RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 PHIPQ8WWQ0 1821 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 COL11A1P12107 1806 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 A0A1B0GW55 424 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 PIPSLA2A3N6 862 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 H7C2Y5 167 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 GTPBP1O00178 669 aaKnown RBP5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 DUX4L2P0CJ85 424 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 DUX4L3P0CJ86 424 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 DUX4L4P0CJ87 422 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 DUX4L5P0CJ88 424 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 DUX4L6P0CJ89 424 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 DUX4L7P0CJ90 424 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 NR2F6P10588 404 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 CXCL3P19876 107 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 POU1F1P28069 291 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 SLC6A4P31645 630 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 IRS1P35568 1242 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 RPL35P42766 123 aaKnown RBP5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 PIK3CGP48736 1102 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 MEOX2P50222 304 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 SLC10A7Q0GE19 358 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 LRRC32Q14392 662 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 PTPRCAPQ14761 206 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 NTRK2Q16620 822 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 SLC27A1Q6PCB7 646 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 CASP12Q6UXS9 341 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 ALKAL1Q6UXT8 129 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 WASH2PQ6VEQ5 465 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 GPRIN1Q7Z2K8 1008 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 TRPV1Q8NER1 839 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 OR9Q2Q8NGE9 314 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 ARRDC2Q8TBH0 407 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 GTPBP3Q969Y2 492 aaKnown RBP5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 CHFRQ96EP1 664 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 FCRL2Q96LA5 508 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 SPATA33Q96N06 139 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 UBL7Q96S82 380 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 SMOQ99835 787 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 DPH2Q9BQC3 489 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 THAP7Q9BT49 309 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 TSSK6Q9BXA6 273 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 ACTR6Q9GZN1 396 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 MS4A7Q9GZW8 240 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 RNF19AQ9NV58 838 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 FAM120CQ9NX05 1096 aaKnown RBP5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 DUX4Q9UBX2 424 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 PPT2Q9UMR5 302 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 SLC6A14Q9UN76 642 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 PPIEQ9UNP9 301 aaKnown RBP5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 PCDHB11Q9Y5F2 797 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 RAI2Q9Y5P3 530 aa5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 DNMT3AQ9Y6K1 912 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-202ENST00000409478 TRAV6A0A075B6T7 132 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 PDCD5O14737 125 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 IRAK2O43187 625 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 PRMT3O60678 531 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 NIPSNAP2O75323 286 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 IGLV3-25P01717 112 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 BPIP17213 487 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 PRPS1L1P21108 318 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 PRPH2P23942 346 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 HMGA2P52926 109 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 WNT4P56705 351 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 CRYZQ08257 329 aaKnown RBP5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 IL10RBQ08334 325 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 LTB4RQ15722 352 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 OCLNQ16625 522 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 SGO1Q5FBB7 561 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 PABPC1L2AQ5JQF8 200 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 ZNF704Q6ZNC4 412 aaPredicted RBP5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 USP45Q70EL2 814 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 UMODL1-AS1Q8N2C9 162 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 LINC01465Q8N7H1 131 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 AQP11Q8NBQ7 271 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 MTMR14Q8NCE2 650 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 C11orf65Q8NCR3 313 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 OR8J1Q8NGP2 316 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 SLC22A8Q8TCC7 542 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 ADAMTS14Q8WXS8 1223 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 TMEM203Q969S6 136 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 TSSK3Q96PN8 268 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 PIP5K1AQ99755 562 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 POLR1EQ9GZS1 481 aaKnown RBP5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 CXCL16Q9H2A7 254 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 TLR8Q9NR97 1041 aaKnown RBP5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 COA4Q9NYJ1 87 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 HACL1Q9UJ83 578 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 EXO1Q9UQ84 846 aaKnown RBP5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 PTCH2Q9Y6C5 1203 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 NUP205Q92621 2012 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 LOC285556D6RIA3 1793 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 TRDV1A0A1B0GX56 115 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 DNASE2O00115 360 aaPredicted RBP5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 SSNA1O43805 119 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 SLC28A2O43868 658 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 ADRB1P08588 477 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 UGT2B7P16662 529 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 ITPKAP23677 461 aa5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 RBMS1P29558 406 aaKnown RBP5.57□□□□□ -1.52
R3HDM1-202ENST00000409478 AVPR1BP47901 424 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms