RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 MPHOSPH10O00566 681 aaKnown RBP4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 KLF11O14901 512 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 SEC24AO95486 1093 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 NGFP01138 241 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 PROS1P07225 676 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 GLRA1P23415 457 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 CTNNA2P26232 953 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 PTPN4P29074 926 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 SOX6P35712 828 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 ALDH3B1P43353 468 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 HNMTP50135 292 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 GEMP55040 296 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 MTTPP55157 894 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 SGCGQ13326 291 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 EXOSC7Q15024 291 aaKnown RBP4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 RBBP5Q15291 538 aaKnown RBP4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 ZSWIM7Q19AV6 140 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 GPAT3Q53EU6 434 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 MPPE1Q53F39 396 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 CMPK2Q5EBM0 449 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 IL23RQ5VWK5 629 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 LYPLAL1Q5VWZ2 237 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 HIST2H2AA3Q6FI13 130 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 CAPN13Q6MZZ7 669 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 KDELC1Q6UW63 502 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 RBMS3Q6XE24 437 aaKnown RBP4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 ARMCX2Q7L311 632 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 BNIPLQ7Z465 357 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 SLC22A16Q86VW1 577 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 C17orf64Q86WR6 236 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 ZNF573Q86YE8 665 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 DCUN1D3Q8IWE4 304 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 IQCF2Q8IXL9 164 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 CERS5Q8N5B7 392 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 OR2T11Q8NH01 316 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 SMPDL3AQ92484 453 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 NCLNQ969V3 563 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 RPGRIP1Q96KN7 1286 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 ZNF354BQ96LW1 612 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 PGLYRP2Q96PD5 576 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 PCDHB18PQ96TA0 734 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 IL12RB2Q99665 862 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 GPA33Q99795 319 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 FUNDC2Q9BWH2 189 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 CARD6Q9BX69 1037 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 PITPNM3Q9BZ71 974 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 SLC26A1Q9H2B4 701 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 RIBC2Q9H4K1 309 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 BICC1Q9H694 974 aaKnown RBP4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 ATP13A3Q9H7F0 1226 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 SUDS3Q9H7L9 328 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 SLC52A3Q9NQ40 469 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 HPS4Q9NQG7 708 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 CENPMQ9NSP4 180 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 ZFP57Q9NU63 452 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 TECRQ9NZ01 308 aaKnown RBP4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 TAAR2Q9P1P5 351 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 VPS54Q9P1Q0 977 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 ZNF319Q9P2F9 582 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 DBF4Q9UBU7 674 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 LAMP5Q9UJQ1 280 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 MGAT4BQ9UQ53 548 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 KIF3AQ9Y496 699 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 KDRP35968 1356 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 WDR81Q562E7 1941 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 NEDD4P46934 1319 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 LMO7DNF2Z398 122 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 CCSO14618 274 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 APBB3O95704 486 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 FAM157CP0CG43 387 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 SLC2A2P11168 524 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 GNSP15586 552 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 GPX3P22352 226 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 IL4RP24394 825 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 PRDX2P32119 198 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 PRPHP41219 470 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 IFNAR2P48551 515 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 MYBPC1Q00872 1141 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 CDR2Q01850 454 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 DRP2Q13474 957 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 RAPSNQ13702 412 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 ACCSLQ4AC99 568 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 AGKQ53H12 422 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 STPG1Q5TH74 334 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 ZNF790Q6PG37 636 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 GSG1LQ6UXU4 331 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 ZER1Q7Z7L7 766 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 TMEM110Q86TL2 294 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 TRPT1Q86TN4 253 aaKnown RBP4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 CACUL1Q86Y37 369 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 TCEANCQ8N8B7 351 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 MAB21L3Q8N8X9 362 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 COLGALT1Q8NBJ5 622 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 GPRC5AQ8NFJ5 357 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 GATAD1Q8WUU5 269 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 TMEM45BQ96B21 275 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 CXorf58Q96LI9 332 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 ERGIC2Q96RQ1 377 aa4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 PAIP2Q9BPZ3 127 aaKnown RBP4.29□□□□□ -1.72
HMGB1P13-201ENST00000406019 ERP44Q9BS26 406 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms