RNA–Protein interactions for RNA: ENST00000413636.6

CIRBP-202, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-202ENST00000413636 PMEPA1Q969W9 287 aa17.6■□□□□ 0.41
CIRBP-202ENST00000413636 MTERF3Q96E29 417 aa17.6■□□□□ 0.41
CIRBP-202ENST00000413636 RNF31Q96EP0 1072 aa17.6■□□□□ 0.41
CIRBP-202ENST00000413636 REXO4Q9GZR2 422 aaKnown RBP17.6■□□□□ 0.41
CIRBP-202ENST00000413636 VCX3BQ9H321 246 aa17.6■□□□□ 0.41
CIRBP-202ENST00000413636 ENAMQ9NRM1 1142 aa17.6■□□□□ 0.41
CIRBP-202ENST00000413636 MRPS2Q9Y399 296 aaKnown RBP17.6■□□□□ 0.41
CIRBP-202ENST00000413636 SCN3AQ9NY46 2000 aa17.59■□□□□ 0.41
CIRBP-202ENST00000413636 HYKKA2RU49 373 aa17.59■□□□□ 0.41
CIRBP-202ENST00000413636 FITM1A5D6W6 292 aa17.59■□□□□ 0.41
CIRBP-202ENST00000413636 SAP18O00422 153 aaKnown RBP17.59■□□□□ 0.41
CIRBP-202ENST00000413636 TIAF1O95411 115 aa17.59■□□□□ 0.41
CIRBP-202ENST00000413636 DDX5P17844 614 aaKnown RBP17.59■□□□□ 0.41
CIRBP-202ENST00000413636 ID4P47928 161 aa17.59■□□□□ 0.41
CIRBP-202ENST00000413636 ERFP50548 548 aa17.59■□□□□ 0.41
CIRBP-202ENST00000413636 STXBP1P61764 594 aaKnown RBP17.59■□□□□ 0.41
CIRBP-202ENST00000413636 PHC1P78364 1004 aa17.59■□□□□ 0.41
CIRBP-202ENST00000413636 MAP7Q14244 749 aa17.59■□□□□ 0.41
CIRBP-202ENST00000413636 UGT8Q16880 541 aa17.59■□□□□ 0.41
CIRBP-202ENST00000413636 ADPRMQ3LIE5 342 aa17.59■□□□□ 0.41
CIRBP-202ENST00000413636 RUNDC3AQ59EK9 446 aa17.59■□□□□ 0.41
CIRBP-202ENST00000413636 MANEAQ5SRI9 462 aa17.59■□□□□ 0.41
CIRBP-202ENST00000413636 CPTPQ5TA50 214 aa17.59■□□□□ 0.41
CIRBP-202ENST00000413636 LCN8Q6JVE9 175 aa17.59■□□□□ 0.41
CIRBP-202ENST00000413636 PWWP2BQ6NUJ5 590 aa17.59■□□□□ 0.41
CIRBP-202ENST00000413636 BPHLQ86WA6 291 aaPredicted RBP17.59■□□□□ 0.41
CIRBP-202ENST00000413636 TMEM126BQ8IUX1 230 aa17.59■□□□□ 0.41
CIRBP-202ENST00000413636 NUDT8Q8WV74 236 aa17.59■□□□□ 0.41
CIRBP-202ENST00000413636 MS4A6EQ96DS6 147 aa17.59■□□□□ 0.41
CIRBP-202ENST00000413636 GBP5Q96PP8 586 aa17.59■□□□□ 0.41
CIRBP-202ENST00000413636 ECSITQ9BQ95 431 aa17.59■□□□□ 0.41
CIRBP-202ENST00000413636 EFHD1Q9BUP0 239 aa17.59■□□□□ 0.41
CIRBP-202ENST00000413636 MYNNQ9NPC7 610 aa17.59■□□□□ 0.41
CIRBP-202ENST00000413636 ATAD3AQ9NVI7 634 aa17.59■□□□□ 0.41
CIRBP-202ENST00000413636 VAPAQ9P0L0 249 aa17.59■□□□□ 0.41
CIRBP-202ENST00000413636 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.59■□□□□ 0.41
CIRBP-202ENST00000413636 TCRBV3S1A0A5B6 114 aa17.58■□□□□ 0.41
CIRBP-202ENST00000413636 C4orf51C9J302 202 aa17.58■□□□□ 0.41
CIRBP-202ENST00000413636 ZNF749O43361 778 aa17.58■□□□□ 0.41
CIRBP-202ENST00000413636 AKAP10O43572 662 aa17.58■□□□□ 0.41
CIRBP-202ENST00000413636 MED26O95402 600 aa17.58■□□□□ 0.41
CIRBP-202ENST00000413636 ZNF888P0CJ79 500 aaPredicted RBP17.58■□□□□ 0.41
CIRBP-202ENST00000413636 ARFIP1P53367 373 aa17.58■□□□□ 0.41
CIRBP-202ENST00000413636 MRPS22P82650 360 aaKnown RBP17.58■□□□□ 0.41
CIRBP-202ENST00000413636 FOXC1Q12948 553 aa17.58■□□□□ 0.41
CIRBP-202ENST00000413636 FXNQ16595 210 aa17.58■□□□□ 0.41
CIRBP-202ENST00000413636 TMEM214Q6NUQ4 689 aaKnown RBP17.58■□□□□ 0.41
CIRBP-202ENST00000413636 ARHGEF39Q8N4T4 335 aa17.58■□□□□ 0.41
CIRBP-202ENST00000413636 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.58■□□□□ 0.41
CIRBP-202ENST00000413636 GFM2Q969S9 779 aaKnown RBP17.58■□□□□ 0.41
CIRBP-202ENST00000413636 COQ8BQ96D53 544 aa17.58■□□□□ 0.41
CIRBP-202ENST00000413636 C10orf90Q96M02 699 aa17.58■□□□□ 0.41
CIRBP-202ENST00000413636 DUSP26Q9BV47 211 aa17.58■□□□□ 0.41
CIRBP-202ENST00000413636 PAIP1Q9H074 479 aaKnown RBP17.58■□□□□ 0.41
CIRBP-202ENST00000413636 REEP4Q9H6H4 257 aa17.58■□□□□ 0.41
CIRBP-202ENST00000413636 SERHLQ9NQF3 203 aa17.58■□□□□ 0.41
CIRBP-202ENST00000413636 ATP6V1HQ9UI12 483 aa17.58■□□□□ 0.41
CIRBP-202ENST00000413636 ADAM29Q9UKF5 820 aa17.58■□□□□ 0.41
CIRBP-202ENST00000413636 PCDHB3Q9Y5E6 796 aa17.58■□□□□ 0.41
CIRBP-202ENST00000413636 SNX13Q9Y5W8 968 aa17.58■□□□□ 0.41
CIRBP-202ENST00000413636 TRBV5-3A0A0A0MS03 114 aa17.58■□□□□ 0.4
CIRBP-202ENST00000413636 PRSS51A0A1B0GVH4 220 aa17.58■□□□□ 0.4
CIRBP-202ENST00000413636 URADA6NGE7 173 aa17.58■□□□□ 0.4
CIRBP-202ENST00000413636 H3BNX3 289 aa17.58■□□□□ 0.4
CIRBP-202ENST00000413636 RFXANKO14593 260 aa17.58■□□□□ 0.4
CIRBP-202ENST00000413636 ERI3O43414 337 aaKnown RBP17.58■□□□□ 0.4
CIRBP-202ENST00000413636 SCRG1O75711 98 aa17.58■□□□□ 0.4
CIRBP-202ENST00000413636 B3GALT4O96024 378 aa17.58■□□□□ 0.4
CIRBP-202ENST00000413636 PLA2G16P53816 162 aa17.58■□□□□ 0.4
CIRBP-202ENST00000413636 RAB15P59190 212 aa17.58■□□□□ 0.4
CIRBP-202ENST00000413636 RAB8AP61006 207 aa17.58■□□□□ 0.4
CIRBP-202ENST00000413636 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.58■□□□□ 0.4
CIRBP-202ENST00000413636 TMEM35AQ53FP2 167 aa17.58■□□□□ 0.4
CIRBP-202ENST00000413636 DCAF12Q5T6F0 453 aa17.58■□□□□ 0.4
CIRBP-202ENST00000413636 OR4F3Q6IEY1 312 aa17.58■□□□□ 0.4
CIRBP-202ENST00000413636 CEACAM20Q6UY09 585 aa17.58■□□□□ 0.4
CIRBP-202ENST00000413636 OR2L5Q8NG80 312 aa17.58■□□□□ 0.4
CIRBP-202ENST00000413636 OR7A2PQ8NGA2 310 aa17.58■□□□□ 0.4
CIRBP-202ENST00000413636 UTP15Q8TED0 518 aaKnown RBP17.58■□□□□ 0.4
CIRBP-202ENST00000413636 GAL3ST3Q96A11 431 aa17.58■□□□□ 0.4
CIRBP-202ENST00000413636 RGMAQ96B86 450 aa17.58■□□□□ 0.4
CIRBP-202ENST00000413636 TAAR9Q96RI9 348 aa17.58■□□□□ 0.4
CIRBP-202ENST00000413636 NDC1Q9BTX1 674 aa17.58■□□□□ 0.4
CIRBP-202ENST00000413636 THUMPD3Q9BV44 507 aaKnown RBP17.58■□□□□ 0.4
CIRBP-202ENST00000413636 CUTCQ9NTM9 273 aa17.58■□□□□ 0.4
CIRBP-202ENST00000413636 BTNL2Q9UIR0 455 aa17.58■□□□□ 0.4
CIRBP-202ENST00000413636 PCDHB14Q9Y5E9 798 aa17.58■□□□□ 0.4
CIRBP-202ENST00000413636 B3GALT1Q9Y5Z6 326 aa17.58■□□□□ 0.4
CIRBP-202ENST00000413636 A0A0G2JN53 185 aa17.57■□□□□ 0.4
CIRBP-202ENST00000413636 ARHGAP10A1A4S6 786 aa17.57■□□□□ 0.4
CIRBP-202ENST00000413636 GABRR3A8MPY1 467 aa17.57■□□□□ 0.4
CIRBP-202ENST00000413636 GMNNO75496 209 aa17.57■□□□□ 0.4
CIRBP-202ENST00000413636 SLC7A1P30825 629 aa17.57■□□□□ 0.4
CIRBP-202ENST00000413636 HOXD11P31277 338 aaPredicted RBP17.57■□□□□ 0.4
CIRBP-202ENST00000413636 GCGRP47871 477 aa17.57■□□□□ 0.4
CIRBP-202ENST00000413636 EMP3P54852 163 aa17.57■□□□□ 0.4
CIRBP-202ENST00000413636 NDUFA9Q16795 377 aa17.57■□□□□ 0.4
CIRBP-202ENST00000413636 FAM214AQ32MH5 1076 aa17.57■□□□□ 0.4
CIRBP-202ENST00000413636 WLSQ5T9L3 541 aa17.57■□□□□ 0.4
CIRBP-202ENST00000413636 GARNL3Q5VVW2 1013 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms