982 TADA1Q96BN2 335 aa13.84□□□□□ -0.19
SYNGAP1-203ENST00000428982 ZNF599Q96NL3 588 aa13.84□□□□□ -0.19
SYNGAP1-203ENST00000428982 WDR77Q9BQA1 342 aaPredicted RBP13.84□□□□□ -0.19
SYNGAP1-203ENST00000428982 GSTO2Q9H4Y5 243 aa13.84□□□□□ -0.19
SYNGAP1-203ENST00000428982 CTSFQ9UBX1 484 aa13.84□□□□□ -0.19
SYNGAP1-203ENST00000428982 A0A1B0GVI7 797 aa13.84□□□□□ -0.19
SYNGAP1-203ENST00000428982 SULT1C2O00338 296 aa13.84□□□□□ -0.19
SYNGAP1-203ENST00000428982 BEST1O76090 585 aa13.84□□□□□ -0.19
SYNGAP1-203ENST00000428982 STSP08842 583 aa13.84□□□□□ -0.19
SYNGAP1-203ENST00000428982 ZNF7P17097 686 aaPredicted RBP13.84□□□□□ -0.19
SYNGAP1-203ENST00000428982 TGFBR2P37173 567 aa13.84□□□□□ -0.19
SYNGAP1-203ENST00000428982 DCTP40126 519 aa13.84□□□□□ -0.19
SYNGAP1-203ENST00000428982 ARFIP1P53367 373 aa13.84□□□□□ -0.19
SYNGAP1-203ENST00000428982 VSX2P58304 361 aaPredicted RBP13.84□□□□□ -0.19
SYNGAP1-203ENST00000428982 HOXC5Q00444 222 aa13.84□□□□□ -0.19
SYNGAP1-203ENST00000428982 AVPI1Q5T686 147 aa13.84□□□□□ -0.19
SYNGAP1-203ENST00000428982 BLOC1S3Q6QNY0 202 aa13.84□□□□□ -0.19
SYNGAP1-203ENST00000428982 NLRP8Q86W28 1048 aa13.84□□□□□ -0.19
SYNGAP1-203ENST00000428982 MS4A15Q8N5U1 240 aa13.84□□□□□ -0.19
SYNGAP1-203ENST00000428982 ATP6V1C2Q8NEY4 427 aa13.84□□□□□ -0.19
SYNGAP1-203ENST00000428982 OR10A6Q8NH74 314 aa13.84□□□□□ -0.19
SYNGAP1-203ENST00000428982 SCAMP5Q8TAC9 235 aa13.84□□□□□ -0.19
SYNGAP1-203ENST00000428982 NXPE3Q969Y0 559 aa13.84□□□□□ -0.19
SYNGAP1-203ENST00000428982 RNFT2Q96EX2 444 aa13.84□□□□□ -0.19
SYNGAP1-203ENST00000428982 IL23AQ9NPF7 189 aa13.84□□□□□ -0.19
SYNGAP1-203ENST00000428982 THUMPD1Q9NXG2 353 aaKnown RBP13.84□□□□□ -0.19
SYNGAP1-203ENST00000428982 POM121BA6NF01 834 aa13.83□□□□□ -0.19
SYNGAP1-203ENST00000428982 SCAMP3O14828 347 aaKnown RBP13.83□□□□□ -0.19
SYNGAP1-203ENST00000428982 TSPAN12O95859 305 aa13.83□□□□□ -0.19
SYNGAP1-203ENST00000428982 GPX3P22352 226 aa13.83□□□□□ -0.19
SYNGAP1-203ENST00000428982 KLHL22Q53GT1 634 aa13.83□□□□□ -0.19
SYNGAP1-203ENST00000428982 XKR4Q5GH76 650 aa13.83□□□□□ -0.19
SYNGAP1-203ENST00000428982 ZCCHC12Q6PEW1 402 aa13.83□□□□□ -0.19
SYNGAP1-203ENST00000428982 RPS27LQ71UM5 84 aaKnown RBP13.83□□□□□ -0.19
SYNGAP1-203ENST00000428982 KANSL1Q7Z3B3 1105 aa13.83□□□□□ -0.19
SYNGAP1-203ENST00000428982 TSPYL5Q86VY4 417 aaPredicted RBP13.83□□□□□ -0.19
SYNGAP1-203ENST00000428982 TCEAL4Q96EI5 215 aa13.83□□□□□ -0.19
SYNGAP1-203ENST00000428982 C1GALT1C1Q96EU7 318 aa13.83□□□□□ -0.19
SYNGAP1-203ENST00000428982 ART5Q96L15 291 aa13.83□□□□□ -0.19
SYNGAP1-203ENST00000428982 GIMAP2Q9UG22 337 aa13.83□□□□□ -0.19
SYNGAP1-203ENST00000428982 LCHNA4D1U4 455 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 ARGFXA6NJG6 315 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 MID1O15344 667 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 KHDRBS3O75525 346 aaKnown RBP13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 PDHA2P29803 388 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 ST3GAL4Q11206 333 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 TBCEQ15813 527 aaPredicted RBP13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 PROX2Q3B8N5 592 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 KDELC1Q6UW63 502 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 IGSF21Q96ID5 467 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 MBOAT4Q96T53 435 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 CLN6Q9NWW5 311 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 FBXL2Q9UKC9 423 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 ATXN7L1Q9ULK2 861 aaPredicted RBP13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 ARID2Q68CP9 1835 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 CXCR6O00574 342 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 EEDO75530 441 aaKnown RBP13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 AFF1P51825 1210 aaKnown RBP13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 MAD2L1BPQ15013 274 aaPredicted RBP13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 CHRNA6Q15825 494 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 GPRC6AQ5T6X5 926 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 SAXO2Q658L1 398 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 ZER1Q7Z7L7 766 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 ZNF614Q8N883 585 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 ADAMTS14Q8WXS8 1223 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 PYCR2Q96C36 320 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 ELP4Q96EB1 424 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 MYO19Q96H55 970 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 KLHL5Q96PQ7 755 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 CYP2S1Q96SQ9 504 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 NLNQ9BYT8 704 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 DPAGT1Q9H3H5 408 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 SDR39U1Q9NRG7 319 aaPredicted RBP13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 TEX13CA0A0J9YWL9 993 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 SMIM30A4D0T7 59 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 TUBAL3A6NHL2 446 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 M0QZQ0 153 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 HIST1H2AGP0C0S8 130 aaPredicted RBP13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 HIST1H2ADP20671 130 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 ETFDHQ16134 617 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 RAB41Q5JT25 222 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 PRAMEF13Q5VWM6 474 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 NLRC3Q7RTR2 1065 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 ZNF367Q7RTV3 350 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 UMODL1-AS1Q8N2C9 162 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 UXS1Q8NBZ7 420 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 SFT2D1Q8WV19 159 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 SKA2Q8WVK7 121 aaPredicted RBP13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 HIST1H2AHQ96KK5 128 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 HIST1H2AJQ99878 128 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 H2AFJQ9BTM1 129 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 FAM126AQ9BYI3 521 aaPredicted RBP13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 SLC22A11Q9NSA0 550 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 PLEKHA6Q9Y2H5 1048 aa13.83□□□□□ -0.2
SYNGAP1-203ENST00000428982 DSCR3O14972 297 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms