RNA–Protein interactions for RNA: ENST00000399543.1

AC025171.2-203, humanhuman

TSL 1 (best)

Gene AC025171.2, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025171.2-203ENST00000399543 SOX6P35712 828 aa12.42□□□□□ -0.42
AC025171.2-203ENST00000399543 FEN1P39748 380 aaKnown RBP12.42□□□□□ -0.42
AC025171.2-203ENST00000399543 SEC23BQ15437 767 aa12.42□□□□□ -0.42
AC025171.2-203ENST00000399543 TIMM50Q3ZCQ8 353 aa12.42□□□□□ -0.42
AC025171.2-203ENST00000399543 SPANXN2Q5MJ10 180 aa12.42□□□□□ -0.42
AC025171.2-203ENST00000399543 TMEM53Q6P2H8 277 aa12.42□□□□□ -0.42
AC025171.2-203ENST00000399543 CCBE1Q6UXH8 406 aaPredicted RBP12.42□□□□□ -0.42
AC025171.2-203ENST00000399543 TMIGD1Q6UXZ0 262 aa12.42□□□□□ -0.42
AC025171.2-203ENST00000399543 GDPD3Q7L5L3 318 aa12.42□□□□□ -0.42
AC025171.2-203ENST00000399543 TRMT11Q7Z4G4 463 aaKnown RBP12.42□□□□□ -0.42
AC025171.2-203ENST00000399543 HORMAD2Q8N7B1 307 aa12.42□□□□□ -0.42
AC025171.2-203ENST00000399543 FAM46DQ8NEK8 389 aa12.42□□□□□ -0.42
AC025171.2-203ENST00000399543 GPR32P1Q8NGA4 272 aa12.42□□□□□ -0.42
AC025171.2-203ENST00000399543 LRIG1Q96JA1 1093 aa12.42□□□□□ -0.42
AC025171.2-203ENST00000399543 OPALINQ96PE5 141 aa12.42□□□□□ -0.42
AC025171.2-203ENST00000399543 SLC25A19Q9HC21 320 aa12.42□□□□□ -0.42
AC025171.2-203ENST00000399543 FZD3Q9NPG1 666 aa12.42□□□□□ -0.42
AC025171.2-203ENST00000399543 C11orf16Q9NQ32 467 aa12.42□□□□□ -0.42
AC025171.2-203ENST00000399543 MYO10Q9HD67 2058 aa12.42□□□□□ -0.42
AC025171.2-203ENST00000399543 A8MU76 341 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 KPNA3O00505 521 aaPredicted RBP12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 SNX4O95219 450 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 ADAP00813 363 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 BCHEP06276 602 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 ADH1AP07327 375 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 GSTT2P0CG29 244 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 GSTT2BP0CG30 244 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 OPRD1P41143 372 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 LRIT3Q3SXY7 679 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 DEPDC1Q5TB30 811 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 TNFAIP8L2Q6P589 184 aaPredicted RBP12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 SLC39A5Q6ZMH5 540 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 SLC9B2Q86UD5 537 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 SLC30A8Q8IWU4 369 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 ADGRF3Q8IZF5 1079 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 EFHD2Q96C19 240 aaPredicted RBP12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 IL17FQ96PD4 163 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 TRNT1Q96Q11 434 aaKnown RBP12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 ZNF717Q9BY31 904 aaPredicted RBP12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 NLNQ9BYT8 704 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 NUAK2Q9H093 628 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 ABCG4Q9H172 646 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 HHATLQ9HCP6 504 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 SPATA7Q9P0W8 599 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 TBX21Q9UL17 535 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 ATP11BQ9Y2G3 1177 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 HEATR5BQ9P2D3 2071 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 ABHD14A-ACY1A0A1B0GW23 586 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 PSMD11O00231 422 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 PLPP1O14494 284 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 SOX14O95416 240 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 IGFBP1P08833 259 aaPredicted RBP12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 ACADLP28330 430 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 NFE2L1Q14494 772 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 ZNF77Q15935 545 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 SAXO2Q658L1 398 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 TCTN3Q6NUS6 607 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 WDR53Q7Z5U6 358 aaPredicted RBP12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 FAM129CQ86XR2 697 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 C2orf73Q8N5S3 287 aaPredicted RBP12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 HCAR2Q8TDS4 363 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 NEURL3Q96EH8 262 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 EHD3Q9NZN3 535 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 LSM2Q9Y333 95 aaKnown RBP12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 TSC22D4Q9Y3Q8 395 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 NUMA1Q14980 2115 aa12.41□□□□□ -0.42
AC025171.2-203ENST00000399543 PNMA8CA0A1B0GUJ8 204 aa12.4□□□□□ -0.42
AC025171.2-203ENST00000399543 TLR4O00206 839 aa12.4□□□□□ -0.42
AC025171.2-203ENST00000399543 RTCAO00442 366 aaKnown RBP12.4□□□□□ -0.42
AC025171.2-203ENST00000399543 SSX4O60224 188 aa12.4□□□□□ -0.42
AC025171.2-203ENST00000399543 MFN2O95140 757 aa12.4□□□□□ -0.42
AC025171.2-203ENST00000399543 CXCL14O95715 111 aa12.4□□□□□ -0.42
AC025171.2-203ENST00000399543 OSMP13725 252 aa12.4□□□□□ -0.42
AC025171.2-203ENST00000399543 DDCP20711 480 aa12.4□□□□□ -0.42
AC025171.2-203ENST00000399543 ELAVL4P26378 380 aaKnown RBP12.4□□□□□ -0.42
AC025171.2-203ENST00000399543 SOX3P41225 446 aa12.4□□□□□ -0.42
AC025171.2-203ENST00000399543 PRAMEF14Q5SWL7 426 aa12.4□□□□□ -0.42
AC025171.2-203ENST00000399543 PRAMEF13Q5VWM6 474 aa12.4□□□□□ -0.42
AC025171.2-203ENST00000399543 TMEM19Q96HH6 336 aa12.4□□□□□ -0.42
AC025171.2-203ENST00000399543 KCNS3Q9BQ31 491 aa12.4□□□□□ -0.42
AC025171.2-203ENST00000399543 ACAT2Q9BWD1 397 aa12.4□□□□□ -0.42
AC025171.2-203ENST00000399543 ZDHHC5Q9C0B5 715 aa12.4□□□□□ -0.42
AC025171.2-203ENST00000399543 ZCCHC2Q9C0B9 1178 aaKnown RBP12.4□□□□□ -0.42
AC025171.2-203ENST00000399543 A4GALTQ9NPC4 353 aa12.4□□□□□ -0.42
AC025171.2-203ENST00000399543 PAK6Q9NQU5 681 aaPredicted RBP12.4□□□□□ -0.42
AC025171.2-203ENST00000399543 FBXL12Q9NXK8 326 aa12.4□□□□□ -0.42
AC025171.2-203ENST00000399543 NDOR1Q9UHB4 597 aa12.4□□□□□ -0.42
AC025171.2-203ENST00000399543 CLEC2DQ9UHP7 191 aa12.4□□□□□ -0.42
AC025171.2-203ENST00000399543 PLAGL1Q9UM63 463 aa12.4□□□□□ -0.42
AC025171.2-203ENST00000399543 RBMX2Q9Y388 322 aaKnown RBP12.4□□□□□ -0.42
AC025171.2-203ENST00000399543 UNC80Q8N2C7 3258 aa12.4□□□□□ -0.42
AC025171.2-203ENST00000399543 B4GALT2O60909 372 aa12.4□□□□□ -0.42
AC025171.2-203ENST00000399543 SCG5P05408 212 aa12.4□□□□□ -0.42
AC025171.2-203ENST00000399543 EPHA5P54756 1037 aa12.4□□□□□ -0.42
AC025171.2-203ENST00000399543 WDR5P61964 334 aaKnown RBP12.4□□□□□ -0.42
AC025171.2-203ENST00000399543 SNRPGP62308 76 aaKnown RBP12.4□□□□□ -0.42
AC025171.2-203ENST00000399543 RHAGQ02094 409 aa12.4□□□□□ -0.42
AC025171.2-203ENST00000399543 ILKQ13418 452 aa12.4□□□□□ -0.42
AC025171.2-203ENST00000399543 RBM45Q8IUH3 476 aaKnown RBP12.4□□□□□ -0.42
AC025171.2-203ENST00000399543 RAB8BQ92930 207 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms