RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 FGF4P08620 206 aa18.59■□□□□ 0.57
PDLIM2-207ENST00000409417 NR1D1P20393 614 aa18.59■□□□□ 0.57
PDLIM2-207ENST00000409417 MAPK12P53778 367 aa18.59■□□□□ 0.57
PDLIM2-207ENST00000409417 SLC18A1P54219 525 aa18.59■□□□□ 0.57
PDLIM2-207ENST00000409417 HMGCS1Q01581 520 aa18.59■□□□□ 0.57
PDLIM2-207ENST00000409417 STX4Q12846 297 aa18.59■□□□□ 0.57
PDLIM2-207ENST00000409417 TERF2Q15554 542 aa18.59■□□□□ 0.57
PDLIM2-207ENST00000409417 BTBD16Q32M84 506 aa18.59■□□□□ 0.57
PDLIM2-207ENST00000409417 C18orf63Q68DL7 685 aa18.59■□□□□ 0.57
PDLIM2-207ENST00000409417 CLEC6AQ6EIG7 209 aa18.59■□□□□ 0.57
PDLIM2-207ENST00000409417 JMJD6Q6NYC1 403 aaPredicted RBP18.59■□□□□ 0.57
PDLIM2-207ENST00000409417 SCIMPQ6UWF3 145 aa18.59■□□□□ 0.57
PDLIM2-207ENST00000409417 C1orf52Q8N6N3 182 aaKnown RBP18.59■□□□□ 0.57
PDLIM2-207ENST00000409417 C7orf57Q8NEG2 295 aa18.59■□□□□ 0.57
PDLIM2-207ENST00000409417 VIPAS39Q9H9C1 493 aa18.59■□□□□ 0.57
PDLIM2-207ENST00000409417 TMEM120BA0PK00 339 aa18.58■□□□□ 0.57
PDLIM2-207ENST00000409417 WDR91A4D1P6 747 aa18.58■□□□□ 0.57
PDLIM2-207ENST00000409417 C1QL1O75973 258 aa18.58■□□□□ 0.57
PDLIM2-207ENST00000409417 CELA2AP08217 269 aa18.58■□□□□ 0.57
PDLIM2-207ENST00000409417 NR2F6P10588 404 aa18.58■□□□□ 0.57
PDLIM2-207ENST00000409417 PPP2R1BP30154 601 aa18.58■□□□□ 0.57
PDLIM2-207ENST00000409417 ARRB2P32121 409 aa18.58■□□□□ 0.57
PDLIM2-207ENST00000409417 NFATC3Q12968 1075 aa18.58■□□□□ 0.57
PDLIM2-207ENST00000409417 SERTAD2Q14140 314 aa18.58■□□□□ 0.57
PDLIM2-207ENST00000409417 SPIN4Q56A73 249 aa18.58■□□□□ 0.57
PDLIM2-207ENST00000409417 AGBL2Q5U5Z8 902 aa18.58■□□□□ 0.57
PDLIM2-207ENST00000409417 HPS6Q86YV9 775 aa18.58■□□□□ 0.57
PDLIM2-207ENST00000409417 ZNF843Q8N446 348 aa18.58■□□□□ 0.57
PDLIM2-207ENST00000409417 PPP1R14CQ8TAE6 165 aa18.58■□□□□ 0.57
PDLIM2-207ENST00000409417 M1APQ8TC57 530 aa18.58■□□□□ 0.57
PDLIM2-207ENST00000409417 PSMF1Q92530 271 aa18.58■□□□□ 0.57
PDLIM2-207ENST00000409417 ANKRD9Q96BM1 317 aaPredicted RBP18.58■□□□□ 0.57
PDLIM2-207ENST00000409417 ALOXE3Q9BYJ1 711 aa18.58■□□□□ 0.57
PDLIM2-207ENST00000409417 WDR41Q9HAD4 459 aa18.58■□□□□ 0.57
PDLIM2-207ENST00000409417 MMP25Q9NPA2 562 aa18.58■□□□□ 0.57
PDLIM2-207ENST00000409417 VTI1BQ9UEU0 232 aa18.58■□□□□ 0.57
PDLIM2-207ENST00000409417 TRAF6Q9Y4K3 522 aa18.58■□□□□ 0.57
PDLIM2-207ENST00000409417 SAGE2PA6NJ88 616 aa18.58■□□□□ 0.56
PDLIM2-207ENST00000409417 LDB3O75112 727 aa18.58■□□□□ 0.56
PDLIM2-207ENST00000409417 GUCY1B2O75343 617 aa18.58■□□□□ 0.56
PDLIM2-207ENST00000409417 AIFM1O95831 613 aa18.58■□□□□ 0.56
PDLIM2-207ENST00000409417 CHEK2O96017 543 aa18.58■□□□□ 0.56
PDLIM2-207ENST00000409417 SERPINE1P05121 402 aa18.58■□□□□ 0.56
PDLIM2-207ENST00000409417 ITGAMP11215 1152 aa18.58■□□□□ 0.56
PDLIM2-207ENST00000409417 SLC26A5P58743 744 aa18.58■□□□□ 0.56
PDLIM2-207ENST00000409417 ACSM2AQ08AH3 577 aa18.58■□□□□ 0.56
PDLIM2-207ENST00000409417 KANK2Q63ZY3 851 aa18.58■□□□□ 0.56
PDLIM2-207ENST00000409417 ACSM2BQ68CK6 577 aa18.58■□□□□ 0.56
PDLIM2-207ENST00000409417 GALNT18Q6P9A2 607 aa18.58■□□□□ 0.56
PDLIM2-207ENST00000409417 RNF165Q6ZSG1 346 aa18.58■□□□□ 0.56
PDLIM2-207ENST00000409417 CLYBLQ8N0X4 340 aa18.58■□□□□ 0.56
PDLIM2-207ENST00000409417 AMER2Q8N7J2 671 aa18.58■□□□□ 0.56
PDLIM2-207ENST00000409417 BRIX1Q8TDN6 353 aaKnown RBP18.58■□□□□ 0.56
PDLIM2-207ENST00000409417 C11orf24Q96F05 449 aaPredicted RBP18.58■□□□□ 0.56
PDLIM2-207ENST00000409417 ADAP2Q9NPF8 381 aa18.58■□□□□ 0.56
PDLIM2-207ENST00000409417 PNO1Q9NRX1 252 aaKnown RBP18.58■□□□□ 0.56
PDLIM2-207ENST00000409417 DNAJC15Q9Y5T4 150 aa18.58■□□□□ 0.56
PDLIM2-207ENST00000409417 ZNF462Q96JM2 2506 aa18.57■□□□□ 0.56
PDLIM2-207ENST00000409417 FGF17O60258 216 aa18.57■□□□□ 0.56
PDLIM2-207ENST00000409417 MYO1DO94832 1006 aa18.57■□□□□ 0.56
PDLIM2-207ENST00000409417 TRA2BP62995 288 aaKnown RBP18.57■□□□□ 0.56
PDLIM2-207ENST00000409417 IGLV3-21P80748 117 aaPredicted RBP18.57■□□□□ 0.56
PDLIM2-207ENST00000409417 BIKQ13323 160 aa18.57■□□□□ 0.56
PDLIM2-207ENST00000409417 ELAVL1Q15717 326 aaKnown RBP18.57■□□□□ 0.56
PDLIM2-207ENST00000409417 CHI3L2Q15782 390 aa18.57■□□□□ 0.56
PDLIM2-207ENST00000409417 IMPG1Q17R60 797 aa18.57■□□□□ 0.56
PDLIM2-207ENST00000409417 CRB2Q5IJ48 1285 aa18.57■□□□□ 0.56
PDLIM2-207ENST00000409417 SPDYAQ5MJ70 313 aa18.57■□□□□ 0.56
PDLIM2-207ENST00000409417 NDUFAF5Q5TEU4 345 aa18.57■□□□□ 0.56
PDLIM2-207ENST00000409417 HHATQ5VTY9 493 aa18.57■□□□□ 0.56
PDLIM2-207ENST00000409417 IGFL3Q6UXB1 125 aa18.57■□□□□ 0.56
PDLIM2-207ENST00000409417 ANKRD42Q8N9B4 389 aa18.57■□□□□ 0.56
PDLIM2-207ENST00000409417 NFAM1Q8NET5 270 aaPredicted RBP18.57■□□□□ 0.56
PDLIM2-207ENST00000409417 ARL8AQ96BM9 186 aa18.57■□□□□ 0.56
PDLIM2-207ENST00000409417 APIPQ96GX9 242 aa18.57■□□□□ 0.56
PDLIM2-207ENST00000409417 SIRT5Q9NXA8 310 aa18.57■□□□□ 0.56
PDLIM2-207ENST00000409417 TEX10Q9NXF1 929 aaPredicted RBP18.57■□□□□ 0.56
PDLIM2-207ENST00000409417 MCM8Q9UJA3 840 aa18.57■□□□□ 0.56
PDLIM2-207ENST00000409417 CCL27Q9Y4X3 112 aa18.57■□□□□ 0.56
PDLIM2-207ENST00000409417 BSNQ9UPA5 3926 aa18.56■□□□□ 0.56
PDLIM2-207ENST00000409417 GLOD5A6NK44 160 aa18.56■□□□□ 0.56
PDLIM2-207ENST00000409417 A8MUA0 341 aa18.56■□□□□ 0.56
PDLIM2-207ENST00000409417 PRKRAO75569 313 aaKnown RBP18.56■□□□□ 0.56
PDLIM2-207ENST00000409417 RSL1D1O76021 490 aaKnown RBP18.56■□□□□ 0.56
PDLIM2-207ENST00000409417 IFNA16P05015 189 aa18.56■□□□□ 0.56
PDLIM2-207ENST00000409417 GRK2P25098 689 aa18.56■□□□□ 0.56
PDLIM2-207ENST00000409417 SOX11P35716 441 aa18.56■□□□□ 0.56
PDLIM2-207ENST00000409417 ID2Q02363 134 aa18.56■□□□□ 0.56
PDLIM2-207ENST00000409417 FOLH1Q04609 750 aa18.56■□□□□ 0.56
PDLIM2-207ENST00000409417 UGT3A2Q3SY77 523 aa18.56■□□□□ 0.56
PDLIM2-207ENST00000409417 SH2D4BQ5SQS7 431 aa18.56■□□□□ 0.56
PDLIM2-207ENST00000409417 CES4AQ5XG92 561 aa18.56■□□□□ 0.56
PDLIM2-207ENST00000409417 ISLR2Q6UXK2 745 aa18.56■□□□□ 0.56
PDLIM2-207ENST00000409417 ATG14Q6ZNE5 492 aa18.56■□□□□ 0.56
PDLIM2-207ENST00000409417 OR4N5Q8IXE1 308 aa18.56■□□□□ 0.56
PDLIM2-207ENST00000409417 TM9SF4Q92544 642 aa18.56■□□□□ 0.56
PDLIM2-207ENST00000409417 LMF1Q96S06 567 aa18.56■□□□□ 0.56
PDLIM2-207ENST00000409417 PAIP2Q9BPZ3 127 aaKnown RBP18.56■□□□□ 0.56
PDLIM2-207ENST00000409417 NKIRAS1Q9NYS0 192 aa18.56■□□□□ 0.56
PDLIM2-207ENST00000409417 PPIEQ9UNP9 301 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms