RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 MILR1Q7Z6M3 343 aa19.22■□□□□ 0.67
PKNOX1-202ENST00000418336 GPR180Q86V85 440 aa19.22■□□□□ 0.67
PKNOX1-202ENST00000418336 RPS19BP1Q86WX3 136 aaKnown RBP19.22■□□□□ 0.67
PKNOX1-202ENST00000418336 CNPY4Q8N129 248 aa19.22■□□□□ 0.67
PKNOX1-202ENST00000418336 SLC5A8Q8N695 610 aa19.22■□□□□ 0.67
PKNOX1-202ENST00000418336 MYRIPQ8NFW9 859 aa19.22■□□□□ 0.67
PKNOX1-202ENST00000418336 TRPC4APQ8TEL6 797 aa19.22■□□□□ 0.67
PKNOX1-202ENST00000418336 NCLNQ969V3 563 aa19.22■□□□□ 0.67
PKNOX1-202ENST00000418336 ALOXE3Q9BYJ1 711 aa19.22■□□□□ 0.67
PKNOX1-202ENST00000418336 C12orf65Q9H3J6 166 aaKnown RBP19.22■□□□□ 0.67
PKNOX1-202ENST00000418336 PPCSQ9HAB8 311 aa19.22■□□□□ 0.67
PKNOX1-202ENST00000418336 ANKRD10Q9NXR5 420 aa19.22■□□□□ 0.67
PKNOX1-202ENST00000418336 TRPS1Q9UHF7 1281 aa19.22■□□□□ 0.67
PKNOX1-202ENST00000418336 GABRR3A8MPY1 467 aa19.21■□□□□ 0.67
PKNOX1-202ENST00000418336 SEMA7AO75326 666 aa19.21■□□□□ 0.67
PKNOX1-202ENST00000418336 OR4F21O95013 312 aa19.21■□□□□ 0.67
PKNOX1-202ENST00000418336 OTCP00480 354 aa19.21■□□□□ 0.67
PKNOX1-202ENST00000418336 PDYNP01213 254 aa19.21■□□□□ 0.67
PKNOX1-202ENST00000418336 NUDT17P0C025 328 aa19.21■□□□□ 0.67
PKNOX1-202ENST00000418336 CPN2P22792 545 aa19.21■□□□□ 0.67
PKNOX1-202ENST00000418336 TRHRP34981 398 aaPredicted RBP19.21■□□□□ 0.67
PKNOX1-202ENST00000418336 RAP1GDS1P52306 607 aa19.21■□□□□ 0.67
PKNOX1-202ENST00000418336 ID2Q02363 134 aa19.21■□□□□ 0.67
PKNOX1-202ENST00000418336 SLC18A2Q05940 514 aa19.21■□□□□ 0.67
PKNOX1-202ENST00000418336 GALNT1Q10472 559 aaPredicted RBP19.21■□□□□ 0.67
PKNOX1-202ENST00000418336 UBAP2LQ14157 1087 aaKnown RBP19.21■□□□□ 0.67
PKNOX1-202ENST00000418336 TCHHL1Q5QJ38 904 aaPredicted RBP19.21■□□□□ 0.67
PKNOX1-202ENST00000418336 C10orf62Q5T681 223 aaPredicted RBP19.21■□□□□ 0.67
PKNOX1-202ENST00000418336 ATP6V1E2Q96A05 226 aa19.21■□□□□ 0.67
PKNOX1-202ENST00000418336 ZNF382Q96SR6 550 aa19.21■□□□□ 0.67
PKNOX1-202ENST00000418336 SERPINI1Q99574 410 aa19.21■□□□□ 0.67
PKNOX1-202ENST00000418336 CCDC77Q9BR77 488 aa19.21■□□□□ 0.67
PKNOX1-202ENST00000418336 DCDC2Q9UHG0 476 aa19.21■□□□□ 0.67
PKNOX1-202ENST00000418336 USP9YO00507 2555 aaPredicted RBP19.21■□□□□ 0.67
PKNOX1-202ENST00000418336 TRBV11-1A0A0K0K1C0 115 aa19.2■□□□□ 0.66
PKNOX1-202ENST00000418336 A0A1W2PS29 197 aa19.2■□□□□ 0.66
PKNOX1-202ENST00000418336 SYNDIG1LA6NDD5 238 aa19.2■□□□□ 0.66
PKNOX1-202ENST00000418336 UBFD1O14562 309 aaKnown RBP19.2■□□□□ 0.66
PKNOX1-202ENST00000418336 GBAP04062 536 aa19.2■□□□□ 0.66
PKNOX1-202ENST00000418336 FAM58BPP0C7Q3 252 aa19.2■□□□□ 0.66
PKNOX1-202ENST00000418336 TAC1P20366 129 aa19.2■□□□□ 0.66
PKNOX1-202ENST00000418336 RCN2Q14257 317 aa19.2■□□□□ 0.66
PKNOX1-202ENST00000418336 SPINK14Q6IE38 97 aa19.2■□□□□ 0.66
PKNOX1-202ENST00000418336 ZYG11AQ6WRX3 759 aa19.2■□□□□ 0.66
PKNOX1-202ENST00000418336 OR4N5Q8IXE1 308 aa19.2■□□□□ 0.66
PKNOX1-202ENST00000418336 METTL4Q8N3J2 472 aa19.2■□□□□ 0.66
PKNOX1-202ENST00000418336 FAM26EQ8N5C1 309 aa19.2■□□□□ 0.66
PKNOX1-202ENST00000418336 ST6GALNAC3Q8NDV1 305 aa19.2■□□□□ 0.66
PKNOX1-202ENST00000418336 ZNF721Q8TF20 911 aa19.2■□□□□ 0.66
PKNOX1-202ENST00000418336 VMP1Q96GC9 406 aa19.2■□□□□ 0.66
PKNOX1-202ENST00000418336 MRPL1Q9BYD6 325 aaKnown RBP19.2■□□□□ 0.66
PKNOX1-202ENST00000418336 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.2■□□□□ 0.662e-10■■■■■ 29
PKNOX1-202ENST00000418336 TEX10Q9NXF1 929 aaPredicted RBP19.2■□□□□ 0.66
PKNOX1-202ENST00000418336 MS4A12Q9NXJ0 267 aa19.2■□□□□ 0.66
PKNOX1-202ENST00000418336 ASPDHA6ND91 283 aa19.19■□□□□ 0.66
PKNOX1-202ENST00000418336 CDK2AP1O14519 115 aa19.19■□□□□ 0.66
PKNOX1-202ENST00000418336 PLIN3O60664 434 aa19.19■□□□□ 0.66
PKNOX1-202ENST00000418336 GLRA3O75311 464 aa19.19■□□□□ 0.66
PKNOX1-202ENST00000418336 SUPT7LO94864 414 aa19.19■□□□□ 0.66
PKNOX1-202ENST00000418336 SLU7O95391 586 aaKnown RBP19.19■□□□□ 0.66
PKNOX1-202ENST00000418336 AIFM1O95831 613 aa19.19■□□□□ 0.66
PKNOX1-202ENST00000418336 IGKV3-11P04433 115 aa19.19■□□□□ 0.66
PKNOX1-202ENST00000418336 MST1P26927 711 aa19.19■□□□□ 0.66
PKNOX1-202ENST00000418336 CRHR1P34998 444 aa19.19■□□□□ 0.66
PKNOX1-202ENST00000418336 STT3AP46977 705 aa19.19■□□□□ 0.66
PKNOX1-202ENST00000418336 HTR6P50406 440 aa19.19■□□□□ 0.66
PKNOX1-202ENST00000418336 CLCN2P51788 898 aa19.19■□□□□ 0.66
PKNOX1-202ENST00000418336 TAS2R50P59544 299 aa19.19■□□□□ 0.66
PKNOX1-202ENST00000418336 PHEXP78562 749 aa19.19■□□□□ 0.66
PKNOX1-202ENST00000418336 FOLH1Q04609 750 aa19.19■□□□□ 0.66
PKNOX1-202ENST00000418336 SRSF11Q05519 484 aaKnown RBP19.19■□□□□ 0.66
PKNOX1-202ENST00000418336 OR1C1Q15619 314 aa19.19■□□□□ 0.66
PKNOX1-202ENST00000418336 EIF2S3LQ2VIR3 472 aaKnown RBP19.19■□□□□ 0.66
PKNOX1-202ENST00000418336 ZNF766Q5HY98 468 aa19.19■□□□□ 0.66
PKNOX1-202ENST00000418336 NUDT13Q86X67 352 aa19.19■□□□□ 0.66
PKNOX1-202ENST00000418336 MORN4Q8NDC4 146 aa19.19■□□□□ 0.66
PKNOX1-202ENST00000418336 CAVIN3Q969G5 261 aa19.19■□□□□ 0.66
PKNOX1-202ENST00000418336 SLC29A3Q9BZD2 475 aa19.19■□□□□ 0.66
PKNOX1-202ENST00000418336 RPF2Q9H7B2 306 aaKnown RBP19.19■□□□□ 0.66
PKNOX1-202ENST00000418336 LYARQ9NX58 379 aaKnown RBP19.19■□□□□ 0.66
PKNOX1-202ENST00000418336 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.19■□□□□ 0.66
PKNOX1-202ENST00000418336 PHF11Q9UIL8 331 aa19.19■□□□□ 0.66
PKNOX1-202ENST00000418336 ADAM29Q9UKF5 820 aa19.19■□□□□ 0.66
PKNOX1-202ENST00000418336 V9GYY5 206 aaPredicted RBP19.19■□□□□ 0.66
PKNOX1-202ENST00000418336 SMIM23A6NLE4 172 aa19.18■□□□□ 0.66
PKNOX1-202ENST00000418336 HRKO00198 91 aa19.18■□□□□ 0.66
PKNOX1-202ENST00000418336 MANBAO00462 879 aa19.18■□□□□ 0.66
PKNOX1-202ENST00000418336 ZNF354AO60765 605 aaPredicted RBP19.18■□□□□ 0.66
PKNOX1-202ENST00000418336 CDH16O75309 829 aa19.18■□□□□ 0.66
PKNOX1-202ENST00000418336 CLPSP04118 112 aa19.18■□□□□ 0.66
PKNOX1-202ENST00000418336 CHN1P15882 459 aa19.18■□□□□ 0.66
PKNOX1-202ENST00000418336 PMP22Q01453 160 aa19.18■□□□□ 0.66
PKNOX1-202ENST00000418336 IFT88Q13099 833 aa19.18■□□□□ 0.66
PKNOX1-202ENST00000418336 SERTAD2Q14140 314 aa19.18■□□□□ 0.66
PKNOX1-202ENST00000418336 C16orf47Q6ZP98 133 aaPredicted RBP19.18■□□□□ 0.66
PKNOX1-202ENST00000418336 SLC22A9Q8IVM8 553 aa19.18■□□□□ 0.66
PKNOX1-202ENST00000418336 TMEM132CQ8N3T6 1108 aa19.18■□□□□ 0.66
PKNOX1-202ENST00000418336 OR14A16Q8NHC5 309 aa19.18■□□□□ 0.66
PKNOX1-202ENST00000418336 SLC2A12Q8TD20 617 aa19.18■□□□□ 0.66
PKNOX1-202ENST00000418336 AGAP11Q8TF27 550 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms