RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 ZDHHC11Q9H8X9 412 aa8.5□□□□□ -1.05
NIF3L1-203ENST00000409129 GRPEL1Q9HAV7 217 aa8.5□□□□□ -1.05
NIF3L1-203ENST00000409129 PRDM7Q9NQW5 492 aa8.5□□□□□ -1.05
NIF3L1-203ENST00000409129 DNAJC11Q9NVH1 559 aa8.5□□□□□ -1.05
NIF3L1-203ENST00000409129 NSMCE4AQ9NXX6 385 aa8.5□□□□□ -1.05
NIF3L1-203ENST00000409129 VTI1BQ9UEU0 232 aa8.5□□□□□ -1.05
NIF3L1-203ENST00000409129 DAPP1Q9UN19 280 aa8.5□□□□□ -1.05
NIF3L1-203ENST00000409129 TLN2Q9Y4G6 2542 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 FAM90A27PA6NNH2 459 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 FAM166BA8MTA8 275 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 ACOT7O00154 380 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 ZSCAN12O43309 604 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 PRAMEF4O60810 478 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 GLSO94925 669 aaPredicted RBP8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 SEC31AO94979 1220 aaKnown RBP8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 HOXD4P09016 255 aaPredicted RBP8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 TCP1P17987 556 aaKnown RBP8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 TNNI3P19429 210 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 MSX1P28360 303 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 HK2P52789 917 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 SLC12A2P55011 1212 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 PPP2R2AP63151 447 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 POU4F1Q01851 419 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 TGM3Q08188 693 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 STX4Q12846 297 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 PDIA2Q13087 525 aaKnown RBP8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 DOC2AQ14183 400 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 CDKL4Q5MAI5 379 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 NDUFAF5Q5TEU4 345 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 PRAMEF9Q5VWM5 478 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 TMEM198Q66K66 360 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 SULT1C3Q6IMI6 304 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 ADNP2Q6IQ32 1131 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 RTL4Q6ZR62 310 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 GK5Q6ZS86 529 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 GPSM1Q86YR5 675 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 SPATA6LQ8N4H0 392 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 ZNF321PQ8N8H1 164 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 OR5L2Q8NGL0 311 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 OR5M9Q8NGP3 310 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 OR5M3Q8NGP4 307 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 OR8K3Q8NH51 312 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 SREK1Q8WXA9 508 aaKnown RBP8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 ESAMQ96AP7 390 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 WDR34Q96EX3 536 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 PTCD3Q96EY7 689 aaKnown RBP8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 RUNDC3BQ96NL0 473 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 F2RL3Q96RI0 385 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 CSF3RQ99062 836 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 FAM173AQ9BQD7 235 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 TMEM79Q9BSE2 394 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 MCMBPQ9BTE3 642 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 TTTY12Q9BZ98 90 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 OR8D2Q9GZM6 311 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 ROGDIQ9GZN7 287 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 CNOT10Q9H9A5 744 aaKnown RBP8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 COPS7BQ9H9Q2 264 aaPredicted RBP8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 LYRM4Q9HD34 91 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 PNPLA3Q9NST1 481 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 CCM2LQ9NUG4 571 aaPredicted RBP8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 WWOXQ9NZC7 414 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 TNFRSF10DQ9UBN6 386 aa8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 MTO1Q9Y2Z2 717 aaKnown RBP8.49□□□□□ -1.05
NIF3L1-203ENST00000409129 ATRQ13535 2644 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 A0A0G2JMM0 328 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 A0A1B0GVC2 190 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 A0A1W2PPB8 328 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 A0A1W2PRS3 328 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 FAM221AA4D161 298 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 OR14I1A6ND48 311 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 KIR3DP1A8MWS1 328 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 C17orf105B2RV13 164 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 E7ESA3 106 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 G3V3Y1 287 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 BCKDKO14874 412 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 TP73O15350 636 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 LDB3O75112 727 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 STK16O75716 305 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 PIAS1O75925 651 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 WISP3O95389 354 aaPredicted RBP8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 IGHG3P01860 377 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 CCDC166P0CW27 439 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 CD22P20273 847 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 ACVR2AP27037 513 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 KCNC1P48547 511 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 HSPA7P48741 367 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 RNF4P78317 190 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 CBLBQ13191 982 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 LAPTM5Q13571 262 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 SERTAD2Q14140 314 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 FASTKD3Q14CZ7 662 aaKnown RBP8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 PDK4Q16654 411 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 HIST2H2ACQ16777 129 aaPredicted RBP8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 FBXO48Q5FWF7 155 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 PAGE2BQ5JRK9 111 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 CES4AQ5XG92 561 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 HIST2H2AA3Q6FI13 130 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 ZNF585AQ6P3V2 769 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 OPN5Q6U736 354 aa8.48□□□□□ -1.05
NIF3L1-203ENST00000409129 FAM47EQ6ZV65 393 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms