RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 VPS41P49754 854 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 ATP4BP51164 291 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 DGKEP52429 567 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 RBM5P52756 815 aaKnown RBP eCLIP-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 ALDH18A1P54886 795 aaKnown RBP-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 NLRP11P59045 1033 aaKnown RBP-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 PTENP60484 403 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 MYBPC1Q00872 1141 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 TWF1Q12792 350 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 IFT88Q13099 833 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 PSMD2Q13200 908 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 GPR17Q13304 367 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 EXOC3L2Q2M3D2 409 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 ALDH1L2Q3SY69 923 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 FILIP1LQ4L180 1135 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 SYTL3Q4VX76 610 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 NHLRC3Q5JS37 347 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 SAMD4BQ5PRF9 694 aaKnown RBP-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 SPATA46Q5T0L3 261 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 ZNF773Q6PK81 442 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 IDO2Q6ZQW0 420 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 CYB5R4Q7L1T6 521 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 ARCQ7LC44 396 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 PTAR1Q7Z6K3 402 aaPredicted RBP-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 BIVMQ86UB2 503 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 JAZF1Q86VZ6 243 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 SNX32Q86XE0 403 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 VPS37DQ86XT2 251 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 CACUL1Q86Y37 369 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 TMC8Q8IU68 726 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 SCCPDHQ8NBX0 429 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 NECAP1Q8NC96 275 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 APCDD1LQ8NCL9 501 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 TRPV1Q8NER1 839 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 OR2T33Q8NG76 320 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 OR51G1Q8NGK1 321 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 SLC35F5Q8WV83 523 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 IP6K1Q92551 441 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 APPBP2Q92624 585 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 KAT5Q92993 513 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 NAT6Q93015 286 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 CREB3L1Q96BA8 519 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 ELP4Q96EB1 424 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 ATXN7L3BQ96GX2 97 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 APIPQ96GX9 242 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 SLC41A2Q96JW4 573 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 DNAJC30Q96LL9 226 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 RAD9AQ99638 391 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 MAP3K3Q99759 626 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 KLHDC3Q9BQ90 382 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 DDX23Q9BUQ8 820 aaKnown RBP-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 IFI27L2Q9H2X8 130 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 ACTR5Q9H9F9 607 aaPredicted RBP-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 RANGRFQ9HD47 186 aaPredicted RBP-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 TRPV5Q9NQA5 729 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 MIEF1Q9NQG6 463 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 DIABLOQ9NR28 239 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 SH3GLB2Q9NR46 395 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 WSB2Q9NYS7 404 aaPredicted RBP-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 DHRS4-AS1Q9P1J3 65 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 RCOR3Q9P2K3 495 aaPredicted RBP-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 PCSK1NQ9UHG2 260 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 CD207Q9UJ71 328 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 HAO1Q9UJM8 370 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 ITGA11Q9UKX5 1188 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 ENTPD4Q9Y227 616 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 WDR37Q9Y2I8 494 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 RIPOR2Q9Y4F9 1068 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 DTNAQ9Y4J8 743 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 LRRFIP2Q9Y608 721 aaKnown RBP-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 SNURFQ9Y675 71 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 AP4B1Q9Y6B7 739 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 SLC4A4Q9Y6R1 1079 aa-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 CFAP65Q6ZU64 1925 aaKnown RBP-1.85□□□□□ -2.71
RNU4-88P-201ENST00000411220 DSCAML1Q8TD84 2053 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 FRMPD3Q5JV73 1810 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 CDK12Q9NYV4 1490 aaPredicted RBP-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 A0A1B0GTH9 108 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 MACROD2A1Z1Q3 448 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 FAM234BA2RU67 622 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 RPL37AP8A6NKH3 93 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 ZNF726A6NNF4 738 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 C15orf61A6NNL5 157 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 KNCNA6PVL3 124 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 LAD1O00515 517 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 PPIP5K2O43314 1243 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 THAP12O43422 761 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 TRAF3IP2O43734 574 aaPredicted RBP-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 PRAMEF2O60811 474 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 DUSP11O75319 330 aaKnown RBP-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 UNC5CO95185 931 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 CDS2O95674 445 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 MAP4K4O95819 1239 aaPredicted RBP-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 PFN1P07737 140 aaKnown RBP-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 CD37P11049 281 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 CCDC130P13994 396 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 LIFP15018 202 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 DDX5P17844 614 aaKnown RBP-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 LMO2P25791 158 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 TNFSF8P32971 234 aa-1.86□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms