RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 DMRT3Q9NQL9 472 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 TMEM181Q9P2C4 612 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 TRAF6Q9Y4K3 522 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 NEUROG3Q9Y4Z2 214 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 MANBAO00462 879 aa13.77□□□□□ -0.21
SGCE-202ENST00000415788 TNFSF15O95150 251 aa13.77□□□□□ -0.21
SGCE-202ENST00000415788 SERPIND1P05546 499 aa13.77□□□□□ -0.21
SGCE-202ENST00000415788 HBQ1P09105 142 aa13.77□□□□□ -0.21
SGCE-202ENST00000415788 HSD3B1P14060 373 aa13.77□□□□□ -0.21
SGCE-202ENST00000415788 HSD3B2P26439 372 aa13.77□□□□□ -0.21
SGCE-202ENST00000415788 RBMS1P29558 406 aaKnown RBP13.77□□□□□ -0.21
SGCE-202ENST00000415788 ETV5P41161 510 aa13.77□□□□□ -0.21
SGCE-202ENST00000415788 FOXA1P55317 472 aa13.77□□□□□ -0.21
SGCE-202ENST00000415788 RTP5Q14D33 572 aa13.77□□□□□ -0.21
SGCE-202ENST00000415788 TMEM35AQ53FP2 167 aa13.77□□□□□ -0.21
SGCE-202ENST00000415788 KANK2Q63ZY3 851 aa13.77□□□□□ -0.21
SGCE-202ENST00000415788 HMBOX1Q6NT76 420 aa13.77□□□□□ -0.21
SGCE-202ENST00000415788 TTC33Q6PID6 262 aaPredicted RBP13.77□□□□□ -0.21
SGCE-202ENST00000415788 GK5Q6ZS86 529 aa13.77□□□□□ -0.21
SGCE-202ENST00000415788 VN1R5Q7Z5H4 357 aa13.77□□□□□ -0.21
SGCE-202ENST00000415788 DHFR2Q86XF0 187 aa13.77□□□□□ -0.21
SGCE-202ENST00000415788 FAM47BQ8NA70 645 aa13.77□□□□□ -0.21
SGCE-202ENST00000415788 FAM156AQ8NDB6 213 aa13.77□□□□□ -0.21
SGCE-202ENST00000415788 USP7Q93009 1102 aa13.77□□□□□ -0.21
SGCE-202ENST00000415788 ITPKCQ96DU7 683 aa13.77□□□□□ -0.21
SGCE-202ENST00000415788 NDC1Q9BTX1 674 aa13.77□□□□□ -0.21
SGCE-202ENST00000415788 YTHDF1Q9BYJ9 559 aaKnown RBP13.77□□□□□ -0.21
SGCE-202ENST00000415788 SLC7A5P2Q9GIP4 190 aa13.77□□□□□ -0.21
SGCE-202ENST00000415788 SLC6A16Q9GZN6 736 aa13.77□□□□□ -0.21
SGCE-202ENST00000415788 SPRTNQ9H040 489 aaPredicted RBP13.77□□□□□ -0.21
SGCE-202ENST00000415788 APMAPQ9HDC9 416 aa13.77□□□□□ -0.21
SGCE-202ENST00000415788 PFDN4Q9NQP4 134 aa13.77□□□□□ -0.21
SGCE-202ENST00000415788 CROTQ9UKG9 612 aa13.77□□□□□ -0.21
SGCE-202ENST00000415788 WASF3Q9UPY6 502 aa13.77□□□□□ -0.21
SGCE-202ENST00000415788 RUVBL1Q9Y265 456 aaKnown RBP13.77□□□□□ -0.21
SGCE-202ENST00000415788 TIMM22Q9Y584 194 aa13.77□□□□□ -0.21
SGCE-202ENST00000415788 SNRNP200O75643 2136 aaKnown RBP13.77□□□□□ -0.21
SGCE-202ENST00000415788 SERTM1A2A2V5 107 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 HYKKA2RU49 373 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 PSMD12O00232 456 aaPredicted RBP13.76□□□□□ -0.21
SGCE-202ENST00000415788 AKAP10O43572 662 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 SCRG1O75711 98 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 DXOO77932 396 aaKnown RBP13.76□□□□□ -0.21
SGCE-202ENST00000415788 SNRPB2P08579 225 aaKnown RBP13.76□□□□□ -0.21
SGCE-202ENST00000415788 ADRB1P08588 477 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 PTX3P26022 381 aaPredicted RBP13.76□□□□□ -0.21
SGCE-202ENST00000415788 DCKP27707 260 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 ATP4BP51164 291 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 PSMD7P51665 324 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 CSTF3Q12996 717 aaKnown RBP13.76□□□□□ -0.21
SGCE-202ENST00000415788 CAMK2BQ13554 666 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 DDX39BQ13838 428 aaKnown RBP13.76□□□□□ -0.21
SGCE-202ENST00000415788 PWWP2BQ6NUJ5 590 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 TMEM214Q6NUQ4 689 aaKnown RBP13.76□□□□□ -0.21
SGCE-202ENST00000415788 NIPAL1Q6NVV3 410 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 C8orf82Q6P1X6 216 aaPredicted RBP13.76□□□□□ -0.21
SGCE-202ENST00000415788 MARCH9Q86YJ5 346 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 SRFBP1Q8NEF9 429 aaKnown RBP13.76□□□□□ -0.21
SGCE-202ENST00000415788 ROPN1LQ96C74 230 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 NXPE2Q96DL1 559 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 SLC46A1Q96NT5 459 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 PHF12Q96QT6 1004 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 KCNA7Q96RP8 456 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 MTERF1Q99551 399 aaKnown RBP13.76□□□□□ -0.21
SGCE-202ENST00000415788 CIB1Q99828 191 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 CTRCQ99895 268 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 SCNM1Q9BWG6 230 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 PCDHAC1Q9H158 963 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 TNFRSF12AQ9NP84 129 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 B3GALT1Q9Y5Z6 326 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 SLC22A7Q9Y694 548 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 LRIT2A6NDA9 550 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 TRIM64BA6NI03 449 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 AQP12BA6NM10 295 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 MAGEB17A8MXT2 336 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 P2RX6O15547 441 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 ZNF749O43361 778 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 CPNE3O75131 537 aaKnown RBP13.76□□□□□ -0.21
SGCE-202ENST00000415788 GCGRP47871 477 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 ARFIP1P53367 373 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 SKP1P63208 163 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 TGM3Q08188 693 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 FAM53BQ14153 422 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 HKDC1Q2TB90 917 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 ADPRMQ3LIE5 342 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 CLEC6AQ6EIG7 209 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 ADNP2Q6IQ32 1131 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 PRMT9Q6P2P2 845 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 ABHD13Q7L211 337 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 AQP12AQ8IXF9 295 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 PPWD1Q96BP3 646 aaKnown RBP13.76□□□□□ -0.21
SGCE-202ENST00000415788 MVB12AQ96EY5 273 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 MARK4Q96L34 752 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 LRFN5Q96NI6 719 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 TUBA1CQ9BQE3 449 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 C9orf16Q9BUW7 83 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 MS4A8Q9BY19 250 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 REXO4Q9GZR2 422 aaKnown RBP13.76□□□□□ -0.21
SGCE-202ENST00000415788 MEAF6Q9HAF1 191 aa13.76□□□□□ -0.21
SGCE-202ENST00000415788 CUTCQ9NTM9 273 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms