RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 ZFP57Q9NU63 452 aa8.54□□□□□ -1.04
PTPRM-202ENST00000400053 PRRC2BQ5JSZ5 2229 aaKnown RBP8.54□□□□□ -1.04
PTPRM-202ENST00000400053 MYH7BA7E2Y1 1941 aa8.54□□□□□ -1.04
PTPRM-202ENST00000400053 LDB2O43679 373 aa8.54□□□□□ -1.04
PTPRM-202ENST00000400053 JUNP05412 331 aaKnown RBP8.54□□□□□ -1.04
PTPRM-202ENST00000400053 HCKP08631 526 aa8.54□□□□□ -1.04
PTPRM-202ENST00000400053 TCEA1P23193 301 aaKnown RBP8.54□□□□□ -1.04
PTPRM-202ENST00000400053 HTR2AP28223 471 aa8.54□□□□□ -1.04
PTPRM-202ENST00000400053 NRIP1P48552 1158 aa8.54□□□□□ -1.04
PTPRM-202ENST00000400053 DGKGP49619 791 aa8.54□□□□□ -1.04
PTPRM-202ENST00000400053 SLC10A2Q12908 348 aaPredicted RBP8.54□□□□□ -1.04
PTPRM-202ENST00000400053 TRAM1Q15629 374 aa8.54□□□□□ -1.04
PTPRM-202ENST00000400053 DECR1Q16698 335 aa8.54□□□□□ -1.04
PTPRM-202ENST00000400053 PLPP4Q5VZY2 271 aa8.54□□□□□ -1.04
PTPRM-202ENST00000400053 C3P1Q6ZMU1 363 aa8.54□□□□□ -1.04
PTPRM-202ENST00000400053 CHERPQ8IWX8 916 aaKnown RBP8.54□□□□□ -1.04
PTPRM-202ENST00000400053 Q8N402 240 aa8.54□□□□□ -1.04
PTPRM-202ENST00000400053 OR56A1Q8NGH5 318 aa8.54□□□□□ -1.04
PTPRM-202ENST00000400053 SLC25A36Q96CQ1 311 aa8.54□□□□□ -1.04
PTPRM-202ENST00000400053 TSGA13Q96PP4 275 aa8.54□□□□□ -1.04
PTPRM-202ENST00000400053 GKN1Q9NS71 199 aa8.54□□□□□ -1.04
PTPRM-202ENST00000400053 SH2B3Q9UQQ2 575 aa8.54□□□□□ -1.04
PTPRM-202ENST00000400053 YARS2Q9Y2Z4 477 aaKnown RBP8.54□□□□□ -1.04
PTPRM-202ENST00000400053 HS3ST4Q9Y661 456 aa8.54□□□□□ -1.04
PTPRM-202ENST00000400053 SNNO75324 88 aaPredicted RBP8.53□□□□□ -1.04
PTPRM-202ENST00000400053 RAD51DO75771 328 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 IL3P08700 152 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 GP1BBP13224 206 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 CFL1P23528 166 aaKnown RBP8.53□□□□□ -1.04
PTPRM-202ENST00000400053 HTR1EP28566 365 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 SLC6A6P31641 620 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 ATP4BP51164 291 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 GPR68Q15743 365 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 SLC35F1Q5T1Q4 408 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 GLT8D1Q68CQ7 371 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 GET4Q7L5D6 327 aaPredicted RBP8.53□□□□□ -1.04
PTPRM-202ENST00000400053 TM9SF4Q92544 642 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 SLC2A13Q96QE2 648 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 PFDN5Q99471 154 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 TTTY10Q9BZA0 68 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 CPQQ9Y646 472 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 SIPA1L3O60292 1781 aaPredicted RBP8.53□□□□□ -1.04
PTPRM-202ENST00000400053 ANKRD36CQ5JPF3 1778 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 SLC38A8A6NNN8 435 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 BCAS1O75363 584 aaPredicted RBP8.53□□□□□ -1.04
PTPRM-202ENST00000400053 NPPAP01160 153 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 ZNF35P13682 527 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 MYF6P23409 242 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 MLLT10P55197 1068 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 PITX1P78337 314 aaPredicted RBP8.53□□□□□ -1.04
PTPRM-202ENST00000400053 BCL2A1Q16548 175 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 TECRLQ5HYJ1 363 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 BAIAP2L2Q6UXY1 529 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 IGFN1Q86VF2 1251 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 KRTCAP2Q8N6L1 136 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 RAB8BQ92930 207 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 TMEM125Q96AQ2 219 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 TM9SF2Q99805 663 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 PPIL3Q9H2H8 161 aaKnown RBP8.53□□□□□ -1.04
PTPRM-202ENST00000400053 OR51B5Q9H339 312 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 ASB6Q9NWX5 421 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 NUFIP1Q9UHK0 495 aaKnown RBP8.53□□□□□ -1.04
PTPRM-202ENST00000400053 LRP5O75197 1615 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 C13orf42A0A1B0GVH6 325 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 DNAJB5O75953 348 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 HTR1AP08908 422 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 POLR2HP52434 150 aaKnown RBP8.53□□□□□ -1.04
PTPRM-202ENST00000400053 IRF5Q13568 498 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 DSG2Q14126 1118 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 LRRC32Q14392 662 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 UNC50Q53HI1 259 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 HAGHLQ6PII5 290 aaPredicted RBP8.53□□□□□ -1.04
PTPRM-202ENST00000400053 NPAS4Q8IUM7 802 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 SMPDL3AQ92484 453 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 CD180Q99467 661 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 OR2AG1Q9H205 316 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 ABCG5Q9H222 651 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 SEC61A2Q9H9S3 476 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 MRM3Q9HC36 420 aaKnown RBP8.53□□□□□ -1.04
PTPRM-202ENST00000400053 NLKQ9UBE8 527 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 GRXCR2A6NFK2 248 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 B4GAT1O43505 415 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 VEGFDO43915 354 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 CNTN5O94779 1100 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 C7P10643 843 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 GINS1Q14691 196 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 ZNF630Q2M218 657 aaPredicted RBP8.53□□□□□ -1.04
PTPRM-202ENST00000400053 ODF4Q2M2E3 257 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 STEAP4Q687X5 459 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 C22orf42Q6IC83 251 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 NPAS3Q8IXF0 933 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 CD300LFQ8TDQ1 290 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 TSPEARQ8WU66 669 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 GIMAP5Q96F15 307 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 SCRN2Q96FV2 425 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 CMKLR1Q99788 373 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 FBXL3Q9UKT7 428 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 ZFR2Q9UPR6 939 aaKnown RBP8.53□□□□□ -1.04
PTPRM-202ENST00000400053 SCML2Q9UQR0 700 aa8.53□□□□□ -1.04
PTPRM-202ENST00000400053 DNMT3AQ9Y6K1 912 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms