RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 SEC13P55735 322 aa16.11■□□□□ 0.17
DNMT3A-205ENST00000402667 RPS21P63220 83 aaKnown RBP16.11■□□□□ 0.17
DNMT3A-205ENST00000402667 SGCGQ13326 291 aa16.11■□□□□ 0.17
DNMT3A-205ENST00000402667 DGCR6Q14129 220 aa16.11■□□□□ 0.17
DNMT3A-205ENST00000402667 PUM1Q14671 1186 aaKnown RBP eCLIP16.11■□□□□ 0.17
DNMT3A-205ENST00000402667 ITPRIPL2Q3MIP1 535 aa16.11■□□□□ 0.17
DNMT3A-205ENST00000402667 SYCE2Q6PIF2 218 aa16.11■□□□□ 0.17
DNMT3A-205ENST00000402667 PARM1Q6UWI2 310 aa16.11■□□□□ 0.17
DNMT3A-205ENST00000402667 SLC44A2Q8IWA5 706 aaPredicted RBP16.11■□□□□ 0.17
DNMT3A-205ENST00000402667 RAB8BQ92930 207 aa16.11■□□□□ 0.17
DNMT3A-205ENST00000402667 TIMM29Q9BSF4 260 aa16.11■□□□□ 0.17
DNMT3A-205ENST00000402667 RPP25Q9BUL9 199 aaKnown RBP16.11■□□□□ 0.17
DNMT3A-205ENST00000402667 BTBD1Q9H0C5 482 aa16.11■□□□□ 0.17
DNMT3A-205ENST00000402667 GOLGA4Q13439 2230 aaKnown RBP16.11■□□□□ 0.17
DNMT3A-205ENST00000402667 REV3LO60673 3130 aa16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 C5orf58C9J3I9 102 aa16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 CLEC3AO75596 197 aa16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 GADD45GO95257 159 aa16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 IFNW1P05000 195 aa16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 TFPTP0C1Z6 253 aa16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 DDX5P17844 614 aaKnown RBP16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 ST13P50502 369 aaKnown RBP16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 SPDYE7PQ495Y7 208 aa16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 OR4C11Q6IEV9 310 aa16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 KIAA1211LQ6NV74 962 aa16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 FAM20CQ8IXL6 584 aa16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 DRAXINQ8NBI3 349 aaPredicted RBP16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 RHOXF1Q8NHV9 184 aa16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 GANCQ8TET4 914 aa16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 FGF14Q92915 247 aa16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 ZBED6CLQ96FA7 236 aaPredicted RBP16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 TMEM19Q96HH6 336 aa16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 TEFMQ96QE5 360 aaKnown RBP16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 BCL7BQ9BQE9 202 aa16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 AICDAQ9GZX7 198 aa16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 FBXL12Q9NXK8 326 aa16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 HCN4Q9Y3Q4 1203 aa16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 A0A1W2PQU0 124 aa16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 GSTM5P46439 218 aa16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 IDH2P48735 452 aaKnown RBP16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 C21orf59P57076 290 aa16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 KCNC4Q03721 635 aa16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 ZNF776Q68DI1 518 aaPredicted RBP16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 CCDC103Q8IW40 242 aa16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 APOBEC4Q8WW27 367 aaKnown RBP16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 ZNF764Q96H86 408 aaPredicted RBP16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 RSPO3Q9BXY4 272 aaPredicted RBP16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 MKRN2Q9H000 416 aaKnown RBP16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 ZNF556Q9HAH1 456 aa16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 TBC1D23Q9NUY8 699 aa16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 RHCGQ9UBD6 479 aa16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 MOSPD1Q9UJG1 213 aa16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 SLC17A4Q9Y2C5 497 aa16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.1■□□□□ 0.17
DNMT3A-205ENST00000402667 NINQ8N4C6 2090 aa16.09■□□□□ 0.17
DNMT3A-205ENST00000402667 A0A0A6YYD5 115 aa16.09■□□□□ 0.17
DNMT3A-205ENST00000402667 LRIT2A6NDA9 550 aa16.09■□□□□ 0.17
DNMT3A-205ENST00000402667 OR52A4PA6NMU1 304 aa16.09■□□□□ 0.17
DNMT3A-205ENST00000402667 K7EQS6 105 aa16.09■□□□□ 0.17
DNMT3A-205ENST00000402667 LINC01565O15544 149 aa16.09■□□□□ 0.17
DNMT3A-205ENST00000402667 POU2F1P14859 743 aa16.09■□□□□ 0.17
DNMT3A-205ENST00000402667 PKLRP30613 574 aa16.09■□□□□ 0.17
DNMT3A-205ENST00000402667 KIR2DL1P43626 348 aaPredicted RBP16.09■□□□□ 0.17
DNMT3A-205ENST00000402667 FOXD4Q12950 439 aaPredicted RBP16.09■□□□□ 0.17
DNMT3A-205ENST00000402667 MAPK11Q15759 364 aa16.09■□□□□ 0.17
DNMT3A-205ENST00000402667 ADPRMQ3LIE5 342 aa16.09■□□□□ 0.17
DNMT3A-205ENST00000402667 MLIPQ5VWP3 458 aa16.09■□□□□ 0.17
DNMT3A-205ENST00000402667 P2RY8Q86VZ1 359 aa16.09■□□□□ 0.17
DNMT3A-205ENST00000402667 OR2L8Q8NGY9 312 aa16.09■□□□□ 0.17
DNMT3A-205ENST00000402667 OR14C36Q8NHC7 312 aa16.09■□□□□ 0.17
DNMT3A-205ENST00000402667 PHF10Q8WUB8 498 aaKnown RBP16.09■□□□□ 0.17
DNMT3A-205ENST00000402667 C17orf62Q9BQA9 187 aa16.09■□□□□ 0.17
DNMT3A-205ENST00000402667 COPS4Q9BT78 406 aa16.09■□□□□ 0.17
DNMT3A-205ENST00000402667 DPH7Q9BTV6 452 aa16.09■□□□□ 0.17
DNMT3A-205ENST00000402667 SLC17A9Q9BYT1 436 aa16.09■□□□□ 0.17
DNMT3A-205ENST00000402667 PBX4Q9BYU1 374 aa16.09■□□□□ 0.17
DNMT3A-205ENST00000402667 PLCXD1Q9NUJ7 323 aa16.09■□□□□ 0.17
DNMT3A-205ENST00000402667 GALNT8Q9NY28 637 aa16.09■□□□□ 0.17
DNMT3A-205ENST00000402667 PSORS1C1Q9UIG5 152 aa16.09■□□□□ 0.17
DNMT3A-205ENST00000402667 UNC80Q8N2C7 3258 aa16.09■□□□□ 0.17
DNMT3A-205ENST00000402667 HMGN4O00479 90 aa16.08■□□□□ 0.17
DNMT3A-205ENST00000402667 SH3BP5O60239 455 aa16.08■□□□□ 0.17
DNMT3A-205ENST00000402667 CCNB2O95067 398 aa16.08■□□□□ 0.17
DNMT3A-205ENST00000402667 MFN2O95140 757 aa16.08■□□□□ 0.17
DNMT3A-205ENST00000402667 LCKP06239 509 aa16.08■□□□□ 0.17
DNMT3A-205ENST00000402667 CCT3P49368 545 aaKnown RBP16.08■□□□□ 0.17
DNMT3A-205ENST00000402667 TMED1Q13445 227 aa16.08■□□□□ 0.17
DNMT3A-205ENST00000402667 KRT33BQ14525 404 aa16.08■□□□□ 0.17
DNMT3A-205ENST00000402667 ZNF793Q6ZN11 406 aa16.08■□□□□ 0.17
DNMT3A-205ENST00000402667 SLC15A4Q8N697 577 aa16.08■□□□□ 0.17
DNMT3A-205ENST00000402667 GPR32P1Q8NGA4 272 aa16.08■□□□□ 0.17
DNMT3A-205ENST00000402667 MIPOL1Q8TD10 442 aa16.08■□□□□ 0.17
DNMT3A-205ENST00000402667 GTPBP3Q969Y2 492 aaKnown RBP16.08■□□□□ 0.17
DNMT3A-205ENST00000402667 PLEKHA8Q96JA3 519 aa16.08■□□□□ 0.17
DNMT3A-205ENST00000402667 CDCA3Q99618 268 aaPredicted RBP16.08■□□□□ 0.17
DNMT3A-205ENST00000402667 PSD2Q9BQI7 771 aa16.08■□□□□ 0.17
DNMT3A-205ENST00000402667 LMAN2LQ9H0V9 348 aa16.08■□□□□ 0.17
DNMT3A-205ENST00000402667 KLHL31Q9H511 634 aa16.08■□□□□ 0.17
DNMT3A-205ENST00000402667 AMBNQ9NP70 447 aa16.08■□□□□ 0.17
DNMT3A-205ENST00000402667 ACSS1Q9NUB1 689 aaPredicted RBP16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms