RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 SERTAD3Q9UJW9 196 aa14.29□□□□□ -0.12
GINS3-203ENST00000426538 ERVK-11Q9UQG0 969 aa14.29□□□□□ -0.12
GINS3-203ENST00000426538 ENTPD4Q9Y227 616 aa14.29□□□□□ -0.12
GINS3-203ENST00000426538 NEUROG3Q9Y4Z2 214 aa14.29□□□□□ -0.12
GINS3-203ENST00000426538 ZNF780BQ9Y6R6 833 aa14.29□□□□□ -0.12
GINS3-203ENST00000426538 SGK494L7N484 410 aa14.28□□□□□ -0.12
GINS3-203ENST00000426538 GMNNO75496 209 aa14.28□□□□□ -0.12
GINS3-203ENST00000426538 HOXB9P17482 250 aaPredicted RBP14.28□□□□□ -0.12
GINS3-203ENST00000426538 CKMT2P17540 419 aa14.28□□□□□ -0.12
GINS3-203ENST00000426538 ERFP50548 548 aa14.28□□□□□ -0.12
GINS3-203ENST00000426538 OLR1P78380 273 aa14.28□□□□□ -0.12
GINS3-203ENST00000426538 COL9A2Q14055 689 aaPredicted RBP14.28□□□□□ -0.12
GINS3-203ENST00000426538 GPR19Q15760 415 aa14.28□□□□□ -0.12
GINS3-203ENST00000426538 CLPPQ16740 277 aaPredicted RBP14.28□□□□□ -0.12
GINS3-203ENST00000426538 ZNF574Q6ZN55 896 aaPredicted RBP14.28□□□□□ -0.12
GINS3-203ENST00000426538 DHFR2Q86XF0 187 aa14.28□□□□□ -0.12
GINS3-203ENST00000426538 PDSS2Q86YH6 399 aa14.28□□□□□ -0.12
GINS3-203ENST00000426538 OR9A4Q8NGU2 314 aa14.28□□□□□ -0.12
GINS3-203ENST00000426538 ZFP28Q8NHY6 868 aa14.28□□□□□ -0.12
GINS3-203ENST00000426538 SLC26A7Q8TE54 656 aa14.28□□□□□ -0.12
GINS3-203ENST00000426538 FAM120BQ96EK7 910 aaKnown RBP14.28□□□□□ -0.12
GINS3-203ENST00000426538 LRGUKQ96M69 825 aa14.28□□□□□ -0.12
GINS3-203ENST00000426538 GFM1Q96RP9 751 aaKnown RBP14.28□□□□□ -0.12
GINS3-203ENST00000426538 CPPED1Q9BRF8 314 aaPredicted RBP14.28□□□□□ -0.12
GINS3-203ENST00000426538 KAT8Q9H7Z6 458 aaKnown RBP14.28□□□□□ -0.12
GINS3-203ENST00000426538 TPT1P8Q9HAU6 139 aa14.28□□□□□ -0.12
GINS3-203ENST00000426538 NEUROD4Q9HD90 331 aa14.28□□□□□ -0.12
GINS3-203ENST00000426538 ACSS1Q9NUB1 689 aaPredicted RBP14.28□□□□□ -0.12
GINS3-203ENST00000426538 EGFL7Q9UHF1 273 aa14.28□□□□□ -0.12
GINS3-203ENST00000426538 CORO2BQ9UQ03 480 aa14.28□□□□□ -0.12
GINS3-203ENST00000426538 SNX8Q9Y5X2 465 aa14.28□□□□□ -0.12
GINS3-203ENST00000426538 FRYLO94915 3013 aa14.28□□□□□ -0.12
GINS3-203ENST00000426538 NUP214P35658 2090 aaPredicted RBP14.27□□□□□ -0.12
GINS3-203ENST00000426538 RALGAPA1Q6GYQ0 2036 aa14.27□□□□□ -0.12
GINS3-203ENST00000426538 A0A0A6YYC8 382 aaPredicted RBP14.27□□□□□ -0.12
GINS3-203ENST00000426538 FITM1A5D6W6 292 aa14.27□□□□□ -0.12
GINS3-203ENST00000426538 WASHC1A8K0Z3 465 aa14.27□□□□□ -0.12
GINS3-203ENST00000426538 I3L1I5 382 aaPredicted RBP14.27□□□□□ -0.12
GINS3-203ENST00000426538 ACOT8O14734 319 aa14.27□□□□□ -0.12
GINS3-203ENST00000426538 MSL3P1P0C860 447 aa14.27□□□□□ -0.12
GINS3-203ENST00000426538 FOLR1P15328 257 aa14.27□□□□□ -0.12
GINS3-203ENST00000426538 HTR1EP28566 365 aa14.27□□□□□ -0.12
GINS3-203ENST00000426538 MPIP34949 423 aa14.27□□□□□ -0.12
GINS3-203ENST00000426538 FRKP42685 505 aaPredicted RBP14.27□□□□□ -0.12
GINS3-203ENST00000426538 AVPR1BP47901 424 aa14.27□□□□□ -0.12
GINS3-203ENST00000426538 EMP3P54852 163 aa14.27□□□□□ -0.12
GINS3-203ENST00000426538 SLC14A1Q13336 389 aa14.27□□□□□ -0.12
GINS3-203ENST00000426538 MLC1Q15049 377 aa14.27□□□□□ -0.12
GINS3-203ENST00000426538 SF3A2Q15428 464 aaKnown RBP14.27□□□□□ -0.12
GINS3-203ENST00000426538 AASDHQ4L235 1098 aaPredicted RBP14.27□□□□□ -0.12
GINS3-203ENST00000426538 ANGPTL8Q6UXH0 198 aa14.27□□□□□ -0.12
GINS3-203ENST00000426538 TMPRSS9Q7Z410 1059 aa14.27□□□□□ -0.12
GINS3-203ENST00000426538 SAMD14Q8IZD0 417 aaPredicted RBP14.27□□□□□ -0.12
GINS3-203ENST00000426538 ARHGEF39Q8N4T4 335 aa14.27□□□□□ -0.12
GINS3-203ENST00000426538 BHLHE22Q8NFJ8 381 aaPredicted RBP14.27□□□□□ -0.12
GINS3-203ENST00000426538 OR2T12Q8NG77 320 aa14.27□□□□□ -0.12
GINS3-203ENST00000426538 ZNF583Q96ND8 569 aa14.27□□□□□ -0.12
GINS3-203ENST00000426538 PRRX2Q99811 253 aa14.27□□□□□ -0.12
GINS3-203ENST00000426538 MUC13Q9H3R2 512 aa14.27□□□□□ -0.12
GINS3-203ENST00000426538 IKZF5Q9H5V7 419 aa14.27□□□□□ -0.12
GINS3-203ENST00000426538 DCLRE1BQ9H816 532 aa14.27□□□□□ -0.12
GINS3-203ENST00000426538 PRDM9Q9NQV7 894 aa14.27□□□□□ -0.12
GINS3-203ENST00000426538 PDP2Q9P2J9 529 aa14.27□□□□□ -0.12
GINS3-203ENST00000426538 GMPR2Q9P2T1 348 aaKnown RBP14.27□□□□□ -0.12
GINS3-203ENST00000426538 CES1P1Q9UKY3 287 aa14.27□□□□□ -0.12
GINS3-203ENST00000426538 DNAJB6O75190 326 aa14.27□□□□□ -0.13
GINS3-203ENST00000426538 FKBP6O75344 327 aa14.27□□□□□ -0.13
GINS3-203ENST00000426538 RDH16O75452 317 aa14.27□□□□□ -0.13
GINS3-203ENST00000426538 PSMG1O95456 288 aa14.27□□□□□ -0.13
GINS3-203ENST00000426538 NSA2O95478 260 aaKnown RBP14.27□□□□□ -0.13
GINS3-203ENST00000426538 NTRK1P04629 796 aa14.27□□□□□ -0.13
GINS3-203ENST00000426538 ANKRD34CP0C6C1 535 aa14.27□□□□□ -0.13
GINS3-203ENST00000426538 CSNK2A2P19784 350 aaPredicted RBP14.27□□□□□ -0.13
GINS3-203ENST00000426538 SOAT1P35610 550 aa14.27□□□□□ -0.13
GINS3-203ENST00000426538 SOX11P35716 441 aa14.27□□□□□ -0.13
GINS3-203ENST00000426538 CHI3L1P36222 383 aaPredicted RBP14.27□□□□□ -0.13
GINS3-203ENST00000426538 NCBP2P52298 156 aaKnown RBP eCLIP14.27□□□□□ -0.13
GINS3-203ENST00000426538 ITGA1P56199 1179 aa14.27□□□□□ -0.13
GINS3-203ENST00000426538 HSPB3Q12988 150 aa14.27□□□□□ -0.13
GINS3-203ENST00000426538 OR52E8Q6IFG1 317 aa14.27□□□□□ -0.13
GINS3-203ENST00000426538 TLDC1Q6P9B6 456 aa14.27□□□□□ -0.13
GINS3-203ENST00000426538 ZNF551Q7Z340 670 aaPredicted RBP14.27□□□□□ -0.13
GINS3-203ENST00000426538 ARHGAP22Q7Z5H3 698 aa14.27□□□□□ -0.13
GINS3-203ENST00000426538 CA13Q8N1Q1 262 aa14.27□□□□□ -0.13
GINS3-203ENST00000426538 SUMF1Q8NBK3 374 aa14.27□□□□□ -0.13
GINS3-203ENST00000426538 OR4K14Q8NGD5 310 aa14.27□□□□□ -0.13
GINS3-203ENST00000426538 OR5T3Q8NGG3 340 aa14.27□□□□□ -0.13
GINS3-203ENST00000426538 ZFP90Q8TF47 636 aa14.27□□□□□ -0.13
GINS3-203ENST00000426538 C10orf90Q96M02 699 aa14.27□□□□□ -0.13
GINS3-203ENST00000426538 SLC35A5Q9BS91 424 aa14.27□□□□□ -0.13
GINS3-203ENST00000426538 COL25A1Q9BXS0 654 aaPredicted RBP14.27□□□□□ -0.13
GINS3-203ENST00000426538 TRIM15Q9C019 465 aa14.27□□□□□ -0.13
GINS3-203ENST00000426538 RASSF4Q9H2L5 321 aa14.27□□□□□ -0.13
GINS3-203ENST00000426538 FGF21Q9NSA1 209 aa14.27□□□□□ -0.13
GINS3-203ENST00000426538 ACTR3BQ9P1U1 418 aa14.27□□□□□ -0.13
GINS3-203ENST00000426538 FTSJ1Q9UET6 329 aa14.27□□□□□ -0.13
GINS3-203ENST00000426538 IGHV5-10-1A0A0J9YXX1 117 aa14.26□□□□□ -0.13
GINS3-203ENST00000426538 GSTA4O15217 222 aa14.26□□□□□ -0.13
GINS3-203ENST00000426538 KRT75O95678 551 aa14.26□□□□□ -0.13
GINS3-203ENST00000426538 C8orf89P0DMQ9 161 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms