RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 BRWD1-AS2P59051 145 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 HNRNPKP61978 463 aaKnown RBP eCLIP2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 SNRPD1P62314 119 aaKnown RBP2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 GUCY2DQ02846 1103 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 ZNF415Q09FC8 603 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 LCP2Q13094 533 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 ITGA9Q13797 1035 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 GIT2Q14161 759 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 NFE2L1Q14494 772 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 RBBP5Q15291 538 aaKnown RBP2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 CTU2Q2VPK5 515 aaKnown RBP2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 IQCCQ4KMZ1 466 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 IFI44LQ53G44 452 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 ZRANB3Q5FWF4 1079 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 ZSCAN25Q6NSZ9 544 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 ALKBH5Q6P6C2 394 aaKnown RBP2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 GBP6Q6ZN66 633 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 TMEM182Q6ZP80 229 aaPredicted RBP2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 SLC24A5Q71RS6 500 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 MARK2Q7KZI7 788 aaKnown RBP2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 ZER1Q7Z7L7 766 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 ERC1Q8IUD2 1116 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 CROCCP3Q8IVE0 287 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 KIRREL3Q8IZU9 778 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 ELMOD1Q8N336 334 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 BMPERQ8N8U9 685 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 GBP7Q8N8V2 638 aaPredicted RBP2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 LEMD2Q8NC56 503 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 TRPV1Q8NER1 839 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 LPCAT1Q8NF37 534 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 Q8NFD4 153 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 DBF4BQ8NFT6 615 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 OR7A2PQ8NGA2 310 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 OR10Q1Q8NGQ4 319 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 OR6S1Q8NH40 331 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 FIBINQ8TAL6 211 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 FCAMRQ8WWV6 532 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 EXOC4Q96A65 974 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 ULK4Q96C45 1275 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 AP2M1Q96CW1 435 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 KRT12Q99456 494 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 GPATCH1Q9BRR8 931 aaKnown RBP2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 FAM213AQ9BRX8 229 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 FUCA2Q9BTY2 467 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 TDRD1Q9BXT4 1180 aaKnown RBP2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 FTHL17Q9BXU8 183 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 LRRC2Q9BYS8 371 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 BARHL1Q9BZE3 327 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 FAM129AQ9BZQ8 928 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 API5Q9BZZ5 524 aaKnown RBP2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 OR2B2Q9GZK3 357 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 MFSD1Q9H3U5 465 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 RIMS4Q9H426 269 aaPredicted RBP2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 CHMP4BQ9H444 224 aaKnown RBP2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 TLE6Q9H808 572 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 SRD5A3Q9H8P0 318 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 MTHFD2LQ9H903 347 aaPredicted RBP2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 SP140LQ9H930 580 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 SEPT10Q9P0V9 454 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 MAD2L2Q9UI95 211 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 PRDM4Q9UKN5 801 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 FBXW2Q9UKT8 454 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 STX8Q9UNK0 236 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 ERVK-19Q9WJR5 959 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 KCNK7Q9Y2U2 307 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 GVINP1Q7Z2Y8 2422 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 STK36Q9NRP7 1315 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 DMDP11532 3685 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 ZNF236Q9UL36 1845 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 CACNA1BQ00975 2339 aa2.33□□□□□ -2.04
RNU6-1140P-201ENST00000410517 MAST2Q6P0Q8 1798 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 FEZF1A0PJY2 475 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 C5orf60A6NFR6 353 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 LOC730098B7Z3J9 87 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 FAM86B1E9PN63 330 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 MPHOSPH10O00566 681 aaKnown RBP2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 TEX28O15482 410 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 SLC7A4O43246 635 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 GLCEO94923 617 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 LETM1O95202 739 aaPredicted RBP2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 IGLV2-11P01706 119 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 VTNP04004 478 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 RAF1P04049 648 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 ATP1B1P05026 303 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 FAM86B2P0C5J1 330 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 SP9P0CG40 484 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 UROSP10746 265 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 GOT1P17174 413 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 CYP11B2P19099 503 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 AZGP1P25311 298 aaKnown RBP2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 CTNNA2P26232 953 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 ELAVL4P26378 380 aaKnown RBP2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 SSTR1P30872 391 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 TIA1P31483 386 aaKnown RBP eCLIP2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 DCTP40126 519 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 ALDH3B1P43353 468 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 CCL23P55773 120 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 CLDN15P56746 228 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 GSDMDP57764 484 aa2.32□□□□□ -2.04
RNU6-1140P-201ENST00000410517 DCDC1P59894 354 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms