RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 PHYKPLQ8IUZ5 450 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 RASGRP3Q8IV61 690 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 ADHFE1Q8IWW8 467 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 GSPT2Q8IYD1 628 aaKnown RBP3.45□□□□□ -1.86
SF3B1-203ENST00000414174 FAM71AQ8IYT1 594 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 UBQLNLQ8IYU4 475 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 RNF113BQ8IZP6 322 aaKnown RBP3.45□□□□□ -1.86
SF3B1-203ENST00000414174 CLEC1AQ8NC01 280 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 CATSPER1Q8NEC5 780 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 BEST2Q8NFU1 509 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 CASKIN2Q8WXE0 1202 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 SMPDL3AQ92484 453 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 PIGBQ92521 554 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 AP3S1Q92572 193 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 GTF2H4Q92759 462 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 CAVIN3Q969G5 261 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 ABTB1Q969K4 478 aaPredicted RBP3.45□□□□□ -1.86
SF3B1-203ENST00000414174 FBXW5Q969U6 566 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 S100PBPQ96BU1 408 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 TAMM41Q96BW9 452 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 ULK4Q96C45 1275 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 NXPE2Q96DL1 559 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 MRPL48Q96GC5 212 aaKnown RBP3.45□□□□□ -1.86
SF3B1-203ENST00000414174 SMIM10Q96HG1 83 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 TMX3Q96JJ7 454 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 LMLNQ96KR4 655 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 C10orf90Q96M02 699 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 MBOAT7Q96N66 472 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 NPAS1Q99742 590 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 RTP3Q9BQQ7 232 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 ZNF251Q9BRH9 671 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 SLC30A2Q9BRI3 323 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 SRSF8Q9BRL6 282 aaKnown RBP3.45□□□□□ -1.86
SF3B1-203ENST00000414174 C2orf88Q9BSF0 95 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 ZNF2Q9BSG1 426 aaPredicted RBP3.45□□□□□ -1.86
SF3B1-203ENST00000414174 COPS4Q9BT78 406 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 MED10Q9BTT4 135 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 CHRDL1Q9BU40 450 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 TMED9Q9BVK6 235 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 ENKD1Q9H0I2 346 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 CHST8Q9H2A9 424 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 SPNS1Q9H2V7 528 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 PCIF1Q9H4Z3 704 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 NOL11Q9H8H0 719 aaKnown RBP3.45□□□□□ -1.86
SF3B1-203ENST00000414174 CNOT10Q9H9A5 744 aaKnown RBP3.45□□□□□ -1.86
SF3B1-203ENST00000414174 MEAF6Q9HAF1 191 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 USP29Q9HBJ7 922 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 RAVER2Q9HCJ3 691 aaKnown RBP3.45□□□□□ -1.86
SF3B1-203ENST00000414174 VAT1LQ9HCJ6 419 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 CHMP1AQ9HD42 196 aaPredicted RBP3.45□□□□□ -1.86
SF3B1-203ENST00000414174 KCNMB3Q9NPA1 279 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 ZC4H2Q9NQZ6 224 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 RGS18Q9NS28 235 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 ABCC13Q9NSE7 274 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 FAM207AQ9NSI2 230 aaPredicted RBP3.45□□□□□ -1.86
SF3B1-203ENST00000414174 OLAHQ9NV23 265 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 COA4Q9NYJ1 87 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 TAS2R9Q9NYW1 312 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 CNOT2Q9NZN8 540 aaKnown RBP3.45□□□□□ -1.86
SF3B1-203ENST00000414174 MYOTQ9UBF9 498 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.45□□□□□ -1.86
SF3B1-203ENST00000414174 ERRFI1Q9UJM3 462 aaPredicted RBP3.45□□□□□ -1.86
SF3B1-203ENST00000414174 ACSL5Q9ULC5 683 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 CBLCQ9ULV8 474 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 RASD1Q9Y272 281 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 NDUFAF1Q9Y375 327 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 MMACHCQ9Y4U1 282 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 WIF1Q9Y5W5 379 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 NID2Q14112 1375 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 KIAA0232Q92628 1395 aa3.45□□□□□ -1.86
SF3B1-203ENST00000414174 CLUHO75153 1309 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 SF3B1O75533 1304 aaKnown RBP eCLIP3.44□□□□□ -1.866e-7■■■■■ 40.6
SF3B1-203ENST00000414174 MIA2Q96PC5 1412 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 NEURL4Q96JN8 1562 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 SH3PXD2BA1X283 911 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 TMEM213A2RRL7 107 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 FAM172BPA6NC97 362 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 MBD3L4A6NDZ8 208 aaPredicted RBP3.44□□□□□ -1.86
SF3B1-203ENST00000414174 MBD3L3A6NE82 208 aaPredicted RBP3.44□□□□□ -1.86
SF3B1-203ENST00000414174 C5orf60A6NFR6 353 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 MROH6A6NGR9 719 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 FBLL1A6NHQ2 334 aaKnown RBP3.44□□□□□ -1.86
SF3B1-203ENST00000414174 FAM90A7PA6NKC0 464 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 FAM90A22PA8MWA6 464 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 FAM90A12PA8MX19 464 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 FAM90A23PA8MXZ1 464 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 MKRN2OSH3BPM6 223 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 TMEM189-UBE2V1I3L0A0 370 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 SGK494L7N484 410 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 WWP2O00308 870 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 FOXE1O00358 373 aaPredicted RBP3.44□□□□□ -1.86
SF3B1-203ENST00000414174 SURF4O15260 269 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 EMC8O43402 210 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 DUX1O43812 170 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 SSX4O60224 188 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 HS6ST1O60243 411 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 PAGE4O60829 102 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 AVILO75366 819 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 UPK3AO75631 287 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 WDR47O94967 919 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms