RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 SKP1P63208 163 aa19.88■□□□□ 0.77
TPM1-208ENST00000404484 SELPLGQ14242 412 aa19.88■□□□□ 0.77
TPM1-208ENST00000404484 CCDC157Q569K6 752 aa19.88■□□□□ 0.77
TPM1-208ENST00000404484 NIPAL1Q6NVV3 410 aa19.88■□□□□ 0.77
TPM1-208ENST00000404484 GOLM1Q8NBJ4 401 aa19.88■□□□□ 0.77
TPM1-208ENST00000404484 OR2T12Q8NG77 320 aa19.88■□□□□ 0.77
TPM1-208ENST00000404484 ADAMTS14Q8WXS8 1223 aa19.88■□□□□ 0.77
TPM1-208ENST00000404484 OR5P2Q8WZ92 322 aa19.88■□□□□ 0.77
TPM1-208ENST00000404484 FAM120BQ96EK7 910 aaKnown RBP19.88■□□□□ 0.77
TPM1-208ENST00000404484 ZBED6CLQ96FA7 236 aaPredicted RBP19.88■□□□□ 0.77
TPM1-208ENST00000404484 KAT8Q9H7Z6 458 aaKnown RBP19.88■□□□□ 0.77
TPM1-208ENST00000404484 NEUROD4Q9HD90 331 aa19.88■□□□□ 0.77
TPM1-208ENST00000404484 FAM60AQ9NP50 221 aa19.88■□□□□ 0.77
TPM1-208ENST00000404484 PRDM9Q9NQV7 894 aa19.88■□□□□ 0.77
TPM1-208ENST00000404484 SLC6A13Q9NSD5 602 aa19.88■□□□□ 0.77
TPM1-208ENST00000404484 SOHLH2Q9NX45 425 aa19.88■□□□□ 0.77
TPM1-208ENST00000404484 MS4A12Q9NXJ0 267 aa19.88■□□□□ 0.77
TPM1-208ENST00000404484 TAS2R9Q9NYW1 312 aa19.88■□□□□ 0.77
TPM1-208ENST00000404484 PLCL2Q9UPR0 1127 aa19.88■□□□□ 0.77
TPM1-208ENST00000404484 CHD8Q9HCK8 2581 aa19.88■□□□□ 0.77
TPM1-208ENST00000404484 COL5A1P20908 1838 aaPredicted RBP19.88■□□□□ 0.77
TPM1-208ENST00000404484 AQP12BA6NM10 295 aa19.87■□□□□ 0.77
TPM1-208ENST00000404484 HYAL3O43820 417 aaPredicted RBP19.87■□□□□ 0.77
TPM1-208ENST00000404484 BUD31P41223 144 aaPredicted RBP19.87■□□□□ 0.77
TPM1-208ENST00000404484 GFERP55789 205 aa19.87■□□□□ 0.77
TPM1-208ENST00000404484 ABHD18Q0P651 414 aa19.87■□□□□ 0.77
TPM1-208ENST00000404484 AQP12AQ8IXF9 295 aa19.87■□□□□ 0.77
TPM1-208ENST00000404484 NAT6Q93015 286 aa19.87■□□□□ 0.77
TPM1-208ENST00000404484 CIDECQ96AQ7 238 aaPredicted RBP19.87■□□□□ 0.77
TPM1-208ENST00000404484 SPATA9Q9BWV2 254 aa19.87■□□□□ 0.77
TPM1-208ENST00000404484 ACSS1Q9NUB1 689 aaPredicted RBP19.87■□□□□ 0.77
TPM1-208ENST00000404484 SPACA6W5XKT8 324 aa19.87■□□□□ 0.77
TPM1-208ENST00000404484 MN1Q10571 1320 aaPredicted RBP19.87■□□□□ 0.77
TPM1-208ENST00000404484 ASXL3Q9C0F0 2248 aa19.87■□□□□ 0.77
TPM1-208ENST00000404484 FAM220BPB1ANY3 271 aa19.87■□□□□ 0.77
TPM1-208ENST00000404484 ARPC2O15144 300 aa19.87■□□□□ 0.77
TPM1-208ENST00000404484 C6orf47O95873 294 aa19.87■□□□□ 0.77
TPM1-208ENST00000404484 C9P02748 559 aa19.87■□□□□ 0.77
TPM1-208ENST00000404484 C8BP07358 591 aa19.87■□□□□ 0.77
TPM1-208ENST00000404484 NTSP30990 170 aa19.87■□□□□ 0.77
TPM1-208ENST00000404484 SHC2P98077 582 aa19.87■□□□□ 0.77
TPM1-208ENST00000404484 NDUFA9Q16795 377 aa19.87■□□□□ 0.77
TPM1-208ENST00000404484 MPEG1Q2M385 716 aa19.87■□□□□ 0.77
TPM1-208ENST00000404484 NKAIN2Q5VXU1 208 aa19.87■□□□□ 0.77
TPM1-208ENST00000404484 WDR74Q6RFH5 385 aaPredicted RBP19.87■□□□□ 0.77
TPM1-208ENST00000404484 SPRED1Q7Z699 444 aa19.87■□□□□ 0.77
TPM1-208ENST00000404484 MMP21Q8N119 569 aa19.87■□□□□ 0.77
TPM1-208ENST00000404484 OR10A6Q8NH74 314 aa19.87■□□□□ 0.77
TPM1-208ENST00000404484 ZFP28Q8NHY6 868 aa19.87■□□□□ 0.77
TPM1-208ENST00000404484 CCDC74AQ96AQ1 378 aa19.87■□□□□ 0.77
TPM1-208ENST00000404484 ZNF583Q96ND8 569 aa19.87■□□□□ 0.77
TPM1-208ENST00000404484 RAD21L1Q9H4I0 556 aa19.87■□□□□ 0.77
TPM1-208ENST00000404484 LYRM4Q9HD34 91 aa19.87■□□□□ 0.77
TPM1-208ENST00000404484 GIMAP4Q9NUV9 329 aa19.87■□□□□ 0.77
TPM1-208ENST00000404484 STOML1Q9UBI4 398 aa19.87■□□□□ 0.77
TPM1-208ENST00000404484 FBXW2Q9UKT8 454 aa19.87■□□□□ 0.77
TPM1-208ENST00000404484 PSME2Q9UL46 239 aa19.87■□□□□ 0.77
TPM1-208ENST00000404484 ATG4BQ9Y4P1 393 aa19.87■□□□□ 0.77
TPM1-208ENST00000404484 ACACBO00763 2458 aa19.86■□□□□ 0.77
TPM1-208ENST00000404484 LY6G6EA0A0G2JKS1 128 aa19.86■□□□□ 0.77
TPM1-208ENST00000404484 A0A1W2PR48 441 aa19.86■□□□□ 0.77
TPM1-208ENST00000404484 PROM1O43490 865 aa19.86■□□□□ 0.77
TPM1-208ENST00000404484 B4GAT1O43505 415 aa19.86■□□□□ 0.77
TPM1-208ENST00000404484 AIFM1O95831 613 aa19.86■□□□□ 0.77
TPM1-208ENST00000404484 NR2F6P10588 404 aa19.86■□□□□ 0.77
TPM1-208ENST00000404484 TLX1P31314 330 aaPredicted RBP19.86■□□□□ 0.77
TPM1-208ENST00000404484 FRKP42685 505 aaPredicted RBP19.86■□□□□ 0.77
TPM1-208ENST00000404484 HBA1P69905 142 aa19.86■□□□□ 0.77
TPM1-208ENST00000404484 RHDQ02161 417 aa19.86■□□□□ 0.77
TPM1-208ENST00000404484 MLC1Q15049 377 aa19.86■□□□□ 0.77
TPM1-208ENST00000404484 AMZ1Q400G9 498 aa19.86■□□□□ 0.77
TPM1-208ENST00000404484 DEFB134Q4QY38 66 aa19.86■□□□□ 0.77
TPM1-208ENST00000404484 TCTE1Q5JU00 501 aa19.86■□□□□ 0.77
TPM1-208ENST00000404484 SERPINA11Q86U17 422 aa19.86■□□□□ 0.77
TPM1-208ENST00000404484 CALHM3Q86XJ0 350 aa19.86■□□□□ 0.77
TPM1-208ENST00000404484 KMT5CQ86Y97 462 aa19.86■□□□□ 0.77
TPM1-208ENST00000404484 Q8N9G6 341 aaPredicted RBP19.86■□□□□ 0.77
TPM1-208ENST00000404484 N4BP2L2Q92802 583 aaPredicted RBP19.86■□□□□ 0.77
TPM1-208ENST00000404484 EXOSC8Q96B26 276 aaKnown RBP19.86■□□□□ 0.77
TPM1-208ENST00000404484 AURKBQ96GD4 344 aaPredicted RBP19.86■□□□□ 0.77
TPM1-208ENST00000404484 SCNM1Q9BWG6 230 aa19.86■□□□□ 0.77
TPM1-208ENST00000404484 NPLQ9BXD5 320 aaPredicted RBP19.86■□□□□ 0.77
TPM1-208ENST00000404484 IKZF5Q9H5V7 419 aa19.86■□□□□ 0.77
TPM1-208ENST00000404484 TPT1P8Q9HAU6 139 aa19.86■□□□□ 0.77
TPM1-208ENST00000404484 SLC35C2Q9NQQ7 365 aa19.86■□□□□ 0.77
TPM1-208ENST00000404484 EGFL7Q9UHF1 273 aa19.86■□□□□ 0.77
TPM1-208ENST00000404484 UTS2RQ9UKP6 389 aa19.86■□□□□ 0.77
TPM1-208ENST00000404484 ENTPD4Q9Y227 616 aa19.86■□□□□ 0.77
TPM1-208ENST00000404484 U3KQA8 63 aa19.86■□□□□ 0.77
TPM1-208ENST00000404484 IGHV5-51A0A0C4DH38 117 aa19.85■□□□□ 0.77
TPM1-208ENST00000404484 TCRBV3S1A0A5B6 114 aa19.85■□□□□ 0.77
TPM1-208ENST00000404484 ELOVL7A1L3X0 281 aa19.85■□□□□ 0.77
TPM1-208ENST00000404484 GSTA4O15217 222 aa19.85■□□□□ 0.77
TPM1-208ENST00000404484 KIF1CO43896 1103 aaKnown RBP19.85■□□□□ 0.77
TPM1-208ENST00000404484 GPX2P18283 190 aa19.85■□□□□ 0.77
TPM1-208ENST00000404484 EFNA1P20827 205 aaPredicted RBP19.85■□□□□ 0.77
TPM1-208ENST00000404484 ARL4DP49703 201 aa19.85■□□□□ 0.77
TPM1-208ENST00000404484 ERFP50548 548 aa19.85■□□□□ 0.77
TPM1-208ENST00000404484 MANFP55145 182 aaKnown RBP19.85■□□□□ 0.77
TPM1-208ENST00000404484 PCBP4P57723 403 aaKnown RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms