RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 DNAJC11Q9NVH1 559 aa15.3■□□□□ 0.04
VARS-216ENST00000428445 NSMCE4AQ9NXX6 385 aa15.3■□□□□ 0.04
VARS-216ENST00000428445 MOCS1Q9NZB8 636 aa15.3■□□□□ 0.04
VARS-216ENST00000428445 WWOXQ9NZC7 414 aa15.3■□□□□ 0.04
VARS-216ENST00000428445 KCNN3Q9UGI6 736 aa15.3■□□□□ 0.04
VARS-216ENST00000428445 ACAD8Q9UKU7 415 aa15.3■□□□□ 0.04
VARS-216ENST00000428445 MRPS33Q9Y291 106 aaKnown RBP15.3■□□□□ 0.04
VARS-216ENST00000428445 ARHGAP21Q5T5U3 1957 aa15.29■□□□□ 0.04
VARS-216ENST00000428445 A0A088AWK7 358 aa15.29■□□□□ 0.04
VARS-216ENST00000428445 CXorf49A8MYA2 514 aaPredicted RBP15.29■□□□□ 0.04
VARS-216ENST00000428445 SAP18O00422 153 aaKnown RBP15.29■□□□□ 0.04
VARS-216ENST00000428445 TP73O15350 636 aa15.29■□□□□ 0.04
VARS-216ENST00000428445 PHGDHO43175 533 aaKnown RBP15.29■□□□□ 0.04
VARS-216ENST00000428445 ZWINTO95229 277 aa15.29■□□□□ 0.04
VARS-216ENST00000428445 LRATO95237 230 aa15.29■□□□□ 0.04
VARS-216ENST00000428445 IGHG3P01860 377 aa15.29■□□□□ 0.04
VARS-216ENST00000428445 RFPL3SP0C7P2 107 aa15.29■□□□□ 0.04
VARS-216ENST00000428445 CD1EP15812 388 aa15.29■□□□□ 0.04
VARS-216ENST00000428445 EPORP19235 508 aa15.29■□□□□ 0.04
VARS-216ENST00000428445 ENDOUP21128 410 aaKnown RBP15.29■□□□□ 0.04
VARS-216ENST00000428445 ZNF10P21506 573 aaPredicted RBP15.29■□□□□ 0.04
VARS-216ENST00000428445 ZFP36L2P47974 494 aaKnown RBP15.29■□□□□ 0.04
VARS-216ENST00000428445 MRPS25P82663 173 aaKnown RBP15.29■□□□□ 0.04
VARS-216ENST00000428445 PDIA2Q13087 525 aaKnown RBP15.29■□□□□ 0.04
VARS-216ENST00000428445 B3GNT6Q6ZMB0 384 aa15.29■□□□□ 0.04
VARS-216ENST00000428445 ADAMTSL2Q86TH1 951 aa15.29■□□□□ 0.04
VARS-216ENST00000428445 ZZZ3Q8IYH5 903 aa15.29■□□□□ 0.04
VARS-216ENST00000428445 FAM109AQ8N4B1 249 aa15.29■□□□□ 0.04
VARS-216ENST00000428445 DAZLQ92904 295 aaKnown RBP15.29■□□□□ 0.04
VARS-216ENST00000428445 LDAHQ9H6V9 325 aa15.29■□□□□ 0.04
VARS-216ENST00000428445 EXO5Q9H790 373 aa15.29■□□□□ 0.04
VARS-216ENST00000428445 POPDC3Q9HBV1 291 aa15.29■□□□□ 0.04
VARS-216ENST00000428445 SPRR3Q9UBC9 169 aa15.29■□□□□ 0.04
VARS-216ENST00000428445 L3MBTL1Q9Y468 752 aa15.29■□□□□ 0.04
VARS-216ENST00000428445 ATG4BQ9Y4P1 393 aa15.29■□□□□ 0.04
VARS-216ENST00000428445 A0A1B0GVC2 190 aa15.28■□□□□ 0.04
VARS-216ENST00000428445 WASHC1A8K0Z3 465 aa15.28■□□□□ 0.04
VARS-216ENST00000428445 KDM4EB2RXH2 506 aaPredicted RBP15.28■□□□□ 0.04
VARS-216ENST00000428445 PRKRAO75569 313 aaKnown RBP15.28■□□□□ 0.04
VARS-216ENST00000428445 WISP3O95389 354 aaPredicted RBP15.28■□□□□ 0.04
VARS-216ENST00000428445 TGFB1P01137 390 aa15.28■□□□□ 0.04
VARS-216ENST00000428445 P04436 131 aa15.28■□□□□ 0.04
VARS-216ENST00000428445 ATP5A1P25705 553 aaKnown RBP15.28■□□□□ 0.04
VARS-216ENST00000428445 KCNC1P48547 511 aa15.28■□□□□ 0.04
VARS-216ENST00000428445 MAN2A2P49641 1150 aa15.28■□□□□ 0.04
VARS-216ENST00000428445 ARL4CP56559 192 aa15.28■□□□□ 0.04
VARS-216ENST00000428445 WNT3P56703 355 aa15.28■□□□□ 0.04
VARS-216ENST00000428445 SLC10A1Q14973 349 aa15.28■□□□□ 0.04
VARS-216ENST00000428445 CDKL4Q5MAI5 379 aa15.28■□□□□ 0.04
VARS-216ENST00000428445 NDUFAF5Q5TEU4 345 aa15.28■□□□□ 0.04
VARS-216ENST00000428445 PRAMEF20Q5VT98 475 aa15.28■□□□□ 0.04
VARS-216ENST00000428445 ADGRD1Q6QNK2 874 aa15.28■□□□□ 0.04
VARS-216ENST00000428445 RGS9BPQ6ZS82 235 aa15.28■□□□□ 0.04
VARS-216ENST00000428445 GK5Q6ZS86 529 aa15.28■□□□□ 0.04
VARS-216ENST00000428445 WDR53Q7Z5U6 358 aaPredicted RBP15.28■□□□□ 0.04
VARS-216ENST00000428445 OR14A16Q8NHC5 309 aa15.28■□□□□ 0.04
VARS-216ENST00000428445 EXT2Q93063 718 aa15.28■□□□□ 0.04
VARS-216ENST00000428445 POM121Q96HA1 1249 aa15.28■□□□□ 0.04
VARS-216ENST00000428445 MCMBPQ9BTE3 642 aa15.28■□□□□ 0.04
VARS-216ENST00000428445 PRM3Q9NNZ6 103 aa15.28■□□□□ 0.04
VARS-216ENST00000428445 SACM1LQ9NTJ5 587 aa15.28■□□□□ 0.04
VARS-216ENST00000428445 DNAJB12Q9NXW2 375 aaKnown RBP15.28■□□□□ 0.04
VARS-216ENST00000428445 GPRC5BQ9NZH0 403 aa15.28■□□□□ 0.04
VARS-216ENST00000428445 VPS13CQ709C8 3753 aa15.27■□□□□ 0.04
VARS-216ENST00000428445 OR14I1A6ND48 311 aa15.27■□□□□ 0.04
VARS-216ENST00000428445 FIGNL2A6NMB9 653 aa15.27■□□□□ 0.04
VARS-216ENST00000428445 AQP7O14520 342 aa15.27■□□□□ 0.04
VARS-216ENST00000428445 BCKDKO14874 412 aa15.27■□□□□ 0.04
VARS-216ENST00000428445 FGF17O60258 216 aa15.27■□□□□ 0.04
VARS-216ENST00000428445 CCNT2O60583 730 aaKnown RBP15.27■□□□□ 0.04
VARS-216ENST00000428445 CCDC166P0CW27 439 aa15.27■□□□□ 0.04
VARS-216ENST00000428445 CD99P14209 185 aa15.27■□□□□ 0.04
VARS-216ENST00000428445 MSH2P43246 934 aa15.27■□□□□ 0.04
VARS-216ENST00000428445 CHIT1Q13231 466 aa15.27■□□□□ 0.04
VARS-216ENST00000428445 RCN2Q14257 317 aa15.27■□□□□ 0.04
VARS-216ENST00000428445 EFTUD2Q15029 972 aaKnown RBP eCLIP15.27■□□□□ 0.043e-7■■■■■ 43.2
VARS-216ENST00000428445 PIGGQ5H8A4 983 aa15.27■□□□□ 0.04
VARS-216ENST00000428445 ARSKQ6UWY0 536 aa15.27■□□□□ 0.04
VARS-216ENST00000428445 GPSM1Q86YR5 675 aa15.27■□□□□ 0.04
VARS-216ENST00000428445 C9orf40Q8IXQ3 194 aa15.27■□□□□ 0.04
VARS-216ENST00000428445 CLYBLQ8N0X4 340 aa15.27■□□□□ 0.04
VARS-216ENST00000428445 ACOT4Q8N9L9 421 aa15.27■□□□□ 0.04
VARS-216ENST00000428445 PTCD3Q96EY7 689 aaKnown RBP15.27■□□□□ 0.04
VARS-216ENST00000428445 GPATCH1Q9BRR8 931 aaKnown RBP15.27■□□□□ 0.04
VARS-216ENST00000428445 TMUB1Q9BVT8 246 aa15.27■□□□□ 0.04
VARS-216ENST00000428445 DERL2Q9GZP9 239 aa15.27■□□□□ 0.04
VARS-216ENST00000428445 RHOJQ9H4E5 214 aa15.27■□□□□ 0.04
VARS-216ENST00000428445 PROK2Q9HC23 129 aa15.27■□□□□ 0.04
VARS-216ENST00000428445 ZNF358Q9NW07 568 aa15.27■□□□□ 0.04
VARS-216ENST00000428445 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.27■□□□□ 0.04
VARS-216ENST00000428445 MPDZO75970 2070 aa15.27■□□□□ 0.03
VARS-216ENST00000428445 TRGV5A0A0B4J1U4 118 aa15.26■□□□□ 0.03
VARS-216ENST00000428445 CTAG2O75638 210 aa15.26■□□□□ 0.03
VARS-216ENST00000428445 STK16O75716 305 aa15.26■□□□□ 0.03
VARS-216ENST00000428445 PCNAP12004 261 aa15.26■□□□□ 0.03
VARS-216ENST00000428445 CD1DP15813 335 aa15.26■□□□□ 0.03
VARS-216ENST00000428445 CPN2P22792 545 aa15.26■□□□□ 0.03
VARS-216ENST00000428445 GGT5P36269 586 aa15.26■□□□□ 0.03
VARS-216ENST00000428445 TRPC1P48995 793 aa15.26■□□□□ 0.03
VARS-216ENST00000428445 DR1Q01658 176 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms