RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 SOX17Q9H6I2 414 aaPredicted RBP5.01□□□□□ -1.61
HERC4-205ENST00000412272 RNF122Q9H9V4 155 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 POPDC2Q9HBU9 364 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 SPAG4Q9NPE6 437 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 IL26Q9NPH9 171 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 NANSQ9NR45 359 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 GFOD1Q9NXC2 390 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 PTTG3PQ9NZH4 202 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 STAP1Q9ULZ2 295 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 SLC5A6Q9Y289 635 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 MRPS18BQ9Y676 258 aaKnown RBP5.01□□□□□ -1.61
HERC4-205ENST00000412272 FNDC1Q4ZHG4 1894 aaPredicted RBP5.01□□□□□ -1.61
HERC4-205ENST00000412272 SLC35F4A4IF30 521 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 TMEM191CA6NGB0 347 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 C3orf70A6NLC5 250 aaPredicted RBP5.01□□□□□ -1.61
HERC4-205ENST00000412272 MKRN2OSH3BPM6 223 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 CYB561D2O14569 222 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 PROM1O43490 865 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 SLC37A4O43826 429 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 RECQL5O94762 991 aaPredicted RBP5.01□□□□□ -1.61
HERC4-205ENST00000412272 SPDEFO95238 335 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 TBX18O95935 607 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 LALBAP00709 142 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 TGM4P49221 684 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 SOX10P56693 466 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 PKIAP61925 76 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 RRAS2P62070 204 aaPredicted RBP5.01□□□□□ -1.61
HERC4-205ENST00000412272 TNFRSF17Q02223 184 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 BOP1Q14137 746 aaKnown RBP5.01□□□□□ -1.61
HERC4-205ENST00000412272 SMAD1Q15797 465 aaKnown RBP5.01□□□□□ -1.61
HERC4-205ENST00000412272 SV2CQ496J9 727 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 PLA1AQ53H76 456 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 ARHGAP17Q68EM7 881 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 BAIAP2L2Q6UXY1 529 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 CERS6Q6ZMG9 384 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 THAP5Q7Z6K1 395 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 ISCA2Q86U28 154 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 NAA40Q86UY6 237 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 PTRH1Q86Y79 214 aaKnown RBP5.01□□□□□ -1.61
HERC4-205ENST00000412272 C8orf59Q8N0T1 100 aaPredicted RBP5.01□□□□□ -1.61
HERC4-205ENST00000412272 MTMR14Q8NCE2 650 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 FBXO22Q8NEZ5 403 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 THAP3Q8WTV1 239 aaPredicted RBP5.01□□□□□ -1.61
HERC4-205ENST00000412272 OIT3Q8WWZ8 545 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 ASB15Q8WXK1 588 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 GPKOWQ92917 476 aaPredicted RBP eCLIP5.01□□□□□ -1.61
HERC4-205ENST00000412272 ZBED3Q96IU2 234 aaPredicted RBP5.01□□□□□ -1.61
HERC4-205ENST00000412272 SPATA13Q96N96 652 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 ACBD6Q9BR61 282 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 BARHL1Q9BZE3 327 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 ELOVL4Q9GZR5 314 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 BRF2Q9HAW0 419 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 PNPOQ9NVS9 261 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 OBP2AQ9NY56 170 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 QSER1Q2KHR3 1735 aa5.01□□□□□ -1.61
HERC4-205ENST00000412272 GREB1LQ9C091 1923 aaPredicted RBP5□□□□□ -1.61
HERC4-205ENST00000412272 PNMA8CA0A1B0GUJ8 204 aa5□□□□□ -1.61
HERC4-205ENST00000412272 ABHD14A-ACY1A0A1B0GW23 586 aa5□□□□□ -1.61
HERC4-205ENST00000412272 A0A1W2PPE3 182 aa5□□□□□ -1.61
HERC4-205ENST00000412272 TCRBV5S2A0A599 114 aa5□□□□□ -1.61
HERC4-205ENST00000412272 CXCL11O14625 94 aa5□□□□□ -1.61
HERC4-205ENST00000412272 SOX15O60248 233 aa5□□□□□ -1.61
HERC4-205ENST00000412272 MAFKO60675 156 aa5□□□□□ -1.61
HERC4-205ENST00000412272 KHDRBS3O75525 346 aaKnown RBP5□□□□□ -1.61
HERC4-205ENST00000412272 SGPL1O95470 568 aa5□□□□□ -1.61
HERC4-205ENST00000412272 GJB1P08034 283 aa5□□□□□ -1.61
HERC4-205ENST00000412272 SMPD1P17405 629 aa5□□□□□ -1.61
HERC4-205ENST00000412272 EFNA1P20827 205 aaPredicted RBP5□□□□□ -1.61
HERC4-205ENST00000412272 DNASE1P24855 282 aa5□□□□□ -1.61
HERC4-205ENST00000412272 FASP25445 335 aa5□□□□□ -1.61
HERC4-205ENST00000412272 RPS19P39019 145 aaKnown RBP5□□□□□ -1.61
HERC4-205ENST00000412272 GDNFP39905 211 aa5□□□□□ -1.61
HERC4-205ENST00000412272 KIR2DL3P43628 341 aa5□□□□□ -1.61
HERC4-205ENST00000412272 HSPA7P48741 367 aa5□□□□□ -1.61
HERC4-205ENST00000412272 MRPL19P49406 292 aaKnown RBP5□□□□□ -1.61
HERC4-205ENST00000412272 GPR15P49685 360 aa5□□□□□ -1.61
HERC4-205ENST00000412272 EPHB3P54753 998 aa5□□□□□ -1.61
HERC4-205ENST00000412272 LSM6P62312 80 aaKnown RBP5□□□□□ -1.61
HERC4-205ENST00000412272 RAP1AP62834 184 aa5□□□□□ -1.61
HERC4-205ENST00000412272 FOXM1Q08050 763 aa5□□□□□ -1.61
HERC4-205ENST00000412272 ACSM1Q08AH1 577 aa5□□□□□ -1.61
HERC4-205ENST00000412272 GAB1Q13480 694 aa5□□□□□ -1.61
HERC4-205ENST00000412272 ZNF239Q16600 458 aaKnown RBP5□□□□□ -1.61
HERC4-205ENST00000412272 GUCA2BQ16661 112 aa5□□□□□ -1.61
HERC4-205ENST00000412272 PCGF3Q3KNV8 242 aa5□□□□□ -1.61
HERC4-205ENST00000412272 GXYLT1Q4G148 440 aa5□□□□□ -1.61
HERC4-205ENST00000412272 NCMAPQ5T1S8 102 aa5□□□□□ -1.61
HERC4-205ENST00000412272 ADNP2Q6IQ32 1131 aa5□□□□□ -1.61
HERC4-205ENST00000412272 FAM111BQ6SJ93 734 aa5□□□□□ -1.61
HERC4-205ENST00000412272 PGAP1Q75T13 922 aa5□□□□□ -1.61
HERC4-205ENST00000412272 PHF13Q86YI8 300 aaPredicted RBP5□□□□□ -1.61
HERC4-205ENST00000412272 CBLN2Q8IUK8 224 aa5□□□□□ -1.61
HERC4-205ENST00000412272 IGDCC3Q8IVU1 814 aa5□□□□□ -1.61
HERC4-205ENST00000412272 GCNT2Q8N0V5 402 aa5□□□□□ -1.61
HERC4-205ENST00000412272 ATPAF2Q8N5M1 289 aa5□□□□□ -1.61
HERC4-205ENST00000412272 OR4C15Q8NGM1 316 aa5□□□□□ -1.61
HERC4-205ENST00000412272 ZC3HAV1LQ96H79 300 aaKnown RBP5□□□□□ -1.61
HERC4-205ENST00000412272 SIGLEC11Q96RL6 698 aa5□□□□□ -1.61
HERC4-205ENST00000412272 SUCNR1Q9BXA5 334 aa5□□□□□ -1.61
HERC4-205ENST00000412272 SLC29A3Q9BZD2 475 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms