RNA–Protein interactions for RNA: ENST00000428064.5

LIMS1-208, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 2

Gene LIMS1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-208ENST00000428064 IGSF5Q9NSI5 407 aa19.47■□□□□ 0.71
LIMS1-208ENST00000428064 RYDENQ9NUL5 291 aaKnown RBP19.47■□□□□ 0.71
LIMS1-208ENST00000428064 SYCE1LA8MT33 242 aa19.46■□□□□ 0.71
LIMS1-208ENST00000428064 C17orf105B2RV13 164 aa19.46■□□□□ 0.71
LIMS1-208ENST00000428064 SUPT3HB4E1H0 165 aa19.46■□□□□ 0.71
LIMS1-208ENST00000428064 ACOT7O00154 380 aa19.46■□□□□ 0.71
LIMS1-208ENST00000428064 LDB3O75112 727 aa19.46■□□□□ 0.71
LIMS1-208ENST00000428064 SUPT3HO75486 399 aa19.46■□□□□ 0.71
LIMS1-208ENST00000428064 FAM155BO75949 473 aa19.46■□□□□ 0.71
LIMS1-208ENST00000428064 TPOP07202 933 aa19.46■□□□□ 0.71
LIMS1-208ENST00000428064 SNRPB2P08579 225 aaKnown RBP19.46■□□□□ 0.71
LIMS1-208ENST00000428064 SOX3P41225 446 aa19.46■□□□□ 0.71
LIMS1-208ENST00000428064 MAGEA4P43358 317 aa19.46■□□□□ 0.71
LIMS1-208ENST00000428064 KIR3DL1P43629 444 aa19.46■□□□□ 0.71
LIMS1-208ENST00000428064 RNF4P78317 190 aa19.46■□□□□ 0.71
LIMS1-208ENST00000428064 AP5B1Q2VPB7 878 aa19.46■□□□□ 0.71
LIMS1-208ENST00000428064 NDUFAF5Q5TEU4 345 aa19.46■□□□□ 0.71
LIMS1-208ENST00000428064 KHDRBS2Q5VWX1 349 aaKnown RBP19.46■□□□□ 0.71
LIMS1-208ENST00000428064 TMEM211Q6ICI0 200 aa19.46■□□□□ 0.71
LIMS1-208ENST00000428064 PAOXQ6QHF9 649 aa19.46■□□□□ 0.71
LIMS1-208ENST00000428064 ZDHHC24Q6UX98 284 aa19.46■□□□□ 0.71
LIMS1-208ENST00000428064 IL20RBQ6UXL0 311 aa19.46■□□□□ 0.71
LIMS1-208ENST00000428064 C3P1Q6ZMU1 363 aa19.46■□□□□ 0.71
LIMS1-208ENST00000428064 OR2M7Q8NG81 312 aa19.46■□□□□ 0.71
LIMS1-208ENST00000428064 OR52N2Q8NGI0 321 aa19.46■□□□□ 0.71
LIMS1-208ENST00000428064 FBF1Q8TES7 1133 aa19.46■□□□□ 0.71
LIMS1-208ENST00000428064 CA5BP1Q8WTZ4 195 aa19.46■□□□□ 0.71
LIMS1-208ENST00000428064 ANKRD9Q96BM1 317 aaPredicted RBP19.46■□□□□ 0.71
LIMS1-208ENST00000428064 C14orf79Q96F83 325 aa19.46■□□□□ 0.71
LIMS1-208ENST00000428064 SGCZQ96LD1 299 aa19.46■□□□□ 0.71
LIMS1-208ENST00000428064 OR8D2Q9GZM6 311 aa19.46■□□□□ 0.71
LIMS1-208ENST00000428064 MS4A12Q9NXJ0 267 aa19.46■□□□□ 0.71
LIMS1-208ENST00000428064 COPS7AQ9UBW8 275 aa19.46■□□□□ 0.71
LIMS1-208ENST00000428064 AKAP9Q99996 3911 aa19.46■□□□□ 0.71
LIMS1-208ENST00000428064 UBXN8O00124 270 aa19.45■□□□□ 0.7
LIMS1-208ENST00000428064 WWP2O00308 870 aa19.45■□□□□ 0.7
LIMS1-208ENST00000428064 RTCAO00442 366 aaKnown RBP19.45■□□□□ 0.7
LIMS1-208ENST00000428064 CDC40O60508 579 aaKnown RBP eCLIP19.45■□□□□ 0.7
LIMS1-208ENST00000428064 TGFB1P01137 390 aa19.45■□□□□ 0.7
LIMS1-208ENST00000428064 MTHFD2P13995 350 aa19.45■□□□□ 0.7
LIMS1-208ENST00000428064 EPB42P16452 691 aa19.45■□□□□ 0.7
LIMS1-208ENST00000428064 GMPRP36959 345 aa19.45■□□□□ 0.7
LIMS1-208ENST00000428064 PIK3CBP42338 1070 aa19.45■□□□□ 0.7
LIMS1-208ENST00000428064 SSR2P43308 183 aa19.45■□□□□ 0.7
LIMS1-208ENST00000428064 GUCY2DQ02846 1103 aa19.45■□□□□ 0.7
LIMS1-208ENST00000428064 MPEG1Q2M385 716 aa19.45■□□□□ 0.7
LIMS1-208ENST00000428064 DEPDC1Q5TB30 811 aa19.45■□□□□ 0.7
LIMS1-208ENST00000428064 RTL4Q6ZR62 310 aa19.45■□□□□ 0.7
LIMS1-208ENST00000428064 GK5Q6ZS86 529 aa19.45■□□□□ 0.7
LIMS1-208ENST00000428064 ZNF572Q7Z3I7 529 aaPredicted RBP19.45■□□□□ 0.7
LIMS1-208ENST00000428064 ZNF321PQ8N8H1 164 aa19.45■□□□□ 0.7
LIMS1-208ENST00000428064 NUBPLQ8TB37 319 aa19.45■□□□□ 0.7
LIMS1-208ENST00000428064 ZNF721Q8TF20 911 aa19.45■□□□□ 0.7
LIMS1-208ENST00000428064 SDCCAG3Q96C92 435 aa19.45■□□□□ 0.7
LIMS1-208ENST00000428064 LIN28AQ9H9Z2 209 aaKnown RBP19.45■□□□□ 0.7
LIMS1-208ENST00000428064 ACOT9Q9Y305 439 aa19.45■□□□□ 0.7
LIMS1-208ENST00000428064 TACC2O95359 2948 aa19.45■□□□□ 0.7
LIMS1-208ENST00000428064 PKDREJQ9NTG1 2253 aa19.44■□□□□ 0.7
LIMS1-208ENST00000428064 A0A087X1B8 175 aa19.44■□□□□ 0.7
LIMS1-208ENST00000428064 PINLYPA6NC86 204 aa19.44■□□□□ 0.7
LIMS1-208ENST00000428064 GLSO94925 669 aaPredicted RBP19.44■□□□□ 0.7
LIMS1-208ENST00000428064 PCNAP12004 261 aa19.44■□□□□ 0.7
LIMS1-208ENST00000428064 COX7A2P14406 83 aa19.44■□□□□ 0.7
LIMS1-208ENST00000428064 TNNI3P19429 210 aa19.44■□□□□ 0.7
LIMS1-208ENST00000428064 CPN2P22792 545 aa19.44■□□□□ 0.7
LIMS1-208ENST00000428064 STT3AP46977 705 aa19.44■□□□□ 0.7
LIMS1-208ENST00000428064 HYAL4Q2M3T9 481 aa19.44■□□□□ 0.7
LIMS1-208ENST00000428064 LIPJQ5W064 366 aa19.44■□□□□ 0.7
LIMS1-208ENST00000428064 OR4C11Q6IEV9 310 aa19.44■□□□□ 0.7
LIMS1-208ENST00000428064 OPN5Q6U736 354 aa19.44■□□□□ 0.7
LIMS1-208ENST00000428064 SLC22A16Q86VW1 577 aa19.44■□□□□ 0.7
LIMS1-208ENST00000428064 CENPLQ8N0S6 344 aaPredicted RBP19.44■□□□□ 0.7
LIMS1-208ENST00000428064 ZCCHC7Q8N3Z6 543 aaKnown RBP19.44■□□□□ 0.7
LIMS1-208ENST00000428064 MARVELD2Q8N4S9 558 aa19.44■□□□□ 0.7
LIMS1-208ENST00000428064 ASB5Q8WWX0 329 aa19.44■□□□□ 0.7
LIMS1-208ENST00000428064 SCYL1Q96KG9 808 aa19.44■□□□□ 0.7
LIMS1-208ENST00000428064 FAM173AQ9BQD7 235 aa19.44■□□□□ 0.7
LIMS1-208ENST00000428064 CENPKQ9BS16 269 aa19.44■□□□□ 0.7
LIMS1-208ENST00000428064 TTTY12Q9BZ98 90 aa19.44■□□□□ 0.7
LIMS1-208ENST00000428064 PHF11Q9UIL8 331 aa19.44■□□□□ 0.7
LIMS1-208ENST00000428064 HRH3Q9Y5N1 445 aa19.44■□□□□ 0.7
LIMS1-208ENST00000428064 OR14I1A6ND48 311 aa19.43■□□□□ 0.7
LIMS1-208ENST00000428064 UGDHO60701 494 aa19.43■□□□□ 0.7
LIMS1-208ENST00000428064 ETHE1O95571 254 aa19.43■□□□□ 0.7
LIMS1-208ENST00000428064 IGHG3P01860 377 aa19.43■□□□□ 0.7
LIMS1-208ENST00000428064 IGKV3-11P04433 115 aa19.43■□□□□ 0.7
LIMS1-208ENST00000428064 CNR1P21554 472 aa19.43■□□□□ 0.7
LIMS1-208ENST00000428064 PPIAP62937 165 aaKnown RBP19.43■□□□□ 0.7
LIMS1-208ENST00000428064 TNFRSF17Q02223 184 aa19.43■□□□□ 0.7
LIMS1-208ENST00000428064 SETDB1Q15047 1291 aa19.43■□□□□ 0.7
LIMS1-208ENST00000428064 FAM83EQ2M2I3 478 aa19.43■□□□□ 0.7
LIMS1-208ENST00000428064 CCDC25Q86WR0 208 aa19.43■□□□□ 0.7
LIMS1-208ENST00000428064 HUS1BQ8NHY5 278 aa19.43■□□□□ 0.7
LIMS1-208ENST00000428064 TANKQ92844 425 aa19.43■□□□□ 0.7
LIMS1-208ENST00000428064 RGMAQ96B86 450 aa19.43■□□□□ 0.7
LIMS1-208ENST00000428064 NXNL1Q96CM4 212 aa19.43■□□□□ 0.7
LIMS1-208ENST00000428064 RPF2Q9H7B2 306 aaKnown RBP19.43■□□□□ 0.7
LIMS1-208ENST00000428064 DMRT3Q9NQL9 472 aa19.43■□□□□ 0.7
LIMS1-208ENST00000428064 PCDHGA11Q9Y5H2 935 aa19.43■□□□□ 0.7
LIMS1-208ENST00000428064 MYOCOSA0A1B0GUC4 107 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms