RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 A0A1W2PPB8 328 aa20.21■□□□□ 0.83
ACTB-203ENST00000417101 A0A1W2PRS3 328 aa20.21■□□□□ 0.83
ACTB-203ENST00000417101 FAM166BA8MTA8 275 aa20.21■□□□□ 0.83
ACTB-203ENST00000417101 KIR3DP1A8MWS1 328 aa20.21■□□□□ 0.83
ACTB-203ENST00000417101 SUPT3HB4E1H0 165 aa20.21■□□□□ 0.83
ACTB-203ENST00000417101 UBXN8O00124 270 aa20.21■□□□□ 0.83
ACTB-203ENST00000417101 SAP18O00422 153 aaKnown RBP20.21■□□□□ 0.83
ACTB-203ENST00000417101 SUPT3HO75486 399 aa20.21■□□□□ 0.83
ACTB-203ENST00000417101 SLC35E2BP0CK96 405 aa20.21■□□□□ 0.83
ACTB-203ENST00000417101 POU3F2P20265 443 aaPredicted RBP20.21■□□□□ 0.83
ACTB-203ENST00000417101 HIST1H1TP22492 207 aaPredicted RBP20.21■□□□□ 0.83
ACTB-203ENST00000417101 RNF4P78317 190 aa20.21■□□□□ 0.83
ACTB-203ENST00000417101 E2F2Q14209 437 aa20.21■□□□□ 0.83
ACTB-203ENST00000417101 AP5B1Q2VPB7 878 aa20.21■□□□□ 0.83
ACTB-203ENST00000417101 ZNF750Q32MQ0 723 aa20.21■□□□□ 0.83
ACTB-203ENST00000417101 MED27Q6P2C8 311 aa20.21■□□□□ 0.83
ACTB-203ENST00000417101 CHSY3Q70JA7 882 aa20.21■□□□□ 0.83
ACTB-203ENST00000417101 TBC1D1Q86TI0 1168 aaPredicted RBP20.21■□□□□ 0.83
ACTB-203ENST00000417101 LAS2Q8IYD9 372 aa20.21■□□□□ 0.83
ACTB-203ENST00000417101 PHACTR1Q9C0D0 580 aa20.21■□□□□ 0.83
ACTB-203ENST00000417101 NMRAL1Q9HBL8 299 aa20.21■□□□□ 0.83
ACTB-203ENST00000417101 OPTCQ9UBM4 332 aa20.21■□□□□ 0.83
ACTB-203ENST00000417101 K7EPI3 171 aa20.2■□□□□ 0.82
ACTB-203ENST00000417101 ACOT7O00154 380 aa20.2■□□□□ 0.82
ACTB-203ENST00000417101 SSR2P43308 183 aa20.2■□□□□ 0.82
ACTB-203ENST00000417101 TMEM211Q6ICI0 200 aa20.2■□□□□ 0.82
ACTB-203ENST00000417101 PAOXQ6QHF9 649 aa20.2■□□□□ 0.82
ACTB-203ENST00000417101 MEX3BQ6ZN04 569 aaKnown RBP20.2■□□□□ 0.82
ACTB-203ENST00000417101 OR7G3Q8NG95 312 aa20.2■□□□□ 0.82
ACTB-203ENST00000417101 ANKRD9Q96BM1 317 aaPredicted RBP20.2■□□□□ 0.82
ACTB-203ENST00000417101 SCYL1Q96KG9 808 aa20.2■□□□□ 0.82
ACTB-203ENST00000417101 ATOH8Q96SQ7 321 aa20.2■□□□□ 0.82
ACTB-203ENST00000417101 ENKD1Q9H0I2 346 aa20.2■□□□□ 0.82
ACTB-203ENST00000417101 OR51B5Q9H339 312 aa20.2■□□□□ 0.82
ACTB-203ENST00000417101 TP63Q9H3D4 680 aaPredicted RBP20.2■□□□□ 0.82
ACTB-203ENST00000417101 IGSF5Q9NSI5 407 aa20.2■□□□□ 0.82
ACTB-203ENST00000417101 ZNF407Q9C0G0 2248 aa20.19■□□□□ 0.82
ACTB-203ENST00000417101 ZNF354AO60765 605 aaPredicted RBP20.19■□□□□ 0.82
ACTB-203ENST00000417101 KERAO60938 352 aa20.19■□□□□ 0.82
ACTB-203ENST00000417101 SCELO95171 688 aa20.19■□□□□ 0.82
ACTB-203ENST00000417101 ETHE1O95571 254 aa20.19■□□□□ 0.82
ACTB-203ENST00000417101 CPN2P22792 545 aa20.19■□□□□ 0.82
ACTB-203ENST00000417101 CRABP2P29373 138 aa20.19■□□□□ 0.82
ACTB-203ENST00000417101 MAGEA4P43358 317 aa20.19■□□□□ 0.82
ACTB-203ENST00000417101 DDX39BQ13838 428 aaKnown RBP20.19■□□□□ 0.82
ACTB-203ENST00000417101 EMC4Q5J8M3 183 aa20.19■□□□□ 0.82
ACTB-203ENST00000417101 KHDRBS2Q5VWX1 349 aaKnown RBP20.19■□□□□ 0.82
ACTB-203ENST00000417101 RTL4Q6ZR62 310 aa20.19■□□□□ 0.82
ACTB-203ENST00000417101 OR4N5Q8IXE1 308 aa20.19■□□□□ 0.82
ACTB-203ENST00000417101 RPRMLQ8N4K4 120 aa20.19■□□□□ 0.82
ACTB-203ENST00000417101 OR5L2Q8NGL0 311 aa20.19■□□□□ 0.82
ACTB-203ENST00000417101 OR8K3Q8NH51 312 aa20.19■□□□□ 0.82
ACTB-203ENST00000417101 FBXO25Q8TCJ0 367 aa20.19■□□□□ 0.82
ACTB-203ENST00000417101 FBF1Q8TES7 1133 aa20.19■□□□□ 0.82
ACTB-203ENST00000417101 UBTD2Q8WUN7 234 aa20.19■□□□□ 0.82
ACTB-203ENST00000417101 ANP32BQ92688 251 aaKnown RBP20.19■□□□□ 0.82
ACTB-203ENST00000417101 CMTM7Q96FZ5 175 aa20.19■□□□□ 0.82
ACTB-203ENST00000417101 SORBS1Q9BX66 1292 aaKnown RBP20.19■□□□□ 0.82
ACTB-203ENST00000417101 TTTY12Q9BZ98 90 aa20.19■□□□□ 0.82
ACTB-203ENST00000417101 ZDHHC11Q9H8X9 412 aa20.19■□□□□ 0.82
ACTB-203ENST00000417101 COPS7AQ9UBW8 275 aa20.19■□□□□ 0.82
ACTB-203ENST00000417101 UTP11Q9Y3A2 253 aaKnown RBP20.19■□□□□ 0.82
ACTB-203ENST00000417101 NPIPA2E9PIF3 369 aa20.18■□□□□ 0.82
ACTB-203ENST00000417101 NPIPA3F8WFD2 350 aa20.18■□□□□ 0.82
ACTB-203ENST00000417101 FGF17O60258 216 aa20.18■□□□□ 0.82
ACTB-203ENST00000417101 LTA4HP09960 611 aaKnown RBP20.18■□□□□ 0.82
ACTB-203ENST00000417101 CNR1P21554 472 aa20.18■□□□□ 0.82
ACTB-203ENST00000417101 SERPINB1P30740 379 aa20.18■□□□□ 0.82
ACTB-203ENST00000417101 KRTAP10-9P60411 292 aa20.18■□□□□ 0.82
ACTB-203ENST00000417101 CAV1Q03135 178 aa20.18■□□□□ 0.82
ACTB-203ENST00000417101 SLAMF1Q13291 335 aa20.18■□□□□ 0.82
ACTB-203ENST00000417101 TRADDQ15628 312 aa20.18■□□□□ 0.82
ACTB-203ENST00000417101 DEPDC1Q5TB30 811 aa20.18■□□□□ 0.82
ACTB-203ENST00000417101 OR4C11Q6IEV9 310 aa20.18■□□□□ 0.82
ACTB-203ENST00000417101 OPN5Q6U736 354 aa20.18■□□□□ 0.82
ACTB-203ENST00000417101 RGS9BPQ6ZS82 235 aa20.18■□□□□ 0.82
ACTB-203ENST00000417101 GK5Q6ZS86 529 aa20.18■□□□□ 0.82
ACTB-203ENST00000417101 SLC22A16Q86VW1 577 aa20.18■□□□□ 0.82
ACTB-203ENST00000417101 RNF175Q8N4F7 328 aa20.18■□□□□ 0.82
ACTB-203ENST00000417101 TEX9Q8N6V9 391 aa20.18■□□□□ 0.82
ACTB-203ENST00000417101 ACBD4Q8NC06 268 aa20.18■□□□□ 0.82
ACTB-203ENST00000417101 CHTF18Q8WVB6 975 aa20.18■□□□□ 0.82
ACTB-203ENST00000417101 NXNL1Q96CM4 212 aa20.18■□□□□ 0.82
ACTB-203ENST00000417101 C14orf79Q96F83 325 aa20.18■□□□□ 0.82
ACTB-203ENST00000417101 FAM173AQ9BQD7 235 aa20.18■□□□□ 0.82
ACTB-203ENST00000417101 RNF6Q9Y252 685 aa20.18■□□□□ 0.82
ACTB-203ENST00000417101 GLSO94925 669 aaPredicted RBP20.17■□□□□ 0.82
ACTB-203ENST00000417101 COX7A2P14406 83 aa20.17■□□□□ 0.82
ACTB-203ENST00000417101 EPB42P16452 691 aa20.17■□□□□ 0.82
ACTB-203ENST00000417101 STX2P32856 288 aa20.17■□□□□ 0.82
ACTB-203ENST00000417101 PCDH1Q08174 1060 aa20.17■□□□□ 0.82
ACTB-203ENST00000417101 GRHL2Q6ISB3 625 aa20.17■□□□□ 0.82
ACTB-203ENST00000417101 MYLK4Q86YV6 388 aaPredicted RBP20.17■□□□□ 0.82
ACTB-203ENST00000417101 HUS1BQ8NHY5 278 aa20.17■□□□□ 0.82
ACTB-203ENST00000417101 ZNF721Q8TF20 911 aa20.17■□□□□ 0.82
ACTB-203ENST00000417101 ASB5Q8WWX0 329 aa20.17■□□□□ 0.82
ACTB-203ENST00000417101 RND1Q92730 232 aa20.17■□□□□ 0.82
ACTB-203ENST00000417101 SENP5Q96HI0 755 aaPredicted RBP20.17■□□□□ 0.82
ACTB-203ENST00000417101 SGCZQ96LD1 299 aa20.17■□□□□ 0.82
ACTB-203ENST00000417101 DGAT2Q96PD7 388 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms