RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 ID2Q02363 134 aa13.37□□□□□ -0.27
PAF1-202ENST00000416728 PMPCAQ10713 525 aa13.37□□□□□ -0.27
PAF1-202ENST00000416728 CALCOCO2Q13137 446 aa13.37□□□□□ -0.27
PAF1-202ENST00000416728 ZKSCAN8Q15776 578 aaPredicted RBP13.37□□□□□ -0.27
PAF1-202ENST00000416728 TMEM35AQ53FP2 167 aa13.37□□□□□ -0.27
PAF1-202ENST00000416728 OPN5Q6U736 354 aa13.37□□□□□ -0.27
PAF1-202ENST00000416728 ZNF793Q6ZN11 406 aa13.37□□□□□ -0.27
PAF1-202ENST00000416728 LRRC70Q7Z2Q7 622 aa13.37□□□□□ -0.27
PAF1-202ENST00000416728 UBE3DQ7Z6J8 389 aa13.37□□□□□ -0.27
PAF1-202ENST00000416728 CCDC71Q8IV32 467 aaPredicted RBP13.37□□□□□ -0.27
PAF1-202ENST00000416728 ZNF473Q8WTR7 871 aaKnown RBP13.37□□□□□ -0.27
PAF1-202ENST00000416728 UBXN10Q96LJ8 280 aa13.37□□□□□ -0.27
PAF1-202ENST00000416728 SMC6Q96SB8 1091 aa13.37□□□□□ -0.27
PAF1-202ENST00000416728 MS4A8Q9BY19 250 aa13.37□□□□□ -0.27
PAF1-202ENST00000416728 CD244Q9BZW8 370 aa13.37□□□□□ -0.27
PAF1-202ENST00000416728 PHACTR1Q9C0D0 580 aa13.37□□□□□ -0.27
PAF1-202ENST00000416728 NPDC1Q9NQX5 325 aaPredicted RBP13.37□□□□□ -0.27
PAF1-202ENST00000416728 RNF14Q9UBS8 474 aa13.37□□□□□ -0.27
PAF1-202ENST00000416728 OR14I1A6ND48 311 aa13.36□□□□□ -0.27
PAF1-202ENST00000416728 FIGNL2A6NMB9 653 aa13.36□□□□□ -0.27
PAF1-202ENST00000416728 RTCAO00442 366 aaKnown RBP13.36□□□□□ -0.27
PAF1-202ENST00000416728 BCKDKO14874 412 aa13.36□□□□□ -0.27
PAF1-202ENST00000416728 EIF3HO15372 352 aaKnown RBP eCLIP13.36□□□□□ -0.27
PAF1-202ENST00000416728 TOXO94900 526 aa13.36□□□□□ -0.27
PAF1-202ENST00000416728 GLSO94925 669 aaPredicted RBP13.36□□□□□ -0.27
PAF1-202ENST00000416728 P04436 131 aa13.36□□□□□ -0.27
PAF1-202ENST00000416728 PCNAP12004 261 aa13.36□□□□□ -0.27
PAF1-202ENST00000416728 CPN2P22792 545 aa13.36□□□□□ -0.27
PAF1-202ENST00000416728 SERPINB1P30740 379 aa13.36□□□□□ -0.27
PAF1-202ENST00000416728 CASP2P42575 452 aa13.36□□□□□ -0.27
PAF1-202ENST00000416728 SSR2P43308 183 aa13.36□□□□□ -0.27
PAF1-202ENST00000416728 NUP107P57740 925 aa13.36□□□□□ -0.27
PAF1-202ENST00000416728 MRPS25P82663 173 aaKnown RBP13.36□□□□□ -0.27
PAF1-202ENST00000416728 TFF3Q07654 80 aa13.36□□□□□ -0.27
PAF1-202ENST00000416728 AP5B1Q2VPB7 878 aa13.36□□□□□ -0.27
PAF1-202ENST00000416728 GXYLT1Q4G148 440 aa13.36□□□□□ -0.27
PAF1-202ENST00000416728 MED27Q6P2C8 311 aa13.36□□□□□ -0.27
PAF1-202ENST00000416728 FAM47EQ6ZV65 393 aa13.36□□□□□ -0.27
PAF1-202ENST00000416728 CHSY3Q70JA7 882 aa13.36□□□□□ -0.27
PAF1-202ENST00000416728 CTAGE3PQ8IX95 158 aa13.36□□□□□ -0.27
PAF1-202ENST00000416728 FAM109AQ8N4B1 249 aa13.36□□□□□ -0.27
PAF1-202ENST00000416728 TMEM251Q8N6I4 163 aa13.36□□□□□ -0.27
PAF1-202ENST00000416728 C7orf57Q8NEG2 295 aa13.36□□□□□ -0.27
PAF1-202ENST00000416728 OR5M9Q8NGP3 310 aa13.36□□□□□ -0.27
PAF1-202ENST00000416728 STAG3L4Q8TBR4 150 aa13.36□□□□□ -0.27
PAF1-202ENST00000416728 DPH5Q9H2P9 285 aa13.36□□□□□ -0.27
PAF1-202ENST00000416728 ALG9Q9H6U8 611 aa13.36□□□□□ -0.27
PAF1-202ENST00000416728 IL1RL2Q9HB29 575 aa13.36□□□□□ -0.27
PAF1-202ENST00000416728 PNPLA3Q9NST1 481 aa13.36□□□□□ -0.27
PAF1-202ENST00000416728 SACM1LQ9NTJ5 587 aa13.36□□□□□ -0.27
PAF1-202ENST00000416728 LIPGQ9Y5X9 500 aa13.36□□□□□ -0.27
PAF1-202ENST00000416728 POLQO75417 2590 aa13.36□□□□□ -0.27
PAF1-202ENST00000416728 ADGRG4Q8IZF6 3080 aa13.36□□□□□ -0.27
PAF1-202ENST00000416728 FAM159BA6NKW6 160 aa13.35□□□□□ -0.27
PAF1-202ENST00000416728 DYRK3O43781 588 aa13.35□□□□□ -0.27
PAF1-202ENST00000416728 SH3BGRLO75368 114 aa13.35□□□□□ -0.27
PAF1-202ENST00000416728 SCELO95171 688 aa13.35□□□□□ -0.27
PAF1-202ENST00000416728 ETHE1O95571 254 aa13.35□□□□□ -0.27
PAF1-202ENST00000416728 TGFB1P01137 390 aa13.35□□□□□ -0.27
PAF1-202ENST00000416728 IGHG3P01860 377 aa13.35□□□□□ -0.27
PAF1-202ENST00000416728 ACVR2AP27037 513 aa13.35□□□□□ -0.27
PAF1-202ENST00000416728 MSX1P28360 303 aa13.35□□□□□ -0.27
PAF1-202ENST00000416728 SPRP35270 261 aaPredicted RBP13.35□□□□□ -0.27
PAF1-202ENST00000416728 MAGEA5P43359 124 aa13.35□□□□□ -0.27
PAF1-202ENST00000416728 DNASE1L1P49184 302 aa13.35□□□□□ -0.27
PAF1-202ENST00000416728 E2F2Q14209 437 aa13.35□□□□□ -0.27
PAF1-202ENST00000416728 ZNF585AQ6P3V2 769 aa13.35□□□□□ -0.27
PAF1-202ENST00000416728 C3orf62Q6ZUJ4 267 aa13.35□□□□□ -0.27
PAF1-202ENST00000416728 RAPH1Q70E73 1250 aa13.35□□□□□ -0.27
PAF1-202ENST00000416728 CYS1Q717R9 158 aa13.35□□□□□ -0.27
PAF1-202ENST00000416728 LAS2Q8IYD9 372 aa13.35□□□□□ -0.27
PAF1-202ENST00000416728 OR10Q1Q8NGQ4 319 aa13.35□□□□□ -0.27
PAF1-202ENST00000416728 ZNF721Q8TF20 911 aa13.35□□□□□ -0.27
PAF1-202ENST00000416728 ANKRD9Q96BM1 317 aaPredicted RBP13.35□□□□□ -0.27
PAF1-202ENST00000416728 CMTM7Q96FZ5 175 aa13.35□□□□□ -0.27
PAF1-202ENST00000416728 DGAT2Q96PD7 388 aa13.35□□□□□ -0.27
PAF1-202ENST00000416728 ERP44Q9BS26 406 aa13.35□□□□□ -0.27
PAF1-202ENST00000416728 NUDT4Q9NZJ9 180 aa13.35□□□□□ -0.27
PAF1-202ENST00000416728 WHRNQ9P202 907 aa13.35□□□□□ -0.27
PAF1-202ENST00000416728 OPTCQ9UBM4 332 aa13.35□□□□□ -0.27
PAF1-202ENST00000416728 ATP6AP2A0A1C7CYW4 349 aa13.34□□□□□ -0.27
PAF1-202ENST00000416728 FAM187AA6NFU0 413 aa13.34□□□□□ -0.27
PAF1-202ENST00000416728 SUPT3HB4E1H0 165 aa13.34□□□□□ -0.27
PAF1-202ENST00000416728 K7EPI3 171 aa13.34□□□□□ -0.27
PAF1-202ENST00000416728 SAP18O00422 153 aaKnown RBP13.34□□□□□ -0.27
PAF1-202ENST00000416728 FGF17O60258 216 aa13.34□□□□□ -0.27
PAF1-202ENST00000416728 ZNF354AO60765 605 aaPredicted RBP13.34□□□□□ -0.27
PAF1-202ENST00000416728 SUPT3HO75486 399 aa13.34□□□□□ -0.27
PAF1-202ENST00000416728 ATP6AP2O75787 350 aa13.34□□□□□ -0.27
PAF1-202ENST00000416728 CCL3P10147 92 aa13.34□□□□□ -0.27
PAF1-202ENST00000416728 STT3AP46977 705 aa13.34□□□□□ -0.27
PAF1-202ENST00000416728 ASPHQ12797 758 aa13.34□□□□□ -0.27
PAF1-202ENST00000416728 SLMAPQ14BN4 828 aa13.34□□□□□ -0.27
PAF1-202ENST00000416728 TESK1Q15569 626 aa13.34□□□□□ -0.27
PAF1-202ENST00000416728 MPEG1Q2M385 716 aa13.34□□□□□ -0.27
PAF1-202ENST00000416728 GRTP1Q5TC63 336 aa13.34□□□□□ -0.27
PAF1-202ENST00000416728 KHDRBS2Q5VWX1 349 aaKnown RBP13.34□□□□□ -0.27
PAF1-202ENST00000416728 B3GNT6Q6ZMB0 384 aa13.34□□□□□ -0.27
PAF1-202ENST00000416728 TRILQ7L0X0 811 aa13.34□□□□□ -0.27
PAF1-202ENST00000416728 TBC1D1Q86TI0 1168 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms