RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 FAF1Q9UNN5 650 aaPredicted RBP13.35□□□□□ -0.27
LIMS2-206ENST00000409754 AP4B1Q9Y6B7 739 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 PTPRZ1P23471 2315 aaPredicted RBP13.35□□□□□ -0.27
LIMS2-206ENST00000409754 C7orf72A4D263 438 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 OR5K3A6NET4 321 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 B4DGG1 531 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 SOCS2O14508 198 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 TXNDC9O14530 226 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 VILLO15195 856 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 ACOX3O15254 700 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 CTSVO60911 334 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 RASAL1O95294 804 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 MT-ND1P03886 318 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 NUDT7P0C024 238 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 SOAT1P35610 550 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 PLA2G5P39877 138 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 CRATP43155 626 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 CSNK1EP49674 416 aaKnown RBP13.35□□□□□ -0.27
LIMS2-206ENST00000409754 NXPH1P58417 271 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 RAB8AP61006 207 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 NRF1Q16656 503 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 COX20Q5RI15 118 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.35□□□□□ -0.27
LIMS2-206ENST00000409754 GCNT6Q5T4J0 391 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 MARVELD2Q8N4S9 558 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 CBR4Q8N4T8 237 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 PSMA8Q8TAA3 256 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 EXOSC8Q96B26 276 aaKnown RBP13.35□□□□□ -0.27
LIMS2-206ENST00000409754 FCRL4Q96PJ5 515 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 OSBPL11Q9BXB4 747 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 ROGDIQ9GZN7 287 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 TMEM38AQ9H6F2 299 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 CXorf36Q9H7Y0 433 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 UCK1Q9HA47 277 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 EVA1BQ9NVM1 165 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 RAB23Q9ULC3 237 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 OAZ3Q9UMX2 235 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 AK5Q9Y6K8 562 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 MDC1Q14676 2089 aaKnown RBP13.34□□□□□ -0.27
LIMS2-206ENST00000409754 A0A0J9YVX5 310 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 A0A1W2PR48 441 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 LNP1A1A4G5 178 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 MAGEA13PA6NCF6 341 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 URADA6NGE7 173 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 BCAT2O15382 392 aaPredicted RBP13.34□□□□□ -0.27
LIMS2-206ENST00000409754 GFRA3O60609 400 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 SMIM10L1P0DMW3 83 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 ETFAP13804 333 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 CERS1P27544 350 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 FASLGP48023 281 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 LSSP48449 732 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 MRPS35P82673 323 aaKnown RBP13.34□□□□□ -0.27
LIMS2-206ENST00000409754 BLMHQ13867 455 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 C16orf72Q14CZ0 275 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 LRRC23Q53EV4 343 aaPredicted RBP13.34□□□□□ -0.27
LIMS2-206ENST00000409754 WDR45BQ5MNZ6 344 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 ARMC6Q6NXE6 501 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 ANGPTL8Q6UXH0 198 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 CBLL1Q75N03 491 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 RNF44Q7L0R7 432 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 EIF3MQ7L2H7 374 aaKnown RBP13.34□□□□□ -0.27
LIMS2-206ENST00000409754 RNF130Q86XS8 419 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 SDR16C5Q8N3Y7 309 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 KCT2Q8NC54 265 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 CAMKVQ8NCB2 501 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 OR2I1PQ8NGU4 316 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 LMX1AQ8TE12 382 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 UTP15Q8TED0 518 aaKnown RBP13.34□□□□□ -0.27
LIMS2-206ENST00000409754 RSC1A1Q92681 617 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 NEURL3Q96EH8 262 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 SMIM10Q96HG1 83 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 VPS50Q96JG6 964 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 ZFYVE21Q9BQ24 234 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 NTN4Q9HB63 628 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 SLC35C2Q9NQQ7 365 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 BATF3Q9NR55 127 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 C1GALT1Q9NS00 363 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 SEMA4GQ9NTN9 838 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 C5AR2Q9P296 337 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 DNAJB9Q9UBS3 223 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 UTS2RQ9UKP6 389 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 ACSL6Q9UKU0 697 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 CABIN1Q9Y6J0 2220 aa13.34□□□□□ -0.27
LIMS2-206ENST00000409754 RNF103-CHMP3A0A140T963 221 aa13.33□□□□□ -0.28
LIMS2-206ENST00000409754 A0A1B0GVT2 93 aa13.33□□□□□ -0.28
LIMS2-206ENST00000409754 UPK1AO00322 258 aa13.33□□□□□ -0.28
LIMS2-206ENST00000409754 ZNF806P0C7X5 589 aa13.33□□□□□ -0.28
LIMS2-206ENST00000409754 ZNF888P0CJ79 500 aaPredicted RBP13.33□□□□□ -0.28
LIMS2-206ENST00000409754 HOXD12P35452 270 aa13.33□□□□□ -0.28
LIMS2-206ENST00000409754 MAGEA2P43356 314 aa13.33□□□□□ -0.28
LIMS2-206ENST00000409754 BTN3A2P78410 334 aa13.33□□□□□ -0.28
LIMS2-206ENST00000409754 SUZ12Q15022 739 aaKnown RBP13.33□□□□□ -0.28
LIMS2-206ENST00000409754 PDK3Q15120 406 aa13.33□□□□□ -0.28
LIMS2-206ENST00000409754 TRIM61Q5EBN2 209 aa13.33□□□□□ -0.28
LIMS2-206ENST00000409754 SAXO2Q658L1 398 aa13.33□□□□□ -0.28
LIMS2-206ENST00000409754 FAM180BQ6P0A1 224 aa13.33□□□□□ -0.28
LIMS2-206ENST00000409754 SLC23A3Q6PIS1 610 aa13.33□□□□□ -0.28
LIMS2-206ENST00000409754 OR5AK3PQ8NH89 298 aa13.33□□□□□ -0.28
LIMS2-206ENST00000409754 UCN3Q969E3 161 aa13.33□□□□□ -0.28
LIMS2-206ENST00000409754 ASPSCR1Q9BZE9 553 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms