RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 SERINC2Q96SA4 455 aa19.52■□□□□ 0.71
AP1S3-205ENST00000415298 TCEAL7Q9BRU2 100 aa19.52■□□□□ 0.71
AP1S3-205ENST00000415298 KLF16Q9BXK1 252 aaPredicted RBP19.52■□□□□ 0.71
AP1S3-205ENST00000415298 SFXN1Q9H9B4 322 aa19.52■□□□□ 0.71
AP1S3-205ENST00000415298 SMURF1Q9HCE7 757 aa19.52■□□□□ 0.71
AP1S3-205ENST00000415298 OR12D3Q9UGF7 316 aa19.52■□□□□ 0.71
AP1S3-205ENST00000415298 CCL26Q9Y258 94 aa19.52■□□□□ 0.71
AP1S3-205ENST00000415298 LOC100506127A0A0U1RQW1 187 aa19.51■□□□□ 0.71
AP1S3-205ENST00000415298 PDCD5O14737 125 aa19.51■□□□□ 0.71
AP1S3-205ENST00000415298 HCN1O60741 890 aa19.51■□□□□ 0.71
AP1S3-205ENST00000415298 TPH1P17752 444 aa19.51■□□□□ 0.71
AP1S3-205ENST00000415298 ZNF81P51508 661 aa19.51■□□□□ 0.71
AP1S3-205ENST00000415298 ARL13AQ5H913 290 aaPredicted RBP19.51■□□□□ 0.71
AP1S3-205ENST00000415298 RBMS3Q6XE24 437 aaKnown RBP19.51■□□□□ 0.71
AP1S3-205ENST00000415298 TMEM184AQ6ZMB5 413 aa19.51■□□□□ 0.71
AP1S3-205ENST00000415298 PGBD3Q8N328 593 aa19.51■□□□□ 0.71
AP1S3-205ENST00000415298 CDYL2Q8N8U2 506 aa19.51■□□□□ 0.71
AP1S3-205ENST00000415298 WDSUB1Q8N9V3 476 aa19.51■□□□□ 0.71
AP1S3-205ENST00000415298 NTAN1Q96AB6 310 aa19.51■□□□□ 0.71
AP1S3-205ENST00000415298 ZC3HAV1LQ96H79 300 aaKnown RBP19.51■□□□□ 0.71
AP1S3-205ENST00000415298 TRMOQ9BU70 441 aa19.51■□□□□ 0.71
AP1S3-205ENST00000415298 ZNF358Q9NW07 568 aa19.51■□□□□ 0.71
AP1S3-205ENST00000415298 CLDND1Q9NY35 253 aa19.51■□□□□ 0.71
AP1S3-205ENST00000415298 AASSQ9UDR5 926 aa19.51■□□□□ 0.71
AP1S3-205ENST00000415298 SLC6A5Q9Y345 797 aa19.51■□□□□ 0.71
AP1S3-205ENST00000415298 H3BM21 787 aa19.51■□□□□ 0.71
AP1S3-205ENST00000415298 AIPO00170 330 aa19.51■□□□□ 0.71
AP1S3-205ENST00000415298 STC2O76061 302 aa19.51■□□□□ 0.71
AP1S3-205ENST00000415298 IGLV3-27P01718 113 aa19.51■□□□□ 0.71
AP1S3-205ENST00000415298 CEBPBP17676 345 aa19.51■□□□□ 0.71
AP1S3-205ENST00000415298 FMO3P31513 532 aa19.51■□□□□ 0.71
AP1S3-205ENST00000415298 DSC2Q02487 901 aa19.51■□□□□ 0.71
AP1S3-205ENST00000415298 SNTB1Q13884 538 aaKnown RBP19.51■□□□□ 0.71
AP1S3-205ENST00000415298 FAF2Q96CS3 445 aa19.51■□□□□ 0.71
AP1S3-205ENST00000415298 MYEOVQ96EZ4 313 aa19.51■□□□□ 0.71
AP1S3-205ENST00000415298 POLR1EQ9GZS1 481 aaKnown RBP19.51■□□□□ 0.71
AP1S3-205ENST00000415298 SSR3Q9UNL2 185 aa19.51■□□□□ 0.71
AP1S3-205ENST00000415298 RUVBL2Q9Y230 463 aaKnown RBP19.51■□□□□ 0.71
AP1S3-205ENST00000415298 HS3ST4Q9Y661 456 aa19.51■□□□□ 0.71
AP1S3-205ENST00000415298 OR6C74A6NCV1 312 aa19.5■□□□□ 0.71
AP1S3-205ENST00000415298 GP1BAP07359 652 aa19.5■□□□□ 0.71
AP1S3-205ENST00000415298 GNSP15586 552 aa19.5■□□□□ 0.71
AP1S3-205ENST00000415298 LTBRP36941 435 aa19.5■□□□□ 0.71
AP1S3-205ENST00000415298 FRG1Q14331 258 aaKnown RBP19.5■□□□□ 0.71
AP1S3-205ENST00000415298 C9orf152Q5JTZ5 239 aa19.5■□□□□ 0.71
AP1S3-205ENST00000415298 NUDT18Q6ZVK8 323 aa19.5■□□□□ 0.71
AP1S3-205ENST00000415298 DENND1CQ8IV53 801 aa19.5■□□□□ 0.71
AP1S3-205ENST00000415298 ZNF540Q8NDQ6 660 aa19.5■□□□□ 0.71
AP1S3-205ENST00000415298 PCDH19Q8TAB3 1148 aa19.5■□□□□ 0.71
AP1S3-205ENST00000415298 SEPHS2Q99611 448 aa19.5■□□□□ 0.71
AP1S3-205ENST00000415298 GSDMCQ9BYG8 508 aa19.5■□□□□ 0.71
AP1S3-205ENST00000415298 NCOR1P1Q9H4R4 102 aa19.5■□□□□ 0.71
AP1S3-205ENST00000415298 SMURF2Q9HAU4 748 aa19.5■□□□□ 0.71
AP1S3-205ENST00000415298 SEBOXQ9HB31 216 aaPredicted RBP19.5■□□□□ 0.71
AP1S3-205ENST00000415298 GALNT9Q9HCQ5 603 aa19.5■□□□□ 0.71
AP1S3-205ENST00000415298 MRPS23Q9Y3D9 190 aaKnown RBP19.5■□□□□ 0.71
AP1S3-205ENST00000415298 G3V2T6 193 aa19.5■□□□□ 0.71
AP1S3-205ENST00000415298 SDHDO14521 159 aa19.5■□□□□ 0.71
AP1S3-205ENST00000415298 SLC43A1O75387 559 aa19.5■□□□□ 0.71
AP1S3-205ENST00000415298 SCAPQ12770 1279 aa19.5■□□□□ 0.71
AP1S3-205ENST00000415298 TIGD6Q17RP2 521 aa19.5■□□□□ 0.71
AP1S3-205ENST00000415298 MPEG1Q2M385 716 aa19.5■□□□□ 0.71
AP1S3-205ENST00000415298 MAJINQ3KP22 176 aa19.5■□□□□ 0.71
AP1S3-205ENST00000415298 NHLRC3Q5JS37 347 aa19.5■□□□□ 0.71
AP1S3-205ENST00000415298 ARTNQ5T4W7 220 aa19.5■□□□□ 0.71
AP1S3-205ENST00000415298 ABI3BPQ7Z7G0 1075 aa19.5■□□□□ 0.71
AP1S3-205ENST00000415298 CAMKVQ8NCB2 501 aa19.5■□□□□ 0.71
AP1S3-205ENST00000415298 RNASE11Q8TAA1 199 aaKnown RBP19.5■□□□□ 0.71
AP1S3-205ENST00000415298 LRRC46Q96FV0 321 aa19.5■□□□□ 0.71
AP1S3-205ENST00000415298 NKX6-2Q9C056 277 aaPredicted RBP19.5■□□□□ 0.71
AP1S3-205ENST00000415298 PLA2G10O15496 165 aa19.49■□□□□ 0.71
AP1S3-205ENST00000415298 ORC5O43913 435 aa19.49■□□□□ 0.71
AP1S3-205ENST00000415298 VPS26AO75436 327 aa19.49■□□□□ 0.71
AP1S3-205ENST00000415298 LGALSLQ3ZCW2 172 aaPredicted RBP19.49■□□□□ 0.71
AP1S3-205ENST00000415298 RNF212Q495C1 297 aa19.49■□□□□ 0.71
AP1S3-205ENST00000415298 LRRC66Q68CR7 880 aa19.49■□□□□ 0.71
AP1S3-205ENST00000415298 SHFQ7M4L6 423 aa19.49■□□□□ 0.71
AP1S3-205ENST00000415298 SLC46A3Q7Z3Q1 461 aa19.49■□□□□ 0.71
AP1S3-205ENST00000415298 HSD17B13Q7Z5P4 300 aaPredicted RBP19.49■□□□□ 0.71
AP1S3-205ENST00000415298 DPPA2Q7Z7J5 298 aa19.49■□□□□ 0.71
AP1S3-205ENST00000415298 RIMKLAQ8IXN7 391 aa19.49■□□□□ 0.71
AP1S3-205ENST00000415298 DUSP18Q8NEJ0 188 aa19.49■□□□□ 0.71
AP1S3-205ENST00000415298 DMBX1Q8NFW5 382 aa19.49■□□□□ 0.71
AP1S3-205ENST00000415298 OR11H4Q8NGC9 324 aa19.49■□□□□ 0.71
AP1S3-205ENST00000415298 OR2T4Q8NH00 348 aa19.49■□□□□ 0.71
AP1S3-205ENST00000415298 CA5BP1Q8WTZ4 195 aa19.49■□□□□ 0.71
AP1S3-205ENST00000415298 GLYATL2Q8WU03 294 aa19.49■□□□□ 0.71
AP1S3-205ENST00000415298 CMSS1Q9BQ75 279 aaKnown RBP19.49■□□□□ 0.71
AP1S3-205ENST00000415298 RBCK1Q9BYM8 510 aa19.49■□□□□ 0.71
AP1S3-205ENST00000415298 RNF167Q9H6Y7 350 aa19.49■□□□□ 0.71
AP1S3-205ENST00000415298 SLC16A6O15403 523 aa19.49■□□□□ 0.71
AP1S3-205ENST00000415298 ULK1O75385 1050 aa19.49■□□□□ 0.71
AP1S3-205ENST00000415298 CREG1O75629 220 aa19.49■□□□□ 0.71
AP1S3-205ENST00000415298 GPX5O75715 221 aa19.49■□□□□ 0.71
AP1S3-205ENST00000415298 CSF3P09919 207 aa19.49■□□□□ 0.71
AP1S3-205ENST00000415298 TSPAN8P19075 237 aa19.49■□□□□ 0.71
AP1S3-205ENST00000415298 CLDN20P56880 219 aa19.49■□□□□ 0.71
AP1S3-205ENST00000415298 CCDC85BQ15834 202 aaPredicted RBP19.49■□□□□ 0.71
AP1S3-205ENST00000415298 MS4A13Q5J8X5 152 aa19.49■□□□□ 0.71
AP1S3-205ENST00000415298 NADSYN1Q6IA69 706 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms