RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	TGDS	O95455	350 aa		12.37	□□□□□ -0.43
SF1-206	ENST00000413725	VIM	P08670	466 aa	Known RBP	12.37	□□□□□ -0.43
SF1-206	ENST00000413725	PRKAR1A	P10644	381 aa		12.37	□□□□□ -0.43
SF1-206	ENST00000413725	LBP	P18428	481 aa		12.37	□□□□□ -0.43
SF1-206	ENST00000413725	TAS2R50	P59544	299 aa		12.37	□□□□□ -0.43
SF1-206	ENST00000413725	ERVK-8	P63133	956 aa		12.37	□□□□□ -0.43
SF1-206	ENST00000413725	BTG2	P78543	158 aa		12.37	□□□□□ -0.43
SF1-206	ENST00000413725	VAC14	Q08AM6	782 aa		12.37	□□□□□ -0.43
SF1-206	ENST00000413725	CDC20	Q12834	499 aa		12.37	□□□□□ -0.43
SF1-206	ENST00000413725	HEPACAM	Q14CZ8	416 aa		12.37	□□□□□ -0.43
SF1-206	ENST00000413725	NSDHL	Q15738	373 aa		12.37	□□□□□ -0.43
SF1-206	ENST00000413725	NDUFAF5	Q5TEU4	345 aa		12.37	□□□□□ -0.43
SF1-206	ENST00000413725	FAAH2	Q6GMR7	532 aa		12.37	□□□□□ -0.43
SF1-206	ENST00000413725	IKBIP	Q70UQ0	350 aa		12.37	□□□□□ -0.43
SF1-206	ENST00000413725	PARP9	Q8IXQ6	854 aa		12.37	□□□□□ -0.43
SF1-206	ENST00000413725	TMEM132C	Q8N3T6	1108 aa		12.37	□□□□□ -0.43
SF1-206	ENST00000413725	CDC26	Q8NHZ8	85 aa		12.37	□□□□□ -0.43
SF1-206	ENST00000413725	ADAMTS17	Q8TE56	1095 aa		12.37	□□□□□ -0.43
SF1-206	ENST00000413725	C16orf78	Q8WTQ4	265 aa		12.37	□□□□□ -0.43
SF1-206	ENST00000413725	THAP4	Q8WY91	577 aa		12.37	□□□□□ -0.43
SF1-206	ENST00000413725	TM4SF18	Q96CE8	201 aa		12.37	□□□□□ -0.43
SF1-206	ENST00000413725	AKTIP	Q9H8T0	292 aa		12.37	□□□□□ -0.43
SF1-206	ENST00000413725	MYNN	Q9NPC7	610 aa		12.37	□□□□□ -0.43
SF1-206	ENST00000413725	TEX10	Q9NXF1	929 aa	Predicted RBP	12.37	□□□□□ -0.43
SF1-206	ENST00000413725	NOP53	Q9NZM5	478 aa	Known RBP	12.37	□□□□□ -0.43
SF1-206	ENST00000413725	GIMAP2	Q9UG22	337 aa		12.37	□□□□□ -0.43
SF1-206	ENST00000413725	EIF3L	Q9Y262	564 aa	Known RBP	12.37	□□□□□ -0.43
SF1-206	ENST00000413725	DLGAP4	Q9Y2H0	992 aa		12.37	□□□□□ -0.43
SF1-206	ENST00000413725	PCDHA9	Q9Y5H5	950 aa		12.37	□□□□□ -0.43
SF1-206	ENST00000413725	HS3ST3B1	Q9Y662	390 aa		12.37	□□□□□ -0.43
SF1-206	ENST00000413725	SRRM3	A6NNA2	597 aa	Predicted RBP	12.36	□□□□□ -0.43
SF1-206	ENST00000413725		K7ENP7	123 aa		12.36	□□□□□ -0.43
SF1-206	ENST00000413725	DIAPH2	O60879	1101 aa		12.36	□□□□□ -0.43
SF1-206	ENST00000413725	IL3	P08700	152 aa		12.36	□□□□□ -0.43
SF1-206	ENST00000413725	PRR35	P0CG20	571 aa		12.36	□□□□□ -0.43
SF1-206	ENST00000413725	PRPS2	P11908	318 aa		12.36	□□□□□ -0.43
SF1-206	ENST00000413725	DRD2	P14416	443 aa		12.36	□□□□□ -0.43
SF1-206	ENST00000413725	ALOX15	P16050	662 aa	Predicted RBP	12.36	□□□□□ -0.43
SF1-206	ENST00000413725	MAOA	P21397	527 aa		12.36	□□□□□ -0.43
SF1-206	ENST00000413725	ASMT	P46597	345 aa		12.36	□□□□□ -0.43
SF1-206	ENST00000413725	ALDH9A1	P49189	494 aa		12.36	□□□□□ -0.43
SF1-206	ENST00000413725	HNRNPF	P52597	415 aa	Known RBP	12.36	□□□□□ -0.43
SF1-206	ENST00000413725	EMX2	Q04743	252 aa		12.36	□□□□□ -0.43
SF1-206	ENST00000413725	STX4	Q12846	297 aa		12.36	□□□□□ -0.43
SF1-206	ENST00000413725	SERTAD2	Q14140	314 aa		12.36	□□□□□ -0.43
SF1-206	ENST00000413725	VWA5B1	Q5TIE3	1220 aa		12.36	□□□□□ -0.43
SF1-206	ENST00000413725	INO80C	Q6PI98	192 aa	Predicted RBP	12.36	□□□□□ -0.43
SF1-206	ENST00000413725	TMEM205	Q6UW68	189 aa		12.36	□□□□□ -0.43
SF1-206	ENST00000413725	ACAD11	Q709F0	780 aa		12.36	□□□□□ -0.43
SF1-206	ENST00000413725	PPP1R32	Q7Z5V6	425 aa		12.36	□□□□□ -0.43
SF1-206	ENST00000413725	CLNK	Q7Z7G1	428 aa		12.36	□□□□□ -0.43
SF1-206	ENST00000413725	MRGPRE	Q86SM8	312 aa		12.36	□□□□□ -0.43
SF1-206	ENST00000413725	TMEM151B	Q8IW70	566 aa		12.36	□□□□□ -0.43
SF1-206	ENST00000413725	SCUBE1	Q8IWY4	988 aa		12.36	□□□□□ -0.43
SF1-206	ENST00000413725	TMEM52	Q8NDY8	209 aa		12.36	□□□□□ -0.43
SF1-206	ENST00000413725	TSLP	Q969D9	159 aa		12.36	□□□□□ -0.43
SF1-206	ENST00000413725	CATSPER2	Q96P56	530 aa		12.36	□□□□□ -0.43
SF1-206	ENST00000413725	SIKE1	Q9BRV8	207 aa		12.36	□□□□□ -0.43
SF1-206	ENST00000413725	C1orf50	Q9BV19	199 aa		12.36	□□□□□ -0.43
SF1-206	ENST00000413725	TRIM55	Q9BYV6	548 aa		12.36	□□□□□ -0.43
SF1-206	ENST00000413725	CPNE5	Q9HCH3	593 aa		12.36	□□□□□ -0.43
SF1-206	ENST00000413725	PSME2	Q9UL46	239 aa		12.36	□□□□□ -0.43
SF1-206	ENST00000413725	POLH	Q9Y253	713 aa		12.36	□□□□□ -0.43
SF1-206	ENST00000413725	CACNA1G	O43497	2377 aa		12.36	□□□□□ -0.43
SF1-206	ENST00000413725	PKD1L2	Q7Z442	2459 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	CFAP47	Q6ZTR5	3102 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	LOC102723996	A0A087X1L8	192 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	IGKV3D-11	A0A0A0MRZ8	115 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	GOLGA8Q	A0A0J9YX86	632 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	TCRBV16S1A1N1	A0A5B0	115 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	GOLGA8O	A6NCC3	632 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	OR2W5	A6NFC9	320 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	GLOD5	A6NK44	160 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	GOLGA8N	F8WBI6	632 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	POLR3G	O15318	223 aa	Predicted RBP	12.35	□□□□□ -0.43
SF1-206	ENST00000413725	LDB3	O75112	727 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	PRKRA	O75569	313 aa	Known RBP	12.35	□□□□□ -0.43
SF1-206	ENST00000413725	TROVE2	P10155	538 aa	Known RBP eCLIP	12.35	□□□□□ -0.43
SF1-206	ENST00000413725	BCKDHA	P12694	445 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	DDX5	P17844	614 aa	Known RBP	12.35	□□□□□ -0.43
SF1-206	ENST00000413725	SDC1	P18827	310 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	PIK3R1	P27986	724 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	EPHA3	P29320	983 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	FOLH1	Q04609	750 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	EEF1A2	Q05639	463 aa	Known RBP	12.35	□□□□□ -0.43
SF1-206	ENST00000413725	ACTN3	Q08043	901 aa	Predicted RBP	12.35	□□□□□ -0.43
SF1-206	ENST00000413725	C2orf80	Q0P641	193 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	BIK	Q13323	160 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	ST3GAL2	Q16842	350 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	ATP1A1-AS1	Q5TC04	95 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	IL23R	Q5VWK5	629 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	NXN	Q6DKJ4	435 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	OGFOD2	Q6N063	350 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	EPGN	Q6UW88	154 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	LANCL3	Q6ZV70	420 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	LARP4	Q71RC2	724 aa	Known RBP eCLIP	12.35	□□□□□ -0.43
SF1-206	ENST00000413725	MAVS	Q7Z434	540 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	CPEB2	Q7Z5Q1	589 aa	Known RBP	12.35	□□□□□ -0.43
SF1-206	ENST00000413725	ANKRD37	Q7Z713	158 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	FAM9C	Q8IZT9	166 aa		12.35	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms