RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 CSF3RQ99062 836 aa15.35■□□□□ 0.05
CHMP3-203ENST00000409225 ALOXE3Q9BYJ1 711 aa15.35■□□□□ 0.05
CHMP3-203ENST00000409225 TAS2R13Q9NYV9 303 aa15.35■□□□□ 0.05
CHMP3-203ENST00000409225 STAB1Q9NY15 2570 aa15.34■□□□□ 0.05
CHMP3-203ENST00000409225 LRRC3CA6NJW4 275 aa15.34■□□□□ 0.05
CHMP3-203ENST00000409225 AHRRA9YTQ3 701 aa15.34■□□□□ 0.05
CHMP3-203ENST00000409225 C17orf105B2RV13 164 aa15.34■□□□□ 0.05
CHMP3-203ENST00000409225 B3GALT2O43825 422 aa15.34■□□□□ 0.05
CHMP3-203ENST00000409225 LRATO95237 230 aa15.34■□□□□ 0.05
CHMP3-203ENST00000409225 HNRNPH1P31943 449 aaKnown RBP15.34■□□□□ 0.05
CHMP3-203ENST00000409225 VPS41P49754 854 aa15.34■□□□□ 0.05
CHMP3-203ENST00000409225 AP1S2P56377 157 aa15.34■□□□□ 0.05
CHMP3-203ENST00000409225 STX4Q12846 297 aa15.34■□□□□ 0.05
CHMP3-203ENST00000409225 ANKRD22Q5VYY1 191 aa15.34■□□□□ 0.05
CHMP3-203ENST00000409225 ARMC3Q5W041 872 aa15.34■□□□□ 0.05
CHMP3-203ENST00000409225 THOC6Q86W42 341 aaKnown RBP15.34■□□□□ 0.05
CHMP3-203ENST00000409225 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.34■□□□□ 0.05
CHMP3-203ENST00000409225 KLHDC8AQ8IYD2 350 aa15.34■□□□□ 0.05
CHMP3-203ENST00000409225 LRRC25Q8N386 305 aaPredicted RBP15.34■□□□□ 0.05
CHMP3-203ENST00000409225 CALML6Q8TD86 181 aa15.34■□□□□ 0.05
CHMP3-203ENST00000409225 HSPBAP1Q96EW2 488 aa15.34■□□□□ 0.05
CHMP3-203ENST00000409225 BDH2Q9BUT1 245 aa15.34■□□□□ 0.05
CHMP3-203ENST00000409225 TRIM54Q9BYV2 358 aa15.34■□□□□ 0.05
CHMP3-203ENST00000409225 SH2D2AQ9NP31 389 aa15.34■□□□□ 0.05
CHMP3-203ENST00000409225 ACKR4Q9NPB9 350 aa15.34■□□□□ 0.05
CHMP3-203ENST00000409225 HOMER3Q9NSC5 361 aa15.34■□□□□ 0.05
CHMP3-203ENST00000409225 IARS2Q9NSE4 1012 aaKnown RBP15.34■□□□□ 0.05
CHMP3-203ENST00000409225 VTI1BQ9UEU0 232 aa15.34■□□□□ 0.05
CHMP3-203ENST00000409225 MAD1L1Q9Y6D9 718 aa15.34■□□□□ 0.05
CHMP3-203ENST00000409225 KIAA1549Q9HCM3 1950 aa15.34■□□□□ 0.05
CHMP3-203ENST00000409225 ATRQ13535 2644 aa15.33■□□□□ 0.05
CHMP3-203ENST00000409225 MAGEB16A2A368 324 aa15.33■□□□□ 0.04
CHMP3-203ENST00000409225 TRIM64A6NGJ6 449 aa15.33■□□□□ 0.04
CHMP3-203ENST00000409225 TRIM64BA6NI03 449 aa15.33■□□□□ 0.04
CHMP3-203ENST00000409225 SDR42E2A6NKP2 422 aa15.33■□□□□ 0.04
CHMP3-203ENST00000409225 CTNSO60931 367 aa15.33■□□□□ 0.04
CHMP3-203ENST00000409225 PLA2G16P53816 162 aa15.33■□□□□ 0.04
CHMP3-203ENST00000409225 CDKN2DP55273 166 aa15.33■□□□□ 0.04
CHMP3-203ENST00000409225 DUSP8Q13202 625 aa15.33■□□□□ 0.04
CHMP3-203ENST00000409225 ZNF791Q3KP31 576 aaPredicted RBP15.33■□□□□ 0.04
CHMP3-203ENST00000409225 HSP90AA5PQ58FG0 334 aa15.33■□□□□ 0.04
CHMP3-203ENST00000409225 PIGGQ5H8A4 983 aa15.33■□□□□ 0.04
CHMP3-203ENST00000409225 RBM20Q5T481 1227 aaKnown RBP15.33■□□□□ 0.04
CHMP3-203ENST00000409225 DRICH1Q6PGQ1 229 aaPredicted RBP15.33■□□□□ 0.04
CHMP3-203ENST00000409225 YTHDF3Q7Z739 585 aaKnown RBP15.33■□□□□ 0.04
CHMP3-203ENST00000409225 LMNTD2Q8IXW0 634 aa15.33■□□□□ 0.04
CHMP3-203ENST00000409225 MS4A6EQ96DS6 147 aa15.33■□□□□ 0.04
CHMP3-203ENST00000409225 QRFPRQ96P65 431 aa15.33■□□□□ 0.04
CHMP3-203ENST00000409225 WDR83Q9BRX9 315 aaKnown RBP15.33■□□□□ 0.04
CHMP3-203ENST00000409225 TSPY26PQ9H489 355 aa15.33■□□□□ 0.04
CHMP3-203ENST00000409225 QPCTLQ9NXS2 382 aa15.33■□□□□ 0.04
CHMP3-203ENST00000409225 TRPS1Q9UHF7 1281 aa15.33■□□□□ 0.04
CHMP3-203ENST00000409225 A0A088AWK7 358 aa15.32■□□□□ 0.04
CHMP3-203ENST00000409225 SYNDIG1LA6NDD5 238 aa15.32■□□□□ 0.04
CHMP3-203ENST00000409225 GOLGA8MH3BSY2 632 aa15.32■□□□□ 0.04
CHMP3-203ENST00000409225 CYR61O00622 381 aa15.32■□□□□ 0.04
CHMP3-203ENST00000409225 ZNF10P21506 573 aaPredicted RBP15.32■□□□□ 0.04
CHMP3-203ENST00000409225 CTSSP25774 331 aa15.32■□□□□ 0.04
CHMP3-203ENST00000409225 GDF1P27539 372 aa15.32■□□□□ 0.04
CHMP3-203ENST00000409225 CERS1P27544 350 aa15.32■□□□□ 0.04
CHMP3-203ENST00000409225 PGGT1BP53609 377 aa15.32■□□□□ 0.04
CHMP3-203ENST00000409225 LIM2P55344 173 aa15.32■□□□□ 0.04
CHMP3-203ENST00000409225 ID2Q02363 134 aa15.32■□□□□ 0.04
CHMP3-203ENST00000409225 CRYZQ08257 329 aaKnown RBP15.32■□□□□ 0.04
CHMP3-203ENST00000409225 MPEG1Q2M385 716 aa15.32■□□□□ 0.04
CHMP3-203ENST00000409225 LRRC75A-AS1Q8N1F1 130 aa15.32■□□□□ 0.04
CHMP3-203ENST00000409225 FAM13CQ8NE31 585 aa15.32■□□□□ 0.04
CHMP3-203ENST00000409225 PAQR8Q8TEZ7 354 aa15.32■□□□□ 0.04
CHMP3-203ENST00000409225 TRIB1Q96RU8 372 aa15.32■□□□□ 0.04
CHMP3-203ENST00000409225 TIMP4Q99727 224 aa15.32■□□□□ 0.04
CHMP3-203ENST00000409225 DESI2Q9BSY9 194 aa15.32■□□□□ 0.04
CHMP3-203ENST00000409225 FAM167BQ9BTA0 163 aa15.32■□□□□ 0.04
CHMP3-203ENST00000409225 PROK2Q9HC23 129 aa15.32■□□□□ 0.04
CHMP3-203ENST00000409225 COPS7AQ9UBW8 275 aa15.32■□□□□ 0.04
CHMP3-203ENST00000409225 CAMK2AQ9UQM7 478 aa15.32■□□□□ 0.04
CHMP3-203ENST00000409225 SLC22A14Q9Y267 594 aa15.32■□□□□ 0.04
CHMP3-203ENST00000409225 LRIT2A6NDA9 550 aa15.31■□□□□ 0.04
CHMP3-203ENST00000409225 CES2O00748 559 aa15.31■□□□□ 0.04
CHMP3-203ENST00000409225 LDB3O75112 727 aa15.31■□□□□ 0.04
CHMP3-203ENST00000409225 ETHE1O95571 254 aa15.31■□□□□ 0.04
CHMP3-203ENST00000409225 IL2P60568 153 aa15.31■□□□□ 0.04
CHMP3-203ENST00000409225 GPS1Q13098 491 aa15.31■□□□□ 0.04
CHMP3-203ENST00000409225 NSUN5P2Q63ZY6 315 aa15.31■□□□□ 0.04
CHMP3-203ENST00000409225 CAPN12Q6ZSI9 719 aa15.31■□□□□ 0.04
CHMP3-203ENST00000409225 RASGEF1CQ8N431 466 aa15.31■□□□□ 0.04
CHMP3-203ENST00000409225 GPATCH11Q8N954 259 aa15.31■□□□□ 0.04
CHMP3-203ENST00000409225 SLC22A8Q8TCC7 542 aa15.31■□□□□ 0.04
CHMP3-203ENST00000409225 ZNF721Q8TF20 911 aa15.31■□□□□ 0.04
CHMP3-203ENST00000409225 SPACA9Q96E40 222 aaPredicted RBP15.31■□□□□ 0.04
CHMP3-203ENST00000409225 DACH2Q96NX9 599 aa15.31■□□□□ 0.04
CHMP3-203ENST00000409225 RBM24Q9BX46 236 aaKnown RBP15.31■□□□□ 0.04
CHMP3-203ENST00000409225 JKAMPQ9P055 326 aa15.31■□□□□ 0.04
CHMP3-203ENST00000409225 EIF3LQ9Y262 564 aaKnown RBP15.31■□□□□ 0.04
CHMP3-203ENST00000409225 KCNE2Q9Y6J6 123 aa15.31■□□□□ 0.04
CHMP3-203ENST00000409225 ARID1AO14497 2285 aa15.31■□□□□ 0.04
CHMP3-203ENST00000409225 SH3D21A4FU49 640 aa15.3■□□□□ 0.04
CHMP3-203ENST00000409225 TRAPPC6AO75865 159 aa15.3■□□□□ 0.04
CHMP3-203ENST00000409225 OPRM1P35372 400 aa15.3■□□□□ 0.04
CHMP3-203ENST00000409225 MAGEA6P43360 314 aa15.3■□□□□ 0.04
CHMP3-203ENST00000409225 TBL3Q12788 808 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms