RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 C4orf33Q8N1A6 199 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 CIARTQ8N365 385 aaPredicted RBP2.48□□□□□ -2.01
VPS41-206ENST00000418457 FBXO39Q8N4B4 442 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 MARVELD2Q8N4S9 558 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 NIPA2Q8N8Q9 360 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 ICA1LQ8NDH6 482 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 WDR20Q8TBZ3 569 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 GRAPLQ8TC17 118 aaPredicted RBP2.48□□□□□ -2.01
VPS41-206ENST00000418457 TCP10LQ8TDR4 215 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 PYROXD1Q8WU10 500 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 FAM172AQ8WUF8 416 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 RSPH1Q8WYR4 309 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 LPGAT1Q92604 370 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 HAUS1Q96CS2 278 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 LRRC39Q96DD0 335 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 ERLEC1Q96DZ1 483 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 MTERF3Q96E29 417 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 ST6GAL2Q96JF0 529 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 PRMT6Q96LA8 375 aaPredicted RBP2.48□□□□□ -2.01
VPS41-206ENST00000418457 C9orf72Q96LT7 481 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 UHRF2Q96PU4 802 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 OR6C1Q96RD1 312 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 NODALQ96S42 347 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 KCNK16Q96T55 309 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 PCDHB18PQ96TA0 734 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 SERPINI1Q99574 410 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 TRMT61BQ9BVS5 477 aaKnown RBP2.48□□□□□ -2.01
VPS41-206ENST00000418457 TEKT3Q9BXF9 490 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 KLHL4Q9C0H6 718 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 TMEM117Q9H0C3 514 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 MMP28Q9H239 520 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 CPVLQ9H3G5 476 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 SLA2Q9H6Q3 261 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 DHX33Q9H6R0 707 aaKnown RBP2.48□□□□□ -2.01
VPS41-206ENST00000418457 HHATLQ9HCP6 504 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 ZNF334Q9HCZ1 680 aaPredicted RBP2.48□□□□□ -2.01
VPS41-206ENST00000418457 SLCO1B3Q9NPD5 702 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 MBNL1Q9NR56 388 aaKnown RBP2.48□□□□□ -2.01
VPS41-206ENST00000418457 PARVAQ9NVD7 372 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 FAM118AQ9NWS6 357 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 C6orf203Q9P0P8 240 aaPredicted RBP2.48□□□□□ -2.01
VPS41-206ENST00000418457 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.48□□□□□ -2.01
VPS41-206ENST00000418457 MORF4L1Q9UBU8 362 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 NARFQ9UHQ1 456 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 ITGA11Q9UKX5 1188 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 RAB26Q9ULW5 256 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 PPIEQ9UNP9 301 aaKnown RBP2.48□□□□□ -2.01
VPS41-206ENST00000418457 WBP11Q9Y2W2 641 aaKnown RBP2.48□□□□□ -2.01
VPS41-206ENST00000418457 MAGED1Q9Y5V3 778 aaPredicted RBP2.48□□□□□ -2.01
VPS41-206ENST00000418457 WDR81Q562E7 1941 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 LTBP1Q14766 1721 aa2.48□□□□□ -2.01
VPS41-206ENST00000418457 SIPA1L1O43166 1804 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 ARID2Q68CP9 1835 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 MYH9P35579 1960 aaKnown RBP2.47□□□□□ -2.01
VPS41-206ENST00000418457 TCF20Q9UGU0 1960 aaKnown RBP2.47□□□□□ -2.01
VPS41-206ENST00000418457 hCG_1818297A0A087WSY0 165 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 GOLGA8QA0A0J9YX86 632 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 TEX13DA0A0J9YY54 714 aaPredicted RBP2.47□□□□□ -2.01
VPS41-206ENST00000418457 PRSS51A0A1B0GVH4 220 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 MED19A0JLT2 244 aaPredicted RBP2.47□□□□□ -2.01
VPS41-206ENST00000418457 ELOVL7A1L3X0 281 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 CCDC162PA2VCL2 907 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 GOLGA8OA6NCC3 632 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 FAM86B1E9PN63 330 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 GOLGA8NF8WBI6 632 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 ZNF701M0R085 212 aaPredicted RBP2.47□□□□□ -2.01
VPS41-206ENST00000418457 SGK1O00141 431 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 COPEO14579 308 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 TO15178 435 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 WDR46O15213 610 aaKnown RBP2.47□□□□□ -2.01
VPS41-206ENST00000418457 SLC22A2O15244 555 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 CHADO15335 359 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 ADAM20O43506 726 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 PRKNO60260 465 aaPredicted RBP2.47□□□□□ -2.01
VPS41-206ENST00000418457 BBOX1O75936 387 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 CLPTM1O96005 669 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 H1F0P07305 194 aaKnown RBP2.47□□□□□ -2.01
VPS41-206ENST00000418457 INHBAP08476 426 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 KRT7P08729 469 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 SNRPAP09012 282 aaKnown RBP2.47□□□□□ -2.01
VPS41-206ENST00000418457 FAM86B2P0C5J1 330 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 POLR2MP0CAP2 368 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 UBTFL6P0CB48 400 aaPredicted RBP2.47□□□□□ -2.01
VPS41-206ENST00000418457 ZCCHC18P0CG32 403 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 MYL2P10916 166 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 EEF2P13639 858 aaKnown RBP2.47□□□□□ -2.01
VPS41-206ENST00000418457 CKMT2P17540 419 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 VCLP18206 1134 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 GLRA2P23416 452 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 HMGB2P26583 209 aaKnown RBP2.47□□□□□ -2.01
VPS41-206ENST00000418457 GCLMP48507 274 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 NR2C2P49116 596 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 LIG4P49917 911 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 AP3M2P53677 418 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 NUP107P57740 925 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 NLRP11P59045 1033 aaKnown RBP2.47□□□□□ -2.01
VPS41-206ENST00000418457 YWHAEP62258 255 aaKnown RBP2.47□□□□□ -2.01
VPS41-206ENST00000418457 HPCAP84074 193 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 MFAP5Q13361 173 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 PIGHQ14442 188 aaPredicted RBP2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms