RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 SEC23BQ15437 767 aa14.25□□□□□ -0.13
TTC39A-208ENST00000413473 ZNF77Q15935 545 aa14.25□□□□□ -0.13
TTC39A-208ENST00000413473 TIMM50Q3ZCQ8 353 aa14.25□□□□□ -0.13
TTC39A-208ENST00000413473 PRAMEF14Q5SWL7 426 aa14.25□□□□□ -0.13
TTC39A-208ENST00000413473 PRAMEF13Q5VWM6 474 aa14.25□□□□□ -0.13
TTC39A-208ENST00000413473 GDPD3Q7L5L3 318 aa14.25□□□□□ -0.13
TTC39A-208ENST00000413473 GPR32P1Q8NGA4 272 aa14.25□□□□□ -0.13
TTC39A-208ENST00000413473 APOBEC4Q8WW27 367 aaKnown RBP14.25□□□□□ -0.13
TTC39A-208ENST00000413473 SLC35B4Q969S0 331 aa14.25□□□□□ -0.13
TTC39A-208ENST00000413473 ZSWIM3Q96MP5 696 aa14.25□□□□□ -0.13
TTC39A-208ENST00000413473 ZDHHC5Q9C0B5 715 aa14.25□□□□□ -0.13
TTC39A-208ENST00000413473 ZCCHC2Q9C0B9 1178 aaKnown RBP14.25□□□□□ -0.13
TTC39A-208ENST00000413473 EHD3Q9NZN3 535 aa14.25□□□□□ -0.13
TTC39A-208ENST00000413473 SPATA7Q9P0W8 599 aa14.25□□□□□ -0.13
TTC39A-208ENST00000413473 MKLN1Q9UL63 735 aa14.25□□□□□ -0.13
TTC39A-208ENST00000413473 TMCC3Q9ULS5 477 aa14.25□□□□□ -0.13
TTC39A-208ENST00000413473 ARRDC5A6NEK1 342 aa14.25□□□□□ -0.13
TTC39A-208ENST00000413473 TLR4O00206 839 aa14.25□□□□□ -0.13
TTC39A-208ENST00000413473 CKMT1AP12532 417 aa14.25□□□□□ -0.13
TTC39A-208ENST00000413473 ACADLP28330 430 aa14.25□□□□□ -0.13
TTC39A-208ENST00000413473 TCTN3Q6NUS6 607 aa14.25□□□□□ -0.13
TTC39A-208ENST00000413473 CCBE1Q6UXH8 406 aaPredicted RBP14.25□□□□□ -0.13
TTC39A-208ENST00000413473 AKAP14Q86UN6 197 aa14.25□□□□□ -0.13
TTC39A-208ENST00000413473 SLC30A8Q8IWU4 369 aa14.25□□□□□ -0.13
TTC39A-208ENST00000413473 ADGRF3Q8IZF5 1079 aa14.25□□□□□ -0.13
TTC39A-208ENST00000413473 HCAR2Q8TDS4 363 aa14.25□□□□□ -0.13
TTC39A-208ENST00000413473 SETD7Q8WTS6 366 aaKnown RBP14.25□□□□□ -0.13
TTC39A-208ENST00000413473 TMEM19Q96HH6 336 aa14.25□□□□□ -0.13
TTC39A-208ENST00000413473 UCK2Q9BZX2 261 aa14.25□□□□□ -0.13
TTC39A-208ENST00000413473 EXOSC4Q9NPD3 245 aaKnown RBP14.25□□□□□ -0.13
TTC39A-208ENST00000413473 PAK6Q9NQU5 681 aaPredicted RBP14.25□□□□□ -0.13
TTC39A-208ENST00000413473 C5AR2Q9P296 337 aa14.25□□□□□ -0.13
TTC39A-208ENST00000413473 REV1Q9UBZ9 1251 aa14.25□□□□□ -0.13
TTC39A-208ENST00000413473 CFL2Q9Y281 166 aa14.25□□□□□ -0.13
TTC39A-208ENST00000413473 ASF1AQ9Y294 204 aa14.25□□□□□ -0.13
TTC39A-208ENST00000413473 RBMX2Q9Y388 322 aaKnown RBP14.25□□□□□ -0.13
TTC39A-208ENST00000413473 PRKAB1Q9Y478 270 aa14.25□□□□□ -0.13
TTC39A-208ENST00000413473 LRRK1Q38SD2 2015 aa14.25□□□□□ -0.13
TTC39A-208ENST00000413473 MYO10Q9HD67 2058 aa14.25□□□□□ -0.13
TTC39A-208ENST00000413473 DSPPQ9NZW4 1301 aa14.25□□□□□ -0.13
TTC39A-208ENST00000413473 NOTCH4Q99466 2003 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 CARNS1A5YM72 827 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 A8MU76 341 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 PSMD11O00231 422 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 PLPP1O14494 284 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 SH3BP5O60239 455 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 TBX6O95947 436 aaPredicted RBP14.24□□□□□ -0.13
TTC39A-208ENST00000413473 NTHL1P78549 312 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 DEFB115Q30KQ5 88 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 ARHGAP15Q53QZ3 475 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 TOR1AIP1Q5JTV8 583 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 FAM129CQ86XR2 697 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 RBM45Q8IUH3 476 aaKnown RBP14.24□□□□□ -0.13
TTC39A-208ENST00000413473 ZNF296Q8WUU4 475 aaPredicted RBP14.24□□□□□ -0.13
TTC39A-208ENST00000413473 TOX2Q96NM4 488 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 OPALINQ96PE5 141 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 F2RL3Q96RI0 385 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 CNPPD1Q9BV87 410 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 TAPBPLQ9BX59 468 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 SLC25A19Q9HC21 320 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 SAGE1Q9NXZ1 904 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 CLEC2DQ9UHP7 191 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 PNMA8CA0A1B0GUJ8 204 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 HIDE1A8MVS5 230 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 KMOO15229 486 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 OR10H3O60404 316 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 MFN2O95140 757 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 ADAP00813 363 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 RHOP08100 348 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 OSMP13725 252 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 DDCP20711 480 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 DGKGP49619 791 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 FAM83HQ6ZRV2 1179 aaPredicted RBP14.24□□□□□ -0.13
TTC39A-208ENST00000413473 CCDC190Q86UF4 302 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 KRT78Q8N1N4 520 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 SCAIQ8N9R8 606 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 OR5AR1Q8NGP9 310 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 VANGL1Q8TAA9 524 aaPredicted RBP14.24□□□□□ -0.13
TTC39A-208ENST00000413473 NUS1Q96E22 293 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 NEURL3Q96EH8 262 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 RNF208Q9H0X6 261 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 AHSPQ9NZD4 102 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 DNAJC27Q9NZQ0 273 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 NUMA1Q14980 2115 aa14.24□□□□□ -0.13
TTC39A-208ENST00000413473 H3BN98 237 aa14.23□□□□□ -0.13
TTC39A-208ENST00000413473 MMP20O60882 483 aa14.23□□□□□ -0.13
TTC39A-208ENST00000413473 COQ9O75208 318 aa14.23□□□□□ -0.13
TTC39A-208ENST00000413473 PTPN2P17706 415 aa14.23□□□□□ -0.13
TTC39A-208ENST00000413473 DDX6P26196 483 aaKnown RBP eCLIP14.23□□□□□ -0.13
TTC39A-208ENST00000413473 ETV6P41212 452 aa14.23□□□□□ -0.13
TTC39A-208ENST00000413473 MAPK12P53778 367 aa14.23□□□□□ -0.13
TTC39A-208ENST00000413473 ERVFC1P60507 584 aa14.23□□□□□ -0.13
TTC39A-208ENST00000413473 HSPB3Q12988 150 aa14.23□□□□□ -0.13
TTC39A-208ENST00000413473 ILKQ13418 452 aa14.23□□□□□ -0.13
TTC39A-208ENST00000413473 DCST1Q5T197 706 aa14.23□□□□□ -0.13
TTC39A-208ENST00000413473 SAXO2Q658L1 398 aa14.23□□□□□ -0.13
TTC39A-208ENST00000413473 WDR53Q7Z5U6 358 aaPredicted RBP14.23□□□□□ -0.13
TTC39A-208ENST00000413473 CACTIN-AS1Q8N1I8 211 aa14.23□□□□□ -0.13
TTC39A-208ENST00000413473 TM4SF18Q96CE8 201 aa14.23□□□□□ -0.13
TTC39A-208ENST00000413473 TRNT1Q96Q11 434 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms