RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 NEU3Q9UQ49 428 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 CMAHPQ9Y471 501 aa4.02□□□□□ -1.77
CLK1-203ENST00000409769 NYNRINQ9P2P1 1898 aaKnown RBP4.02□□□□□ -1.77
CLK1-203ENST00000409769 TRANK1O15050 2925 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 hCG_1818297A0A087WSY0 165 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 CCL16O15467 120 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 COCHO43405 550 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 SH3BP5O60239 455 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 PRPSAP2O60256 369 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 ZNF217O75362 1048 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 FGF19O95750 216 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 KRT7P08729 469 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 CD48P09326 243 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 RALAP11233 206 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 KDELR1P24390 212 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 IL4RP24394 825 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 HRH2P25021 359 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 GABRR2P28476 465 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 CDC25CP30307 473 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 HOXC13P31276 330 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 CA8P35219 290 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 TIMP3P35625 211 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 CDKN2BP42772 138 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 MSH2P43246 934 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 NRIP1P48552 1158 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 CRIP2P52943 208 aaPredicted RBP4.01□□□□□ -1.77
CLK1-203ENST00000409769 MLLT10P55197 1068 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 RWDD2BP57060 319 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 SLC7A9P82251 487 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 NME3Q13232 169 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 TUBB2AQ13885 445 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 DPYSL3Q14195 570 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 PDK2Q15119 407 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 SIX1Q15475 284 aaPredicted RBP4.01□□□□□ -1.77
CLK1-203ENST00000409769 CA9Q16790 459 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 HADHQ16836 314 aaKnown RBP4.01□□□□□ -1.77
CLK1-203ENST00000409769 WHAMMP3Q1A5X7 153 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 BOLA3Q53S33 107 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 TCEAL5Q5H9L2 206 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 BRMS1LQ5PSV4 323 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 ERMARDQ5T6L9 678 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 MFSD7Q6UXD7 560 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 KCTD8Q6ZWB6 473 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 ZNF534Q76KX8 674 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 MARK2Q7KZI7 788 aaKnown RBP4.01□□□□□ -1.77
CLK1-203ENST00000409769 CCDC190Q86UF4 302 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 FAM131BQ86XD5 332 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 SLC13A5Q86YT5 568 aaPredicted RBP4.01□□□□□ -1.77
CLK1-203ENST00000409769 RCOR2Q8IZ40 523 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 CIARTQ8N365 385 aaPredicted RBP4.01□□□□□ -1.77
CLK1-203ENST00000409769 SLC5A8Q8N695 610 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 UBL4BQ8N7F7 174 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 WDSUB1Q8N9V3 476 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 LEMD2Q8NC56 503 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 DMBX1Q8NFW5 382 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 EXD1Q8NHP7 514 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 FBXO17Q96EF6 278 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 SERPINB11Q96P15 392 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 SLC22A12Q96S37 553 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 PSMB7Q99436 277 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 ZNF670Q9BS34 389 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 TUBB2BQ9BVA1 445 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 LRMDAQ9H2I8 198 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 TLE6Q9H808 572 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 GPATCH2LQ9NWQ4 482 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 DDIT4Q9NX09 232 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 RNF14Q9UBS8 474 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 PCSK1NQ9UHG2 260 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 HBS1LQ9Y450 684 aaKnown RBP4.01□□□□□ -1.77
CLK1-203ENST00000409769 MTCH2Q9Y6C9 303 aa4.01□□□□□ -1.77
CLK1-203ENST00000409769 CLUHO75153 1309 aa4□□□□□ -1.77
CLK1-203ENST00000409769 MIA3Q5JRA6 1907 aa4□□□□□ -1.77
CLK1-203ENST00000409769 MYO10Q9HD67 2058 aa4□□□□□ -1.77
CLK1-203ENST00000409769 IGLV3-10A0A075B6K4 115 aa4□□□□□ -1.77
CLK1-203ENST00000409769 IGLV5-45A0A087WSX0 123 aa4□□□□□ -1.77
CLK1-203ENST00000409769 A0A1W2PR77 199 aa4□□□□□ -1.77
CLK1-203ENST00000409769 LRRD1A4D1F6 860 aa4□□□□□ -1.77
CLK1-203ENST00000409769 C5orf60A6NFR6 353 aa4□□□□□ -1.77
CLK1-203ENST00000409769 C15orf62A8K5M9 175 aa4□□□□□ -1.77
CLK1-203ENST00000409769 AGAP14A8MT82 685 aa4□□□□□ -1.77
CLK1-203ENST00000409769 FAM72CH0Y354 149 aa4□□□□□ -1.77
CLK1-203ENST00000409769 PGRMC1O00264 195 aaKnown RBP4□□□□□ -1.77
CLK1-203ENST00000409769 DVL1O14640 695 aa4□□□□□ -1.77
CLK1-203ENST00000409769 PRKNO60260 465 aaPredicted RBP4□□□□□ -1.77
CLK1-203ENST00000409769 TBX10O75333 385 aa4□□□□□ -1.77
CLK1-203ENST00000409769 WISP2O76076 250 aa4□□□□□ -1.77
CLK1-203ENST00000409769 PAK4O96013 591 aaPredicted RBP4□□□□□ -1.77
CLK1-203ENST00000409769 FGGP02679 453 aa4□□□□□ -1.77
CLK1-203ENST00000409769 DESP17661 470 aa4□□□□□ -1.77
CLK1-203ENST00000409769 CCR1P32246 355 aa4□□□□□ -1.77
CLK1-203ENST00000409769 ATP5C1P36542 298 aaKnown RBP4□□□□□ -1.77
CLK1-203ENST00000409769 GARSP41250 739 aaKnown RBP4□□□□□ -1.77
CLK1-203ENST00000409769 HCAR3P49019 387 aa4□□□□□ -1.77
CLK1-203ENST00000409769 DNA2P51530 1060 aa4□□□□□ -1.77
CLK1-203ENST00000409769 CDH6P55285 790 aa4□□□□□ -1.77
CLK1-203ENST00000409769 COG7P83436 770 aa4□□□□□ -1.77
CLK1-203ENST00000409769 DPYSQ14117 519 aa4□□□□□ -1.77
CLK1-203ENST00000409769 TEAD2Q15562 447 aa4□□□□□ -1.77
CLK1-203ENST00000409769 KRT71Q3SY84 523 aa4□□□□□ -1.77
CLK1-203ENST00000409769 TFDP3Q5H9I0 405 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms