RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 SPATA7Q9P0W8 599 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 PHF11Q9UIL8 331 aa10.85□□□□□ -0.67
SNX13-202ENST00000409604 AKAP6Q13023 2319 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 A0A0J9YY10 115 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 GABRR3A8MPY1 467 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 KRT33AO76009 404 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 EML2O95834 649 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 AOC1P19801 751 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 CLK3P49761 638 aaKnown RBP10.84□□□□□ -0.67
SNX13-202ENST00000409604 ABATP80404 500 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 PCDH1Q08174 1060 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 NRROSQ86YC3 692 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 SLC15A3Q8IY34 581 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 OR9Q1Q8NGQ5 310 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 ZNF483Q8TF39 744 aaPredicted RBP10.84□□□□□ -0.67
SNX13-202ENST00000409604 ZNF184Q99676 751 aaPredicted RBP10.84□□□□□ -0.67
SNX13-202ENST00000409604 C9orf16Q9BUW7 83 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 CCDC106Q9BWC9 280 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 NRSN2Q9GZP1 204 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 TMEM185BQ9H7F4 350 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 MARCH7Q9H992 704 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 MKS1Q9NXB0 559 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 SAMD4AQ9UPU9 718 aaKnown RBP10.84□□□□□ -0.67
SNX13-202ENST00000409604 PTRH2Q9Y3E5 179 aaKnown RBP10.84□□□□□ -0.67
SNX13-202ENST00000409604 PCDHB14Q9Y5E9 798 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 PIEZO1Q92508 2521 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 IGHV1OR15-9A0A0B4J2B8 117 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 PRORSD1PA6NEY8 169 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 DCDC1P59894 354 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 MCCD1P59942 119 aaPredicted RBP10.84□□□□□ -0.67
SNX13-202ENST00000409604 LTB4RQ15722 352 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 BTBD16Q32M84 506 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 ZFP1Q6P2D0 407 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 SLCO4C1Q6ZQN7 724 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 MAVSQ7Z434 540 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 GALNT12Q8IXK2 581 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 NAGSQ8N159 534 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 OAZ3Q9UMX2 235 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 HYKKA2RU49 373 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 SPINT1O43278 529 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 RSL1D1O76021 490 aaKnown RBP10.84□□□□□ -0.67
SNX13-202ENST00000409604 LDOC1O95751 146 aaPredicted RBP10.84□□□□□ -0.67
SNX13-202ENST00000409604 FABP3P05413 133 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 PAICSP22234 425 aaKnown RBP10.84□□□□□ -0.67
SNX13-202ENST00000409604 INPP1P49441 399 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 DMWDQ09019 674 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 SLC29A4Q7RTT9 530 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 DTWD1Q8N5C7 304 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 MINDY1Q8N5J2 469 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 MFSD2AQ8NA29 543 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 RIT1Q92963 219 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 MAPKAP1Q9BPZ7 522 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 DCUN1D5Q9BTE7 237 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 DEFB126Q9BYW3 111 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 ULBP3Q9BZM4 244 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 QRSL1Q9H0R6 528 aaKnown RBP10.84□□□□□ -0.67
SNX13-202ENST00000409604 SLC35C2Q9NQQ7 365 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 TMPRSS11EQ9UL52 423 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 CORO2BQ9UQ03 480 aa10.84□□□□□ -0.67
SNX13-202ENST00000409604 EI24O14681 340 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 ALPPP05187 535 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 NUDT7P0C024 238 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 JAK1P23458 1154 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 ITGA3P26006 1051 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 CTSKP43235 329 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 ACVR1Q04771 509 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 TARDBPQ13148 414 aaKnown RBP eCLIP10.83□□□□□ -0.687e-7■■■■□ 23
SNX13-202ENST00000409604 SF3A2Q15428 464 aaKnown RBP10.83□□□□□ -0.68
SNX13-202ENST00000409604 FAM111BQ6SJ93 734 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 FATE1Q969F0 183 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 CEP19Q96LK0 163 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 IL4I1Q96RQ9 567 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 LRRC61Q9BV99 259 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 COQ10BQ9H8M1 238 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 TMEM27Q9HBJ8 222 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 SUCOQ9UBS9 1254 aaKnown RBP10.83□□□□□ -0.68
SNX13-202ENST00000409604 SH2B3Q9UQQ2 575 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 ERVK-19Q9WJR5 959 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 C17orf113A0A1B0GUU1 675 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 HCRTR2O43614 444 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 FOXL2P58012 376 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 TPRG1LQ5T0D9 272 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 BLOC1S3Q6QNY0 202 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.83□□□□□ -0.68
SNX13-202ENST00000409604 ROPN1LQ96C74 230 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 CNDP2Q96KP4 475 aaKnown RBP10.83□□□□□ -0.68
SNX13-202ENST00000409604 OR51V1Q9H2C8 321 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 OR51I1Q9H343 314 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 Q9N2J8 555 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 TOR4AQ9NXH8 423 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 SLC39A1Q9NY26 324 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 HCN4Q9Y3Q4 1203 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 COL4A6Q14031 1691 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 SPTY2D1-AS1A0A0U1RR47 76 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 MCIDASD6RGH6 385 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 CHST10O43529 356 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 CREG1O75629 220 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 PDE9AO76083 593 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 BCL6P41182 706 aa10.83□□□□□ -0.68
SNX13-202ENST00000409604 NR0B1P51843 470 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms