RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 TPRG1LQ5T0D9 272 aa8.09□□□□□ -1.12
SCN9A-203ENST00000409672 CCDC36Q8IYA8 594 aa8.09□□□□□ -1.12
SCN9A-203ENST00000409672 H1FXQ92522 213 aaKnown RBP8.09□□□□□ -1.12
SCN9A-203ENST00000409672 HERPUD2Q9BSE4 406 aa8.09□□□□□ -1.12
SCN9A-203ENST00000409672 WACQ9BTA9 647 aa8.09□□□□□ -1.12
SCN9A-203ENST00000409672 NENFQ9UMX5 172 aa8.09□□□□□ -1.12
SCN9A-203ENST00000409672 MAN2B2Q9Y2E5 1009 aa8.09□□□□□ -1.12
SCN9A-203ENST00000409672 TLR4O00206 839 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 WDPCPO95876 746 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 PRKCAP17252 672 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 SOX3P41225 446 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 LSSP48449 732 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 RSU1Q15404 277 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 TSTQ16762 297 aaKnown RBP8.08□□□□□ -1.12
SCN9A-203ENST00000409672 SMPDL3AQ92484 453 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 ANKRD7Q92527 254 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 CHFRQ96EP1 664 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 AKTIPQ9H8T0 292 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 RDH14Q9HBH5 336 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 EPHA6Q9UF33 1036 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 ZNF180Q9UJW8 692 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 ITGB1BP2Q9UKP3 347 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 C2orf72A6NCS6 295 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 PRORSD1PA6NEY8 169 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 A8MV72 311 aaPredicted RBP8.08□□□□□ -1.12
SCN9A-203ENST00000409672 NFKBIEO00221 500 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 RTCAO00442 366 aaKnown RBP8.08□□□□□ -1.12
SCN9A-203ENST00000409672 MYOGP15173 224 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 NTSR1P30989 418 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 GPR4P46093 362 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 NAA20P61599 178 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 AIMP2Q13155 320 aaKnown RBP8.08□□□□□ -1.12
SCN9A-203ENST00000409672 PON3Q15166 354 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 SHQ1Q6PI26 577 aaKnown RBP8.08□□□□□ -1.12
SCN9A-203ENST00000409672 RAB43Q86YS6 212 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 NELFAQ9H3P2 528 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 ACVR1BP36896 505 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 FGL1Q08830 312 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 NCEH1Q6PIU2 408 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 HORMAD2Q8N7B1 307 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 TOE1Q96GM8 510 aaKnown RBP8.08□□□□□ -1.12
SCN9A-203ENST00000409672 C16orf58Q96GQ5 468 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 TMEM74Q96NL1 305 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 ZNF347Q96SE7 839 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 TSSK6Q9BXA6 273 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 GPR62Q9BZJ7 368 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 TWSG1Q9GZX9 223 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 ANKRD28O15084 1053 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 KDELR3O43731 214 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 DNAJA2O60884 412 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 PRKACGP22612 351 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 CXCL12P48061 93 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 LIPIQ6XZB0 460 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 FRMD7Q6ZUT3 714 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 MOCOSQ96EN8 888 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 KAT8Q9H7Z6 458 aaKnown RBP8.08□□□□□ -1.12
SCN9A-203ENST00000409672 ATXN10Q9UBB4 475 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 CA5BQ9Y2D0 317 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 A0A0U1RQF3 1178 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 METTL21EPA6NDL7 271 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 C2CD4BA6NLJ0 364 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 SNX3O60493 162 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 CHRNB4P30926 498 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 HNRNPDQ14103 355 aaKnown RBP8.08□□□□□ -1.12
SCN9A-203ENST00000409672 LRRC38Q5VT99 294 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 MINDY2Q8NBR6 621 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 IL1F10Q8WWZ1 152 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 TPSB2P20231 275 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 DSC1Q08554 894 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 TPSAB1Q15661 275 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 SLC14A2Q15849 920 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 C6orf183Q5T699 404 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 AGTRAPQ6RW13 159 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 DPY19L3Q6ZPD9 716 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 ARHGAP22Q7Z5H3 698 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 OSTM1Q86WC4 334 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 PQLC1Q8N2U9 271 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 DEFB123Q8N688 67 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 RBM15BQ8NDT2 890 aaKnown RBP8.08□□□□□ -1.12
SCN9A-203ENST00000409672 NUDT22Q9BRQ3 303 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 COQ10BQ9H8M1 238 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 TLL2Q9Y6L7 1015 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 DOK2O60496 412 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 LIMK2P53671 638 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 CDNFQ49AH0 187 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 CDONQ4KMG0 1287 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 FAM76BQ5HYJ3 339 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 PROKR1Q8TCW9 393 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 DAZLQ92904 295 aaKnown RBP8.08□□□□□ -1.12
SCN9A-203ENST00000409672 ACSS3Q9H6R3 686 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 MAGEE1Q9HCI5 957 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.08□□□□□ -1.12
SCN9A-203ENST00000409672 DZANK1Q9NVP4 752 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 TAS2R7Q9NYW3 318 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 ZNF638Q14966 1978 aaKnown RBP8.08□□□□□ -1.12
SCN9A-203ENST00000409672 STK17BO94768 372 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 LCATP04180 440 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 CHRM4P08173 479 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 PFKMP08237 780 aa8.08□□□□□ -1.12
SCN9A-203ENST00000409672 GNAO1P09471 354 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms