RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 ZNF639Q9UID6 485 aa16.26■□□□□ 0.19
PTPRC-206ENST00000413409 PLAGL1Q9UM63 463 aa16.26■□□□□ 0.19
PTPRC-206ENST00000413409 CORO2BQ9UQ03 480 aa16.26■□□□□ 0.19
PTPRC-206ENST00000413409 POLQO75417 2590 aa16.26■□□□□ 0.19
PTPRC-206ENST00000413409 RNASET2O00584 256 aaKnown RBP16.25■□□□□ 0.19
PTPRC-206ENST00000413409 DEAF1O75398 565 aaPredicted RBP16.25■□□□□ 0.19
PTPRC-206ENST00000413409 PRSS23O95084 383 aa16.25■□□□□ 0.19
PTPRC-206ENST00000413409 RASAL1O95294 804 aa16.25■□□□□ 0.19
PTPRC-206ENST00000413409 CSF2P04141 144 aa16.25■□□□□ 0.19
PTPRC-206ENST00000413409 POU3F2P20265 443 aaPredicted RBP16.25■□□□□ 0.19
PTPRC-206ENST00000413409 PTX3P26022 381 aaPredicted RBP16.25■□□□□ 0.19
PTPRC-206ENST00000413409 PKLRP30613 574 aa16.25■□□□□ 0.19
PTPRC-206ENST00000413409 CHRNB3Q05901 458 aa16.25■□□□□ 0.19
PTPRC-206ENST00000413409 NR0B2Q15466 257 aa16.25■□□□□ 0.19
PTPRC-206ENST00000413409 PYCR3Q53H96 274 aa16.25■□□□□ 0.19
PTPRC-206ENST00000413409 OR52E8Q6IFG1 317 aa16.25■□□□□ 0.19
PTPRC-206ENST00000413409 ANKRD46Q86W74 232 aa16.25■□□□□ 0.19
PTPRC-206ENST00000413409 SLC35F3Q8IY50 421 aa16.25■□□□□ 0.19
PTPRC-206ENST00000413409 EID3Q8N140 333 aa16.25■□□□□ 0.19
PTPRC-206ENST00000413409 VPS37AQ8NEZ2 397 aa16.25■□□□□ 0.19
PTPRC-206ENST00000413409 GPR156Q8NFN8 814 aa16.25■□□□□ 0.19
PTPRC-206ENST00000413409 FIG4Q92562 907 aa16.25■□□□□ 0.19
PTPRC-206ENST00000413409 GFM2Q969S9 779 aaKnown RBP16.25■□□□□ 0.19
PTPRC-206ENST00000413409 FAM162AQ96A26 154 aa16.25■□□□□ 0.19
PTPRC-206ENST00000413409 BMFQ96LC9 184 aa16.25■□□□□ 0.19
PTPRC-206ENST00000413409 C12orf66Q96MD2 445 aa16.25■□□□□ 0.19
PTPRC-206ENST00000413409 PANX1Q96RD7 426 aa16.25■□□□□ 0.19
PTPRC-206ENST00000413409 CCDC3Q9BQI4 270 aa16.25■□□□□ 0.19
PTPRC-206ENST00000413409 CHID1Q9BWS9 393 aa16.25■□□□□ 0.19
PTPRC-206ENST00000413409 PIF1Q9H611 641 aa16.25■□□□□ 0.19
PTPRC-206ENST00000413409 REEP4Q9H6H4 257 aa16.25■□□□□ 0.19
PTPRC-206ENST00000413409 MVB12BQ9H7P6 319 aa16.25■□□□□ 0.19
PTPRC-206ENST00000413409 ATAD3AQ9NVI7 634 aa16.25■□□□□ 0.19
PTPRC-206ENST00000413409 TAC3Q9UHF0 121 aa16.25■□□□□ 0.19
PTPRC-206ENST00000413409 WBP11Q9Y2W2 641 aaKnown RBP16.25■□□□□ 0.19
PTPRC-206ENST00000413409 CSNK1G3Q9Y6M4 447 aa16.25■□□□□ 0.19
PTPRC-206ENST00000413409 AP1M2Q9Y6Q5 423 aa16.25■□□□□ 0.19
PTPRC-206ENST00000413409 GNG14A0A1W2PPG7 69 aa16.24■□□□□ 0.19
PTPRC-206ENST00000413409 A0A1W2PPV9 198 aa16.24■□□□□ 0.19
PTPRC-206ENST00000413409 C7orf72A4D263 438 aa16.24■□□□□ 0.19
PTPRC-206ENST00000413409 SAC3D1A6NKF1 404 aa16.24■□□□□ 0.19
PTPRC-206ENST00000413409 SOCS2O14508 198 aa16.24■□□□□ 0.19
PTPRC-206ENST00000413409 TPST1O60507 370 aa16.24■□□□□ 0.19
PTPRC-206ENST00000413409 LAMP1P11279 417 aa16.24■□□□□ 0.19
PTPRC-206ENST00000413409 NME1P15531 152 aaKnown RBP16.24■□□□□ 0.19
PTPRC-206ENST00000413409 IDSP22304 550 aa16.24■□□□□ 0.19
PTPRC-206ENST00000413409 RAB28P51157 221 aa16.24■□□□□ 0.19
PTPRC-206ENST00000413409 CCR8P51685 355 aa16.24■□□□□ 0.19
PTPRC-206ENST00000413409 KCNAB2Q13303 367 aa16.24■□□□□ 0.19
PTPRC-206ENST00000413409 SPIDRQ14159 915 aa16.24■□□□□ 0.19
PTPRC-206ENST00000413409 HKDC1Q2TB90 917 aa16.24■□□□□ 0.19
PTPRC-206ENST00000413409 CPZQ66K79 652 aa16.24■□□□□ 0.19
PTPRC-206ENST00000413409 CHST15Q7LFX5 561 aaPredicted RBP16.24■□□□□ 0.19
PTPRC-206ENST00000413409 VN1R5Q7Z5H4 357 aa16.24■□□□□ 0.19
PTPRC-206ENST00000413409 PHACTR4Q8IZ21 702 aa16.24■□□□□ 0.19
PTPRC-206ENST00000413409 OR4K1Q8NGD4 311 aa16.24■□□□□ 0.19
PTPRC-206ENST00000413409 CDC26Q8NHZ8 85 aa16.24■□□□□ 0.19
PTPRC-206ENST00000413409 MIEF2Q96C03 454 aa16.24■□□□□ 0.19
PTPRC-206ENST00000413409 INSM2Q96T92 566 aaPredicted RBP16.24■□□□□ 0.19
PTPRC-206ENST00000413409 SLC29A1Q99808 456 aa16.24■□□□□ 0.19
PTPRC-206ENST00000413409 BDH2Q9BUT1 245 aa16.24■□□□□ 0.19
PTPRC-206ENST00000413409 AHSPQ9NZD4 102 aa16.24■□□□□ 0.19
PTPRC-206ENST00000413409 SUFUQ9UMX1 484 aa16.24■□□□□ 0.19
PTPRC-206ENST00000413409 PCDHB11Q9Y5F2 797 aa16.24■□□□□ 0.19
PTPRC-206ENST00000413409 HEBP2Q9Y5Z4 205 aa16.24■□□□□ 0.19
PTPRC-206ENST00000413409 ITPR3Q14573 2671 aa16.24■□□□□ 0.19
PTPRC-206ENST00000413409 ARHGAP10A1A4S6 786 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 POM121BA6NF01 834 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 CLOCKO15516 846 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 AQP9O43315 295 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 KDM1AO60341 852 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 CREG1O75629 220 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 B3GALT4O96024 378 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 FUCA1P04066 466 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 GSNP06396 782 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 GPX2P18283 190 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 HNRNPA2B1P22626 353 aaKnown RBP16.23■□□□□ 0.19
PTPRC-206ENST00000413409 AKT2P31751 481 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 GSTM5P46439 218 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 NRF1Q16656 503 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 TPRG1LQ5T0D9 272 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 C6orf52Q5T4I8 152 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 FAM71E1Q6IPT2 247 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 DUS1LQ6P1R4 473 aaKnown RBP16.23■□□□□ 0.19
PTPRC-206ENST00000413409 CARM1Q86X55 608 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 DTX1Q86Y01 620 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 CBR4Q8N4T8 237 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 ZSCAN1Q8NBB4 408 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 OR2L8Q8NGY9 312 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 GOT1L1Q8NHS2 421 aaPredicted RBP16.23■□□□□ 0.19
PTPRC-206ENST00000413409 NCLNQ969V3 563 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 SH3KBP1Q96B97 665 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 AURKBQ96GD4 344 aaPredicted RBP16.23■□□□□ 0.19
PTPRC-206ENST00000413409 RNF145Q96MT1 663 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 OR2M4Q96R27 311 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 FERD3LQ96RJ6 166 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 CENPKQ9BS16 269 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 TBCDQ9BTW9 1192 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 MS4A8Q9BY19 250 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 ANKRD60Q9BZ19 345 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms