RNA–Protein interactions for RNA: ENST00000419582.5

PTPA-213, Transcript of protein phosphatase 2 phosphatase activator, human

TSL 1 (best) BASIC

Gene PTPA, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPA-213	ENST00000419582	RUNX1T1	Q06455	604 aa		13.79	□□□□□ -0.2
PTPA-213	ENST00000419582	FOXF2	Q12947	444 aa		13.79	□□□□□ -0.2
PTPA-213	ENST00000419582	RCAN2	Q14206	197 aa		13.79	□□□□□ -0.2
PTPA-213	ENST00000419582	WIPI1	Q5MNZ9	446 aa	Predicted RBP	13.79	□□□□□ -0.2
PTPA-213	ENST00000419582	LUZP2	Q86TE4	346 aa		13.79	□□□□□ -0.2
PTPA-213	ENST00000419582	ANKRD53	Q8N9V6	530 aa		13.79	□□□□□ -0.2
PTPA-213	ENST00000419582	OR56A3	Q8NH54	315 aa		13.79	□□□□□ -0.2
PTPA-213	ENST00000419582	TMEM171	Q8WVE6	324 aa		13.79	□□□□□ -0.2
PTPA-213	ENST00000419582	ALG3	Q92685	438 aa		13.79	□□□□□ -0.2
PTPA-213	ENST00000419582	KLHL31	Q9H511	634 aa		13.79	□□□□□ -0.2
PTPA-213	ENST00000419582	ABHD10	Q9NUJ1	306 aa		13.79	□□□□□ -0.2
PTPA-213	ENST00000419582	CDC42EP3	Q9UKI2	254 aa		13.79	□□□□□ -0.2
PTPA-213	ENST00000419582	CNOT11	Q9UKZ1	510 aa	Known RBP	13.79	□□□□□ -0.2
PTPA-213	ENST00000419582	CAMK2A	Q9UQM7	478 aa		13.79	□□□□□ -0.2
PTPA-213	ENST00000419582	ZNF148	Q9UQR1	794 aa		13.79	□□□□□ -0.2
PTPA-213	ENST00000419582	SVEP1	Q4LDE5	3571 aa		13.78	□□□□□ -0.2
PTPA-213	ENST00000419582		A8MV72	311 aa	Predicted RBP	13.78	□□□□□ -0.2
PTPA-213	ENST00000419582	C4orf51	C9J302	202 aa		13.78	□□□□□ -0.2
PTPA-213	ENST00000419582	RNF223	E7ERA6	249 aa		13.78	□□□□□ -0.2
PTPA-213	ENST00000419582	CYR61	O00622	381 aa		13.78	□□□□□ -0.2
PTPA-213	ENST00000419582	C8G	P07360	202 aa		13.78	□□□□□ -0.2
PTPA-213	ENST00000419582	NID1	P14543	1247 aa		13.78	□□□□□ -0.2
PTPA-213	ENST00000419582	MAGEA1	P43355	309 aa		13.78	□□□□□ -0.2
PTPA-213	ENST00000419582	HNRNPF	P52597	415 aa	Known RBP	13.78	□□□□□ -0.2
PTPA-213	ENST00000419582	ATP5J2	P56134	94 aa		13.78	□□□□□ -0.2
PTPA-213	ENST00000419582	CCZ1B	P86790	482 aa		13.78	□□□□□ -0.2
PTPA-213	ENST00000419582	CCZ1	P86791	482 aa	Predicted RBP	13.78	□□□□□ -0.2
PTPA-213	ENST00000419582	CUL1	Q13616	776 aa		13.78	□□□□□ -0.2
PTPA-213	ENST00000419582	EFTUD2	Q15029	972 aa	Known RBP eCLIP	13.78	□□□□□ -0.2	1e-6	■■■□□ 15.7
PTPA-213	ENST00000419582	DUPD1	Q68J44	220 aa		13.78	□□□□□ -0.2
PTPA-213	ENST00000419582	AADACL2	Q6P093	401 aa		13.78	□□□□□ -0.2
PTPA-213	ENST00000419582	SCIMP	Q6UWF3	145 aa		13.78	□□□□□ -0.2
PTPA-213	ENST00000419582	OTUD6B	Q8N6M0	293 aa		13.78	□□□□□ -0.2
PTPA-213	ENST00000419582	TMEM52	Q8NDY8	209 aa		13.78	□□□□□ -0.2
PTPA-213	ENST00000419582	SLC22A8	Q8TCC7	542 aa		13.78	□□□□□ -0.2
PTPA-213	ENST00000419582	SLC2A12	Q8TD20	617 aa		13.78	□□□□□ -0.2
PTPA-213	ENST00000419582	WNT2B	Q93097	391 aa		13.78	□□□□□ -0.2
PTPA-213	ENST00000419582	MFSD3	Q96ES6	412 aa		13.78	□□□□□ -0.2
PTPA-213	ENST00000419582	PIK3IP1	Q96FE7	263 aa		13.78	□□□□□ -0.2
PTPA-213	ENST00000419582	UGT2B28	Q9BY64	529 aa		13.78	□□□□□ -0.2
PTPA-213	ENST00000419582	ALOXE3	Q9BYJ1	711 aa		13.78	□□□□□ -0.2
PTPA-213	ENST00000419582	AMBRA1	Q9C0C7	1298 aa		13.78	□□□□□ -0.2
PTPA-213	ENST00000419582	AICDA	Q9GZX7	198 aa		13.78	□□□□□ -0.2
PTPA-213	ENST00000419582	EIF2B3	Q9NR50	452 aa	Known RBP	13.78	□□□□□ -0.2
PTPA-213	ENST00000419582	YAE1D1	Q9NRH1	226 aa		13.78	□□□□□ -0.2
PTPA-213	ENST00000419582	RAB6B	Q9NRW1	208 aa		13.78	□□□□□ -0.2
PTPA-213	ENST00000419582	TMEM160	Q9NX00	188 aa		13.78	□□□□□ -0.2
PTPA-213	ENST00000419582	BFAR	Q9NZS9	450 aa		13.78	□□□□□ -0.2
PTPA-213	ENST00000419582	COMMD10	Q9Y6G5	202 aa		13.78	□□□□□ -0.2
PTPA-213	ENST00000419582	NCKAP5	O14513	1909 aa		13.78	□□□□□ -0.2
PTPA-213	ENST00000419582	FREM3	P0C091	2139 aa		13.78	□□□□□ -0.2
PTPA-213	ENST00000419582	TENM1	Q9UKZ4	2725 aa		13.77	□□□□□ -0.2
PTPA-213	ENST00000419582	LRRC14B	A6NHZ5	514 aa		13.77	□□□□□ -0.21
PTPA-213	ENST00000419582	IFNA16	P05015	189 aa		13.77	□□□□□ -0.21
PTPA-213	ENST00000419582	APRT	P07741	180 aa		13.77	□□□□□ -0.21
PTPA-213	ENST00000419582	FBXO45	P0C2W1	286 aa		13.77	□□□□□ -0.21
PTPA-213	ENST00000419582	GDF1	P27539	372 aa		13.77	□□□□□ -0.21
PTPA-213	ENST00000419582	ASPH	Q12797	758 aa		13.77	□□□□□ -0.21
PTPA-213	ENST00000419582	SP140	Q13342	867 aa		13.77	□□□□□ -0.21
PTPA-213	ENST00000419582	CTBP1	Q13363	440 aa		13.77	□□□□□ -0.21
PTPA-213	ENST00000419582	SERTAD2	Q14140	314 aa		13.77	□□□□□ -0.21
PTPA-213	ENST00000419582	CSHL1	Q14406	222 aa		13.77	□□□□□ -0.21
PTPA-213	ENST00000419582	CLEC12B	Q2HXU8	276 aa		13.77	□□□□□ -0.21
PTPA-213	ENST00000419582	ZNF321P	Q8N8H1	164 aa		13.77	□□□□□ -0.21
PTPA-213	ENST00000419582	GABPB2	Q8TAK5	448 aa	Predicted RBP	13.77	□□□□□ -0.21
PTPA-213	ENST00000419582	CD200R1	Q8TD46	325 aa		13.77	□□□□□ -0.21
PTPA-213	ENST00000419582	ZNF721	Q8TF20	911 aa		13.77	□□□□□ -0.21
PTPA-213	ENST00000419582	OR4K3	Q96R72	315 aa		13.77	□□□□□ -0.21
PTPA-213	ENST00000419582	DOHH	Q9BU89	302 aa		13.77	□□□□□ -0.21
PTPA-213	ENST00000419582	C19orf24	Q9BVV8	132 aa		13.77	□□□□□ -0.21
PTPA-213	ENST00000419582	ANGPTL4	Q9BY76	406 aa		13.77	□□□□□ -0.21
PTPA-213	ENST00000419582	OR8D2	Q9GZM6	311 aa		13.77	□□□□□ -0.21
PTPA-213	ENST00000419582	SPNS1	Q9H2V7	528 aa		13.77	□□□□□ -0.21
PTPA-213	ENST00000419582	IFNK	Q9P0W0	207 aa		13.77	□□□□□ -0.21
PTPA-213	ENST00000419582	PACSIN3	Q9UKS6	424 aa		13.77	□□□□□ -0.21
PTPA-213	ENST00000419582	NIN	Q8N4C6	2090 aa		13.76	□□□□□ -0.21
PTPA-213	ENST00000419582	CTAGE15	A4D2H0	777 aa		13.76	□□□□□ -0.21
PTPA-213	ENST00000419582	SNX4	O95219	450 aa		13.76	□□□□□ -0.21
PTPA-213	ENST00000419582	ACTL6A	O96019	429 aa		13.76	□□□□□ -0.21
PTPA-213	ENST00000419582	IGKV3-11	P04433	115 aa		13.76	□□□□□ -0.21
PTPA-213	ENST00000419582	CRH	P06850	196 aa		13.76	□□□□□ -0.21
PTPA-213	ENST00000419582	CHM	P24386	653 aa		13.76	□□□□□ -0.21
PTPA-213	ENST00000419582	SERPINB3	P29508	390 aa		13.76	□□□□□ -0.21
PTPA-213	ENST00000419582	HNF4A	P41235	474 aa		13.76	□□□□□ -0.21
PTPA-213	ENST00000419582	SLCO1A2	P46721	670 aa		13.76	□□□□□ -0.21
PTPA-213	ENST00000419582	RPL21	P46778	160 aa	Known RBP	13.76	□□□□□ -0.21
PTPA-213	ENST00000419582	SESN2	P58004	480 aa	Predicted RBP	13.76	□□□□□ -0.21
PTPA-213	ENST00000419582	STXBP1	P61764	594 aa	Known RBP	13.76	□□□□□ -0.21
PTPA-213	ENST00000419582	BTN3A2	P78410	334 aa		13.76	□□□□□ -0.21
PTPA-213	ENST00000419582	CRADD	P78560	199 aa		13.76	□□□□□ -0.21
PTPA-213	ENST00000419582	REEP5	Q00765	189 aa		13.76	□□□□□ -0.21
PTPA-213	ENST00000419582	FAM27E3	Q08E93	113 aa		13.76	□□□□□ -0.21
PTPA-213	ENST00000419582	RCN2	Q14257	317 aa		13.76	□□□□□ -0.21
PTPA-213	ENST00000419582	OASL	Q15646	514 aa	Known RBP	13.76	□□□□□ -0.21
PTPA-213	ENST00000419582	PRAMEF20	Q5VT98	475 aa		13.76	□□□□□ -0.21
PTPA-213	ENST00000419582	NEPRO	Q6NW34	567 aa		13.76	□□□□□ -0.21
PTPA-213	ENST00000419582	ZNF549	Q6P9A3	640 aa		13.76	□□□□□ -0.21
PTPA-213	ENST00000419582	SH2D5	Q6ZV89	423 aa		13.76	□□□□□ -0.21
PTPA-213	ENST00000419582	PIWIL4	Q7Z3Z4	852 aa	Known RBP	13.76	□□□□□ -0.21
PTPA-213	ENST00000419582	CTAGE6	Q86UF2	777 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 49 ms