RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 LRRC73Q5JTD7 316 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 FRMPD2BQ6IN97 320 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 PRR23CQ6ZRP0 262 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 AQP11Q8NBQ7 271 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 OPALINQ96PE5 141 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 OR2A14Q96R47 310 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 TDP1Q9NUW8 608 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 C14orf119Q9NWQ9 140 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 ERVK13-1Q9NX77 482 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 ZNF221Q9UK13 617 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 SNX8Q9Y5X2 465 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 PCM1Q15154 2024 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 QSOX1O00391 747 aa18.91■□□□□ 0.62
CCDC47-202ENST00000403162 CAPN5O15484 640 aaPredicted RBP18.91■□□□□ 0.62
CCDC47-202ENST00000403162 SCG5P05408 212 aa18.91■□□□□ 0.62
CCDC47-202ENST00000403162 ARAFP10398 606 aa18.91■□□□□ 0.62
CCDC47-202ENST00000403162 ZNF30P17039 623 aa18.91■□□□□ 0.62
CCDC47-202ENST00000403162 ENDOUP21128 410 aaKnown RBP18.91■□□□□ 0.62
CCDC47-202ENST00000403162 CNR2P34972 360 aa18.91■□□□□ 0.62
CCDC47-202ENST00000403162 DCDC1P59894 354 aa18.91■□□□□ 0.62
CCDC47-202ENST00000403162 DOC2BQ14184 412 aa18.91■□□□□ 0.62
CCDC47-202ENST00000403162 STARD3Q14849 445 aa18.91■□□□□ 0.62
CCDC47-202ENST00000403162 CCSMST1Q4G0I0 132 aa18.91■□□□□ 0.62
CCDC47-202ENST00000403162 MED27Q6P2C8 311 aa18.91■□□□□ 0.62
CCDC47-202ENST00000403162 DPY19L3Q6ZPD9 716 aa18.91■□□□□ 0.62
CCDC47-202ENST00000403162 SLCO4C1Q6ZQN7 724 aa18.91■□□□□ 0.62
CCDC47-202ENST00000403162 FAM46DQ8NEK8 389 aa18.91■□□□□ 0.62
CCDC47-202ENST00000403162 TP53INP1Q96A56 240 aa18.91■□□□□ 0.62
CCDC47-202ENST00000403162 REPS1Q96D71 796 aa18.91■□□□□ 0.62
CCDC47-202ENST00000403162 SLC25A19Q9HC21 320 aa18.91■□□□□ 0.62
CCDC47-202ENST00000403162 FZD3Q9NPG1 666 aa18.91■□□□□ 0.62
CCDC47-202ENST00000403162 CCDC177Q9NQR7 707 aaPredicted RBP18.91■□□□□ 0.62
CCDC47-202ENST00000403162 CLDND1Q9NY35 253 aa18.91■□□□□ 0.62
CCDC47-202ENST00000403162 DSPPQ9NZW4 1301 aa18.91■□□□□ 0.62
CCDC47-202ENST00000403162 UGT2B17O75795 530 aa18.91■□□□□ 0.62
CCDC47-202ENST00000403162 SLC16A8O95907 504 aa18.91■□□□□ 0.62
CCDC47-202ENST00000403162 FURINP09958 794 aa18.91■□□□□ 0.62
CCDC47-202ENST00000403162 RPL3P39023 403 aaKnown RBP18.91■□□□□ 0.62
CCDC47-202ENST00000403162 CYP27C1Q4G0S4 372 aa18.91■□□□□ 0.62
CCDC47-202ENST00000403162 ZNF770Q6IQ21 691 aaPredicted RBP18.91■□□□□ 0.62
CCDC47-202ENST00000403162 GDPGP1Q6ZNW5 385 aa18.91■□□□□ 0.62
CCDC47-202ENST00000403162 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.91■□□□□ 0.62
CCDC47-202ENST00000403162 SCAMP4Q969E2 229 aa18.91■□□□□ 0.62
CCDC47-202ENST00000403162 RACGAP1Q9H0H5 632 aa18.91■□□□□ 0.62
CCDC47-202ENST00000403162 FAM83DQ9H4H8 585 aa18.91■□□□□ 0.62
CCDC47-202ENST00000403162 NMNAT1Q9HAN9 279 aaPredicted RBP18.91■□□□□ 0.62
CCDC47-202ENST00000403162 HHATLQ9HCP6 504 aa18.91■□□□□ 0.62
CCDC47-202ENST00000403162 CLEC1BQ9P126 229 aa18.91■□□□□ 0.62
CCDC47-202ENST00000403162 KCND3Q9UK17 655 aa18.91■□□□□ 0.62
CCDC47-202ENST00000403162 ACSL6Q9UKU0 697 aa18.91■□□□□ 0.62
CCDC47-202ENST00000403162 ANGPT4Q9Y264 503 aa18.91■□□□□ 0.62
CCDC47-202ENST00000403162 LSM2Q9Y333 95 aaKnown RBP18.91■□□□□ 0.62
CCDC47-202ENST00000403162 HELZP42694 1942 aaKnown RBP18.9■□□□□ 0.62
CCDC47-202ENST00000403162 C2orf16Q68DN1 1984 aa18.9■□□□□ 0.62
CCDC47-202ENST00000403162 REV3LO60673 3130 aa18.9■□□□□ 0.62
CCDC47-202ENST00000403162 OR2AG2A6NM03 316 aa18.9■□□□□ 0.62
CCDC47-202ENST00000403162 FADS2P1A8MWK0 482 aa18.9■□□□□ 0.62
CCDC47-202ENST00000403162 NPC1O15118 1278 aa18.9■□□□□ 0.62
CCDC47-202ENST00000403162 GASTP01350 101 aa18.9■□□□□ 0.62
CCDC47-202ENST00000403162 POLR2LP62875 67 aaKnown RBP18.9■□□□□ 0.62
CCDC47-202ENST00000403162 GPR50Q13585 617 aa18.9■□□□□ 0.62
CCDC47-202ENST00000403162 TP53BP2Q13625 1128 aa18.9■□□□□ 0.62
CCDC47-202ENST00000403162 BCL7AQ4VC05 210 aa18.9■□□□□ 0.62
CCDC47-202ENST00000403162 SYTL3Q4VX76 610 aa18.9■□□□□ 0.62
CCDC47-202ENST00000403162 GET4Q7L5D6 327 aaPredicted RBP18.9■□□□□ 0.62
CCDC47-202ENST00000403162 COMMD6Q7Z4G1 85 aa18.9■□□□□ 0.62
CCDC47-202ENST00000403162 SLC30A8Q8IWU4 369 aa18.9■□□□□ 0.62
CCDC47-202ENST00000403162 TMEM159Q96B96 161 aa18.9■□□□□ 0.62
CCDC47-202ENST00000403162 PPCDCQ96CD2 204 aa18.9■□□□□ 0.62
CCDC47-202ENST00000403162 VPS35Q96QK1 796 aa18.9■□□□□ 0.62
CCDC47-202ENST00000403162 PKP4Q99569 1192 aa18.9■□□□□ 0.62
CCDC47-202ENST00000403162 FAM8A1Q9UBU6 413 aa18.9■□□□□ 0.62
CCDC47-202ENST00000403162 PCDHGB2Q9Y5G2 931 aa18.9■□□□□ 0.62
CCDC47-202ENST00000403162 KCNE2Q9Y6J6 123 aa18.9■□□□□ 0.62
CCDC47-202ENST00000403162 FAM172BPA6NC97 362 aa18.89■□□□□ 0.62
CCDC47-202ENST00000403162 FOXE1O00358 373 aaPredicted RBP18.89■□□□□ 0.62
CCDC47-202ENST00000403162 IDH3BO43837 385 aa18.89■□□□□ 0.62
CCDC47-202ENST00000403162 RECKO95980 971 aa18.89■□□□□ 0.62
CCDC47-202ENST00000403162 CHI3L1P36222 383 aaPredicted RBP18.89■□□□□ 0.62
CCDC47-202ENST00000403162 BDKRB1P46663 353 aa18.89■□□□□ 0.62
CCDC47-202ENST00000403162 SNRPGP62308 76 aaKnown RBP18.89■□□□□ 0.62
CCDC47-202ENST00000403162 DLX2Q07687 328 aaPredicted RBP18.89■□□□□ 0.62
CCDC47-202ENST00000403162 GANABQ14697 944 aaKnown RBP18.89■□□□□ 0.62
CCDC47-202ENST00000403162 SLC5A12Q1EHB4 618 aa18.89■□□□□ 0.62
CCDC47-202ENST00000403162 MPEG1Q2M385 716 aa18.89■□□□□ 0.62
CCDC47-202ENST00000403162 ATAD3CQ5T2N8 411 aa18.89■□□□□ 0.62
CCDC47-202ENST00000403162 NEIL2Q969S2 332 aa18.89■□□□□ 0.62
CCDC47-202ENST00000403162 CIDECQ96AQ7 238 aaPredicted RBP18.89■□□□□ 0.62
CCDC47-202ENST00000403162 SNX18Q96RF0 628 aa18.89■□□□□ 0.62
CCDC47-202ENST00000403162 ASPNQ9BXN1 380 aa18.89■□□□□ 0.62
CCDC47-202ENST00000403162 PRM3Q9NNZ6 103 aa18.89■□□□□ 0.62
CCDC47-202ENST00000403162 TAS2R9Q9NYW1 312 aa18.89■□□□□ 0.62
CCDC47-202ENST00000403162 MAP4K5Q9Y4K4 846 aa18.89■□□□□ 0.62
CCDC47-202ENST00000403162 TRBC2A0A5B9 178 aa18.89■□□□□ 0.61
CCDC47-202ENST00000403162 IFNW1P05000 195 aa18.89■□□□□ 0.61
CCDC47-202ENST00000403162 CSTF2P33240 577 aaKnown RBP eCLIP18.89■□□□□ 0.61
CCDC47-202ENST00000403162 MAPK9P45984 424 aa18.89■□□□□ 0.61
CCDC47-202ENST00000403162 MEDAGQ5VYS4 303 aa18.89■□□□□ 0.61
CCDC47-202ENST00000403162 RAVER1Q8IY67 606 aaKnown RBP18.89■□□□□ 0.61
CCDC47-202ENST00000403162 OR8H2Q8N162 312 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms