RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 ROPN1BQ9BZX4 212 aaPredicted RBP10.24□□□□□ -0.77
USP49-204ENST00000423567 ROPN1Q9HAT0 212 aaPredicted RBP10.24□□□□□ -0.77
USP49-204ENST00000423567 KCMF1Q9P0J7 381 aa10.24□□□□□ -0.77
USP49-204ENST00000423567 SLC12A4Q9UP95 1085 aa10.24□□□□□ -0.77
USP49-204ENST00000423567 CSAG2Q9Y5P2 127 aa10.24□□□□□ -0.77
USP49-204ENST00000423567 COPG1Q9Y678 874 aaKnown RBP10.24□□□□□ -0.77
USP49-204ENST00000423567 TNRC6AQ8NDV7 1962 aaKnown RBP10.23□□□□□ -0.77
USP49-204ENST00000423567 FCHO1O14526 889 aa10.23□□□□□ -0.77
USP49-204ENST00000423567 GUCY1B2O75343 617 aa10.23□□□□□ -0.77
USP49-204ENST00000423567 CRCPO75575 148 aa10.23□□□□□ -0.77
USP49-204ENST00000423567 OR4F21O95013 312 aa10.23□□□□□ -0.77
USP49-204ENST00000423567 F10P00742 488 aa10.23□□□□□ -0.77
USP49-204ENST00000423567 HMOX2P30519 316 aa10.23□□□□□ -0.77
USP49-204ENST00000423567 BSGP35613 385 aa10.23□□□□□ -0.77
USP49-204ENST00000423567 TNFSF10P50591 281 aa10.23□□□□□ -0.77
USP49-204ENST00000423567 HNRNPFP52597 415 aaKnown RBP10.23□□□□□ -0.77
USP49-204ENST00000423567 PKNOX1P55347 436 aa10.23□□□□□ -0.77
USP49-204ENST00000423567 TNFRSF17Q02223 184 aa10.23□□□□□ -0.77
USP49-204ENST00000423567 BIKQ13323 160 aa10.23□□□□□ -0.77
USP49-204ENST00000423567 PRR30Q53SZ7 412 aaPredicted RBP10.23□□□□□ -0.77
USP49-204ENST00000423567 CFAP157Q5JU67 520 aa10.23□□□□□ -0.77
USP49-204ENST00000423567 FCRLBQ6BAA4 426 aa10.23□□□□□ -0.77
USP49-204ENST00000423567 H3F3CQ6NXT2 135 aa10.23□□□□□ -0.77
USP49-204ENST00000423567 LETMD1Q6P1Q0 360 aa10.23□□□□□ -0.77
USP49-204ENST00000423567 FAM180AQ6UWF9 173 aa10.23□□□□□ -0.77
USP49-204ENST00000423567 ZYG11AQ6WRX3 759 aa10.23□□□□□ -0.77
USP49-204ENST00000423567 RPS19BP1Q86WX3 136 aaKnown RBP10.23□□□□□ -0.77
USP49-204ENST00000423567 CRLF3Q8IUI8 442 aa10.23□□□□□ -0.77
USP49-204ENST00000423567 C4orf33Q8N1A6 199 aa10.23□□□□□ -0.77
USP49-204ENST00000423567 BEST3Q8N1M1 668 aa10.23□□□□□ -0.77
USP49-204ENST00000423567 HORMAD2Q8N7B1 307 aa10.23□□□□□ -0.77
USP49-204ENST00000423567 CDYL2Q8N8U2 506 aa10.23□□□□□ -0.77
USP49-204ENST00000423567 GALNT11Q8NCW6 608 aa10.23□□□□□ -0.77
USP49-204ENST00000423567 CATSPER1Q8NEC5 780 aa10.23□□□□□ -0.77
USP49-204ENST00000423567 OR14A16Q8NHC5 309 aa10.23□□□□□ -0.77
USP49-204ENST00000423567 METTL6Q8TCB7 284 aa10.23□□□□□ -0.77
USP49-204ENST00000423567 ELP5Q8TE02 316 aa10.23□□□□□ -0.77
USP49-204ENST00000423567 TANKQ92844 425 aa10.23□□□□□ -0.77
USP49-204ENST00000423567 SNRNP40Q96DI7 357 aaKnown RBP10.23□□□□□ -0.77
USP49-204ENST00000423567 VMP1Q96GC9 406 aa10.23□□□□□ -0.77
USP49-204ENST00000423567 RBM18Q96H35 190 aaKnown RBP10.23□□□□□ -0.77
USP49-204ENST00000423567 UTP23Q9BRU9 249 aaKnown RBP10.23□□□□□ -0.77
USP49-204ENST00000423567 PARD6BQ9BYG5 372 aa10.23□□□□□ -0.77
USP49-204ENST00000423567 RPF2Q9H7B2 306 aaKnown RBP10.23□□□□□ -0.77
USP49-204ENST00000423567 DDX31Q9H8H2 851 aaKnown RBP10.23□□□□□ -0.77
USP49-204ENST00000423567 BRF2Q9HAW0 419 aa10.23□□□□□ -0.77
USP49-204ENST00000423567 ADAM29Q9UKF5 820 aa10.23□□□□□ -0.77
USP49-204ENST00000423567 A0A0A6YYD5 115 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 TRBV11-1A0A0K0K1C0 115 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 GABRR3A8MPY1 467 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 FOXO6A8MYZ6 492 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 RNF223E7ERA6 249 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 H3BQF6 201 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 MANBAO00462 879 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 PPP6CO00743 305 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 CDK2AP1O14519 115 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 PLIN3O60664 434 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 LDB3O75112 727 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 ULK1O75385 1050 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 EEDO75530 441 aaKnown RBP10.22□□□□□ -0.77
USP49-204ENST00000423567 ETHE1O95571 254 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 PDYNP01213 254 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 PROCP04070 461 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 ENO1P06733 434 aaKnown RBP10.22□□□□□ -0.77
USP49-204ENST00000423567 FAM58BPP0C7Q3 252 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 NR2F6P10588 404 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 HSD3B1P14060 373 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 CPA3P15088 417 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 HSD3B2P26439 372 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 HNRNPH2P55795 449 aaKnown RBP10.22□□□□□ -0.77
USP49-204ENST00000423567 PLIN5Q00G26 463 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 OC90Q02509 493 aaPredicted RBP10.22□□□□□ -0.77
USP49-204ENST00000423567 SLC18A2Q05940 514 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 ASPHQ12797 758 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 ELOAQ14241 798 aaKnown RBP10.22□□□□□ -0.77
USP49-204ENST00000423567 INAQ16352 499 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 CCNYL2Q5T2Q4 361 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 RPUSD3Q6P087 351 aaKnown RBP10.22□□□□□ -0.77
USP49-204ENST00000423567 SH2D5Q6ZV89 423 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 KIF2BQ8N4N8 673 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 MREGQ8N565 214 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 MORN4Q8NDC4 146 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 NFAM1Q8NET5 270 aaPredicted RBP10.22□□□□□ -0.77
USP49-204ENST00000423567 NCLNQ969V3 563 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 APOPT1Q96IL0 206 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 C5orf34Q96MH7 638 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 DGAT2Q96PD7 388 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 PELOQ9BRX2 385 aaKnown RBP10.22□□□□□ -0.77
USP49-204ENST00000423567 CDCP1Q9H5V8 836 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 ASF1BQ9NVP2 202 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 COPS7AQ9UBW8 275 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 VTI1BQ9UEU0 232 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 EMCNQ9ULC0 261 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 ATG4BQ9Y4P1 393 aa10.22□□□□□ -0.77
USP49-204ENST00000423567 C17orf105B2RV13 164 aa10.21□□□□□ -0.77
USP49-204ENST00000423567 G3V2L1 256 aa10.21□□□□□ -0.77
USP49-204ENST00000423567 TGFBR3LH3BV60 316 aa10.21□□□□□ -0.77
USP49-204ENST00000423567 PROM1O43490 865 aa10.21□□□□□ -0.77
USP49-204ENST00000423567 TMPRSS11DO60235 418 aa10.21□□□□□ -0.77
USP49-204ENST00000423567 OR10H2O60403 315 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms