RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 TMEM164Q5U3C3 297 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 PWWP2BQ6NUJ5 590 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 CEACAM20Q6UY09 585 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 CYP2R1Q6VVX0 501 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 KRTCAP2Q8N6L1 136 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 OR8J2Q8NGG1 315 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 CCDC115Q96NT0 180 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 TSSK3Q96PN8 268 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 GBP5Q96PP8 586 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 NR1H4Q96RI1 486 aaPredicted RBP14.82□□□□□ -0.04
SHOX2-202ENST00000425436 ZFYVE21Q9BQ24 234 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 MACROD1Q9BQ69 325 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 AIF1LQ9BQI0 150 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 Q9H521 79 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 FANCEQ9HB96 536 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 C8orf4Q9NR00 106 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 GEMIN8Q9NWZ8 242 aaKnown RBP14.82□□□□□ -0.04
SHOX2-202ENST00000425436 FAM120CQ9NX05 1096 aaKnown RBP14.82□□□□□ -0.04
SHOX2-202ENST00000425436 SLAMF8Q9P0V8 285 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 ANKMY1Q9P2S6 941 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.82□□□□□ -0.04
SHOX2-202ENST00000425436 WBP11Q9Y2W2 641 aaKnown RBP14.82□□□□□ -0.04
SHOX2-202ENST00000425436 DTNAQ9Y4J8 743 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 DHRS12A0PJE2 317 aa14.81□□□□□ -0.04
SHOX2-202ENST00000425436 H0YGG7 62 aa14.81□□□□□ -0.04
SHOX2-202ENST00000425436 OR1F1O43749 312 aa14.81□□□□□ -0.04
SHOX2-202ENST00000425436 OR2B3O76000 313 aa14.81□□□□□ -0.04
SHOX2-202ENST00000425436 NTRK1P04629 796 aa14.81□□□□□ -0.04
SHOX2-202ENST00000425436 ZNF28P17035 718 aa14.81□□□□□ -0.04
SHOX2-202ENST00000425436 ITGA1P56199 1179 aa14.81□□□□□ -0.04
SHOX2-202ENST00000425436 RAB15P59190 212 aa14.81□□□□□ -0.04
SHOX2-202ENST00000425436 ARF3P61204 181 aaPredicted RBP14.81□□□□□ -0.04
SHOX2-202ENST00000425436 DDX39BQ13838 428 aaKnown RBP14.81□□□□□ -0.04
SHOX2-202ENST00000425436 GRAMD1BQ3KR37 738 aa14.81□□□□□ -0.04
SHOX2-202ENST00000425436 ANXA8L1Q5VT79 327 aa14.81□□□□□ -0.04
SHOX2-202ENST00000425436 RNF44Q7L0R7 432 aa14.81□□□□□ -0.04
SHOX2-202ENST00000425436 OR52E4Q8NGH9 312 aa14.81□□□□□ -0.04
SHOX2-202ENST00000425436 GATA6Q92908 595 aa14.81□□□□□ -0.04
SHOX2-202ENST00000425436 SLC45A3Q96JT2 553 aa14.81□□□□□ -0.04
SHOX2-202ENST00000425436 OR2A5Q96R48 311 aa14.81□□□□□ -0.04
SHOX2-202ENST00000425436 THUMPD3Q9BV44 507 aaKnown RBP14.81□□□□□ -0.04
SHOX2-202ENST00000425436 DDA1Q9BW61 102 aa14.81□□□□□ -0.04
SHOX2-202ENST00000425436 ASPSCR1Q9BZE9 553 aa14.81□□□□□ -0.04
SHOX2-202ENST00000425436 CDRT15L2A8MXV6 281 aa14.8□□□□□ -0.04
SHOX2-202ENST00000425436 ANXA4P09525 319 aaPredicted RBP14.8□□□□□ -0.04
SHOX2-202ENST00000425436 MSL3P1P0C860 447 aa14.8□□□□□ -0.04
SHOX2-202ENST00000425436 DDX5P17844 614 aaKnown RBP14.8□□□□□ -0.04
SHOX2-202ENST00000425436 PEX2P28328 305 aa14.8□□□□□ -0.04
SHOX2-202ENST00000425436 GRK3P35626 688 aa14.8□□□□□ -0.04
SHOX2-202ENST00000425436 HPCAL1P37235 193 aa14.8□□□□□ -0.04
SHOX2-202ENST00000425436 BCL6P41182 706 aa14.8□□□□□ -0.04
SHOX2-202ENST00000425436 RBBP5Q15291 538 aaKnown RBP14.8□□□□□ -0.04
SHOX2-202ENST00000425436 PGS1Q32NB8 556 aa14.8□□□□□ -0.04
SHOX2-202ENST00000425436 LPCAT4Q643R3 524 aa14.8□□□□□ -0.04
SHOX2-202ENST00000425436 TMIGD1Q6UXZ0 262 aa14.8□□□□□ -0.04
SHOX2-202ENST00000425436 R3HCC1LQ7Z5L2 792 aaKnown RBP14.8□□□□□ -0.04
SHOX2-202ENST00000425436 CAMKMTQ7Z624 323 aa14.8□□□□□ -0.04
SHOX2-202ENST00000425436 IFNEQ86WN2 208 aa14.8□□□□□ -0.04
SHOX2-202ENST00000425436 SPPL2CQ8IUH8 684 aa14.8□□□□□ -0.04
SHOX2-202ENST00000425436 ZNF655Q8N720 491 aaPredicted RBP14.8□□□□□ -0.04
SHOX2-202ENST00000425436 TMEM102Q8N9M5 508 aaPredicted RBP14.8□□□□□ -0.04
SHOX2-202ENST00000425436 PKP2Q99959 881 aa14.8□□□□□ -0.04
SHOX2-202ENST00000425436 TMEM121BQ9BXQ6 578 aaPredicted RBP14.8□□□□□ -0.04
SHOX2-202ENST00000425436 RHBGQ9H310 441 aa14.8□□□□□ -0.04
SHOX2-202ENST00000425436 GORASP2Q9H8Y8 452 aa14.8□□□□□ -0.04
SHOX2-202ENST00000425436 VAPAQ9P0L0 249 aa14.8□□□□□ -0.04
SHOX2-202ENST00000425436 EGFL7Q9UHF1 273 aa14.8□□□□□ -0.04
SHOX2-202ENST00000425436 PCDHGA3Q9Y5H0 932 aa14.8□□□□□ -0.04
SHOX2-202ENST00000425436 SDK2Q58EX2 2172 aa14.8□□□□□ -0.04
SHOX2-202ENST00000425436 CELSR3Q9NYQ7 3312 aa14.8□□□□□ -0.04
SHOX2-202ENST00000425436 TEX51A0A1B0GUA7 166 aa14.79□□□□□ -0.04
SHOX2-202ENST00000425436 EVPLLA8MZ36 301 aa14.79□□□□□ -0.04
SHOX2-202ENST00000425436 C1QTNF9BB2RNN3 333 aa14.79□□□□□ -0.04
SHOX2-202ENST00000425436 H3BMH7 237 aa14.79□□□□□ -0.04
SHOX2-202ENST00000425436 RFXANKO14593 260 aa14.79□□□□□ -0.04
SHOX2-202ENST00000425436 ZNF749O43361 778 aa14.79□□□□□ -0.04
SHOX2-202ENST00000425436 SRPX2O60687 465 aaPredicted RBP14.79□□□□□ -0.04
SHOX2-202ENST00000425436 SCRG1O75711 98 aa14.79□□□□□ -0.04
SHOX2-202ENST00000425436 DXOO77932 396 aaKnown RBP14.79□□□□□ -0.04
SHOX2-202ENST00000425436 C1QTNF9P0C862 333 aa14.79□□□□□ -0.04
SHOX2-202ENST00000425436 BMP2P12643 396 aa14.79□□□□□ -0.04
SHOX2-202ENST00000425436 COX7A2P14406 83 aa14.79□□□□□ -0.04
SHOX2-202ENST00000425436 ATP6V1B2P21281 511 aa14.79□□□□□ -0.04
SHOX2-202ENST00000425436 TACR1P25103 407 aa14.79□□□□□ -0.04
SHOX2-202ENST00000425436 TIA1P31483 386 aaKnown RBP eCLIP14.79□□□□□ -0.04
SHOX2-202ENST00000425436 RPS13P62277 151 aaKnown RBP14.79□□□□□ -0.04
SHOX2-202ENST00000425436 KLC1Q07866 573 aa14.79□□□□□ -0.04
SHOX2-202ENST00000425436 HKDC1Q2TB90 917 aa14.79□□□□□ -0.04
SHOX2-202ENST00000425436 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.79□□□□□ -0.04
SHOX2-202ENST00000425436 GLYATQ6IB77 296 aa14.79□□□□□ -0.04
SHOX2-202ENST00000425436 IGF2-ASQ6U949 168 aa14.79□□□□□ -0.04
SHOX2-202ENST00000425436 FKBP9P1Q75LS8 142 aa14.79□□□□□ -0.04
SHOX2-202ENST00000425436 BPHLQ86WA6 291 aaPredicted RBP14.79□□□□□ -0.04
SHOX2-202ENST00000425436 GPR135Q8IZ08 494 aa14.79□□□□□ -0.04
SHOX2-202ENST00000425436 C1orf52Q8N6N3 182 aaKnown RBP14.79□□□□□ -0.04
SHOX2-202ENST00000425436 SLC38A9Q8NBW4 561 aa14.79□□□□□ -0.04
SHOX2-202ENST00000425436 PAPD5Q8NDF8 572 aaKnown RBP14.79□□□□□ -0.04
SHOX2-202ENST00000425436 TRPV3Q8NET8 790 aa14.79□□□□□ -0.04
SHOX2-202ENST00000425436 OR2T12Q8NG77 320 aa14.79□□□□□ -0.04
SHOX2-202ENST00000425436 CLHC1Q8NHS4 586 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms