RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 IPPKQ9H8X2 491 aa17.93■□□□□ 0.46
SMARCB1-204ENST00000407422 ADGRE2Q9UHX3 823 aa17.93■□□□□ 0.46
SMARCB1-204ENST00000407422 YARS2Q9Y2Z4 477 aaKnown RBP17.93■□□□□ 0.46
SMARCB1-204ENST00000407422 RNF11Q9Y3C5 154 aa17.93■□□□□ 0.46
SMARCB1-204ENST00000407422 PCDHGA11Q9Y5H2 935 aa17.93■□□□□ 0.46
SMARCB1-204ENST00000407422 SPACA6W5XKT8 324 aa17.93■□□□□ 0.46
SMARCB1-204ENST00000407422 ABCA12Q86UK0 2595 aa17.93■□□□□ 0.46
SMARCB1-204ENST00000407422 ZNF407Q9C0G0 2248 aa17.92■□□□□ 0.46
SMARCB1-204ENST00000407422 DCHS2Q6V1P9 2916 aa17.92■□□□□ 0.46
SMARCB1-204ENST00000407422 WWP2O00308 870 aa17.92■□□□□ 0.46
SMARCB1-204ENST00000407422 FGF17O60258 216 aa17.92■□□□□ 0.46
SMARCB1-204ENST00000407422 CTAGE8P0CG41 777 aa17.92■□□□□ 0.46
SMARCB1-204ENST00000407422 TNNI3P19429 210 aa17.92■□□□□ 0.46
SMARCB1-204ENST00000407422 MAGEA12P43365 314 aa17.92■□□□□ 0.46
SMARCB1-204ENST00000407422 NEK2P51955 445 aa17.92■□□□□ 0.46
SMARCB1-204ENST00000407422 RAP1GDS1P52306 607 aa17.92■□□□□ 0.46
SMARCB1-204ENST00000407422 GPR85P60893 370 aa17.92■□□□□ 0.46
SMARCB1-204ENST00000407422 SERTAD2Q14140 314 aa17.92■□□□□ 0.46
SMARCB1-204ENST00000407422 HSDL2Q6YN16 418 aa17.92■□□□□ 0.46
SMARCB1-204ENST00000407422 SPPL2CQ8IUH8 684 aa17.92■□□□□ 0.46
SMARCB1-204ENST00000407422 CHERPQ8IWX8 916 aaKnown RBP17.92■□□□□ 0.46
SMARCB1-204ENST00000407422 CTAGE4Q8IX94 777 aa17.92■□□□□ 0.46
SMARCB1-204ENST00000407422 PTGR2Q8N8N7 351 aaPredicted RBP17.92■□□□□ 0.46
SMARCB1-204ENST00000407422 MORN4Q8NDC4 146 aa17.92■□□□□ 0.46
SMARCB1-204ENST00000407422 MNS1Q8NEH6 495 aa17.92■□□□□ 0.46
SMARCB1-204ENST00000407422 OR14A16Q8NHC5 309 aa17.92■□□□□ 0.46
SMARCB1-204ENST00000407422 SLC2A12Q8TD20 617 aa17.92■□□□□ 0.46
SMARCB1-204ENST00000407422 ISL2Q96A47 359 aa17.92■□□□□ 0.46
SMARCB1-204ENST00000407422 CDK15Q96Q40 435 aa17.92■□□□□ 0.46
SMARCB1-204ENST00000407422 ZNF717Q9BY31 904 aaPredicted RBP17.92■□□□□ 0.46
SMARCB1-204ENST00000407422 TSPYL1Q9H0U9 437 aa17.92■□□□□ 0.46
SMARCB1-204ENST00000407422 MYOTQ9UBF9 498 aa17.92■□□□□ 0.46
SMARCB1-204ENST00000407422 SUCOQ9UBS9 1254 aaKnown RBP17.92■□□□□ 0.46
SMARCB1-204ENST00000407422 KLF13Q9Y2Y9 288 aaPredicted RBP17.92■□□□□ 0.46
SMARCB1-204ENST00000407422 TSC22D4Q9Y3Q8 395 aa17.92■□□□□ 0.46
SMARCB1-204ENST00000407422 ATG4BQ9Y4P1 393 aa17.92■□□□□ 0.46
SMARCB1-204ENST00000407422 APCP25054 2843 aa17.91■□□□□ 0.46
SMARCB1-204ENST00000407422 SYNDIG1LA6NDD5 238 aa17.91■□□□□ 0.46
SMARCB1-204ENST00000407422 POC1B-GALNT4F8VUJ3 575 aa17.91■□□□□ 0.46
SMARCB1-204ENST00000407422 H0YIV9 168 aa17.91■□□□□ 0.46
SMARCB1-204ENST00000407422 PEX1O43933 1283 aa17.91■□□□□ 0.46
SMARCB1-204ENST00000407422 PRKRAO75569 313 aaKnown RBP17.91■□□□□ 0.46
SMARCB1-204ENST00000407422 ETHE1O95571 254 aa17.91■□□□□ 0.46
SMARCB1-204ENST00000407422 PIK3CGP48736 1102 aa17.91■□□□□ 0.46
SMARCB1-204ENST00000407422 HNRNPH2P55795 449 aaKnown RBP17.91■□□□□ 0.46
SMARCB1-204ENST00000407422 C18orf63Q68DL7 685 aa17.91■□□□□ 0.46
SMARCB1-204ENST00000407422 Q6ZPB1 254 aaPredicted RBP17.91■□□□□ 0.46
SMARCB1-204ENST00000407422 MRGPRGQ86SM5 289 aa17.91■□□□□ 0.46
SMARCB1-204ENST00000407422 PHF21BQ96EK2 531 aa17.91■□□□□ 0.46
SMARCB1-204ENST00000407422 TNPO3Q9Y5L0 923 aaKnown RBP17.91■□□□□ 0.46
SMARCB1-204ENST00000407422 CREBBPQ92793 2442 aa17.91■□□□□ 0.46
SMARCB1-204ENST00000407422 DNAJC13O75165 2243 aa17.91■□□□□ 0.46
SMARCB1-204ENST00000407422 WASHC1A8K0Z3 465 aa17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 PRSS44E7EML9 344 aa17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 OR7A17O14581 309 aa17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 EEDO75530 441 aaKnown RBP17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 OR6B1O95007 311 aa17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 PTGER1P34995 402 aa17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 HK2P52789 917 aa17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 CASP6P55212 293 aa17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 FGD2Q7Z6J4 655 aa17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 GPR180Q86V85 440 aa17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 GHDCQ8N2G8 530 aa17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 L3MBTL4Q8NA19 623 aa17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 OR52B6Q8NGF0 335 aa17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 DCAKDQ8WVC6 231 aa17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 RASL10BQ96S79 203 aa17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 CENPKQ9BS16 269 aa17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 RPF2Q9H7B2 306 aaKnown RBP17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 NOL11Q9H8H0 719 aaKnown RBP17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 DEPPQ9NTK1 212 aa17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 ERVK-11Q9UQG0 969 aa17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 IKBKGQ9Y6K9 419 aa17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 MYO9AB2RTY4 2548 aa17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 A8MVJ9 347 aa17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 KLRC4-KLRK1H3BQV0 150 aa17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 UGDHO60701 494 aa17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 ZNF354AO60765 605 aaPredicted RBP17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 PTX3P26022 381 aaPredicted RBP17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 GRNP28799 593 aaKnown RBP17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 BSGP35613 385 aa17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 SOX3P41225 446 aa17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 RNF4P78317 190 aa17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 IGLV3-21P80748 117 aaPredicted RBP17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 ADORA2A-AS1P86434 159 aa17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 GLE1Q53GS7 698 aaKnown RBP17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 SP5Q6BEB4 398 aaPredicted RBP17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 IL20RBQ6UXL0 311 aa17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 DGAT2L6Q6ZPD8 337 aa17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 ZCCHC7Q8N3Z6 543 aaKnown RBP17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 WDR20Q8TBZ3 569 aa17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 ZNF721Q8TF20 911 aa17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 ASB15Q8WXK1 588 aa17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 PPWD1Q96BP3 646 aaKnown RBP17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 REPS1Q96D71 796 aa17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 SCYL1Q96KG9 808 aa17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 NSUN5Q96P11 429 aaKnown RBP17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 HPF1Q9NWY4 346 aa17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 XPR1Q9UBH6 696 aa17.9■□□□□ 0.46
SMARCB1-204ENST00000407422 PKDREJQ9NTG1 2253 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms