RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 SELENOSQ9BQE4 189 aa5.86□□□□□ -1.47
NIF3L1-207ENST00000426253 DPH7Q9BTV6 452 aa5.86□□□□□ -1.47
NIF3L1-207ENST00000426253 ACAT2Q9BWD1 397 aa5.86□□□□□ -1.47
NIF3L1-207ENST00000426253 TRIM31Q9BZY9 425 aa5.86□□□□□ -1.47
NIF3L1-207ENST00000426253 ING2Q9H160 280 aa5.86□□□□□ -1.47
NIF3L1-207ENST00000426253 MRPS30Q9NP92 439 aaKnown RBP5.86□□□□□ -1.47
NIF3L1-207ENST00000426253 ABCF3Q9NUQ8 709 aa5.86□□□□□ -1.47
NIF3L1-207ENST00000426253 PNPOQ9NVS9 261 aa5.86□□□□□ -1.47
NIF3L1-207ENST00000426253 UTP6Q9NYH9 597 aaKnown RBP5.86□□□□□ -1.47
NIF3L1-207ENST00000426253 TAS2R13Q9NYV9 303 aa5.86□□□□□ -1.47
NIF3L1-207ENST00000426253 TRMT6Q9UJA5 497 aaKnown RBP5.86□□□□□ -1.47
NIF3L1-207ENST00000426253 CHMP2BQ9UQN3 213 aa5.86□□□□□ -1.47
NIF3L1-207ENST00000426253 PADI2Q9Y2J8 665 aa5.86□□□□□ -1.47
NIF3L1-207ENST00000426253 PTRH2Q9Y3E5 179 aaKnown RBP5.86□□□□□ -1.47
NIF3L1-207ENST00000426253 TEX264Q9Y6I9 313 aa5.86□□□□□ -1.47
NIF3L1-207ENST00000426253 STAB1Q9NY15 2570 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 A0A1B0GX78 115 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 A6NL46 340 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 E7ENX8 843 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 EIF3FO00303 357 aaPredicted RBP5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 PEX12O00623 359 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 NDC80O14777 642 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 DSCR3O14972 297 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 CTSVO60911 334 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 KLF7O75840 302 aaPredicted RBP5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 DNAJB5O75953 348 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 SEC31AO94979 1220 aaKnown RBP5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 SLC16A8O95907 504 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 ONECUT2O95948 504 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 HIST1H2AGP0C0S8 130 aaPredicted RBP5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 ERGP11308 486 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 HIST1H2ADP20671 130 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 MALP21145 153 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 OTX2P32243 289 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 FOLR3P41439 243 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 RPL21P46778 160 aaKnown RBP5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 RGS4P49798 205 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 PMS2P54278 862 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 LINC00310P59036 64 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 RAB1AP62820 205 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 ABATP80404 500 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 MRPS25P82663 173 aaKnown RBP5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 TAP2Q03519 686 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 RELAQ04206 551 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 PDIA2Q13087 525 aaKnown RBP5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 CHAF1BQ13112 559 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 SP140Q13342 867 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 NAA25Q14CX7 972 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 HECTD2Q5U5R9 776 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 ICE2Q659A1 982 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 LRRC8EQ6NSJ5 796 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 FAM198BQ6UWH4 519 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 ZNF572Q7Z3I7 529 aaPredicted RBP5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 PIWIL4Q7Z3Z4 852 aaKnown RBP5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 MAATS1Q7Z4T9 603 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 RAB43Q86YS6 212 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 CNTN4Q8IWV2 1026 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 LRRC56Q8IYG6 542 aaPredicted RBP5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 GPATCH11Q8N954 259 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 ANKRD53Q8N9V6 530 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 FBXO36Q8NEA4 188 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 SPATA4Q8NEY3 305 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 LRTOMTQ8WZ04 291 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 MTFMTQ96DP5 389 aaKnown RBP5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 CCDC138Q96M89 665 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 ZNF285Q96NJ3 590 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 IP6K3Q96PC2 410 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 VRK1Q99986 396 aaPredicted RBP5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 ERP44Q9BS26 406 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 TRIM51Q9BSJ1 452 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 H2AFJQ9BTM1 129 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 SLC25A23Q9BV35 468 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 ENKD1Q9H0I2 346 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 PARVBQ9HBI1 364 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 PLAC1Q9HBJ0 212 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 MSL2Q9HCI7 577 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 ZNF304Q9HCX3 659 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 CHST11Q9NPF2 352 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 SLC22A11Q9NSA0 550 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 CUTCQ9NTM9 273 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 TAC3Q9UHF0 121 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 KLK4Q9Y5K2 254 aa5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.85□□□□□ -1.47
NIF3L1-207ENST00000426253 OR2A25A4D2G3 310 aa5.84□□□□□ -1.47
NIF3L1-207ENST00000426253 LRRC14BA6NHZ5 514 aa5.84□□□□□ -1.47
NIF3L1-207ENST00000426253 E7ESA3 106 aa5.84□□□□□ -1.47
NIF3L1-207ENST00000426253 H0YGG7 62 aa5.84□□□□□ -1.47
NIF3L1-207ENST00000426253 H3BUI4 141 aa5.84□□□□□ -1.47
NIF3L1-207ENST00000426253 TP73O15350 636 aa5.84□□□□□ -1.47
NIF3L1-207ENST00000426253 SLC16A5O15375 505 aa5.84□□□□□ -1.47
NIF3L1-207ENST00000426253 CNOT3O75175 753 aaKnown RBP5.84□□□□□ -1.47
NIF3L1-207ENST00000426253 CCNDBP1O95273 360 aa5.84□□□□□ -1.47
NIF3L1-207ENST00000426253 IGHEP01854 428 aa5.84□□□□□ -1.47
NIF3L1-207ENST00000426253 C8GP07360 202 aa5.84□□□□□ -1.47
NIF3L1-207ENST00000426253 SAT1P21673 171 aa5.84□□□□□ -1.47
NIF3L1-207ENST00000426253 HRH2P25021 359 aa5.84□□□□□ -1.47
NIF3L1-207ENST00000426253 PEX2P28328 305 aa5.84□□□□□ -1.47
NIF3L1-207ENST00000426253 HTR1EP28566 365 aa5.84□□□□□ -1.47
NIF3L1-207ENST00000426253 OR1D4P47884 311 aa5.84□□□□□ -1.47
NIF3L1-207ENST00000426253 PGGT1BP53609 377 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms