RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 STXBP1P61764 594 aaKnown RBP16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 SPIBQ01892 262 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 EMX1Q04741 257 aaPredicted RBP16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 NFATC3Q12968 1075 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 C11orf91Q3C1V1 193 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 SYT6Q5T7P8 510 aaPredicted RBP16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 KIAA1211LQ6NV74 962 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 ADCK2Q7Z695 626 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 KRT73Q86Y46 540 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 P3H2Q8IVL5 708 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 IL17RCQ8NAC3 791 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 OR2L5Q8NG80 312 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 OR2L3Q8NG85 312 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 OR5AK3PQ8NH89 298 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 CNIH3Q8TBE1 160 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 SLC38A5Q8WUX1 472 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 ZFPM2Q8WW38 1151 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 PROX1Q92786 737 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 LTB4R2Q9NPC1 389 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 SLC35C2Q9NQQ7 365 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 PRDM9Q9NQV7 894 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 SIRT3Q9NTG7 399 aaPredicted RBP16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 ACER3Q9NUN7 267 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 DNAAF2Q9NVR5 837 aaKnown RBP16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 ACSL6Q9UKU0 697 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 TESMINQ9Y4I5 508 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 IGKV1-8A0A0C4DH67 115 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 ANTXRLA6NF34 631 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 ANHXE9PGG2 379 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 RTCAO00442 366 aaKnown RBP16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 LINC01565O15544 149 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 GADD45GO95257 159 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 BCL10O95999 233 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 PPP2R1BP30154 601 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 MRM1Q6IN84 353 aaKnown RBP16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 DUS1LQ6P1R4 473 aaKnown RBP16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 TRIM69Q86WT6 500 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 LGI4Q8N135 537 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 LINC00471Q8N535 108 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 MFSD9Q8NBP5 474 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 ST13P5Q8NFI4 369 aaPredicted RBP16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 EZH1Q92800 747 aaPredicted RBP16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 SIPA1Q96FS4 1042 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 DPH7Q9BTV6 452 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 C8orf33Q9H7E9 229 aaPredicted RBP16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 LIN28AQ9H9Z2 209 aaKnown RBP16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 P2RX2Q9UBL9 471 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 WARS2Q9UGM6 360 aaKnown RBP16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 PCDHGA6Q9Y5G7 932 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 A0A1W2PQF6 199 aa16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 PRSS38A1L453 326 aa16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 EPOPA6NHQ4 379 aa16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 SH3BP5O60239 455 aa16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 CCNB2O95067 398 aa16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 MFN2O95140 757 aa16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 HIST1H1TP22492 207 aaPredicted RBP16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 HTR1BP28222 390 aa16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 CTHP32929 405 aa16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 ST13P50502 369 aaKnown RBP16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 CDH12P55289 794 aa16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 SEC13P55735 322 aa16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 HPCAP84074 193 aa16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 NFATC4Q14934 902 aa16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 LAPTM4AQ15012 233 aa16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 MOGQ16653 247 aa16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 COLEC12Q5KU26 742 aa16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 NDUFAF5Q5TEU4 345 aa16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 PRPF38BQ5VTL8 546 aaKnown RBP16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 ZNF425Q6IV72 752 aa16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 ABHD17CQ6PCB6 329 aa16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 SAMD14Q8IZD0 417 aaPredicted RBP16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 SLC5A8Q8N695 610 aa16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 HORMAD2Q8N7B1 307 aa16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 ZNF540Q8NDQ6 660 aa16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 RHOXF1Q8NHV9 184 aa16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 PHF10Q8WUB8 498 aaKnown RBP16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 MYDGFQ969H8 173 aa16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 FKBP10Q96AY3 582 aa16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 MS4A6EQ96DS6 147 aa16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 TEFMQ96QE5 360 aaKnown RBP16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 ROGDIQ9GZN7 287 aa16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 CCDC90BQ9GZT6 254 aa16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 BCL2L10Q9HD36 194 aa16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 PALMDQ9NP74 551 aa16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 SLAMF7Q9NQ25 335 aa16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 NECTIN3Q9NQS3 549 aa16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 PAK1IP1Q9NWT1 392 aaPredicted RBP16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 LYARQ9NX58 379 aaKnown RBP16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 CLEC1BQ9P126 229 aa16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 ENPP5Q9UJA9 477 aa16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 PCDHGA10Q9Y5H3 936 aa16.81■□□□□ 0.28
HLA-DQB1-204ENST00000399084 MAN2B1O00754 1011 aa16.8■□□□□ 0.28
HLA-DQB1-204ENST00000399084 SLC22A1O15245 554 aa16.8■□□□□ 0.28
HLA-DQB1-204ENST00000399084 FAM20BO75063 409 aa16.8■□□□□ 0.28
HLA-DQB1-204ENST00000399084 OPN1SWP03999 348 aa16.8■□□□□ 0.28
HLA-DQB1-204ENST00000399084 YPEL5P62699 121 aa16.8■□□□□ 0.28
HLA-DQB1-204ENST00000399084 ZNF829Q3KNS6 432 aaPredicted RBP16.8■□□□□ 0.28
HLA-DQB1-204ENST00000399084 CACUL1Q86Y37 369 aa16.8■□□□□ 0.28
HLA-DQB1-204ENST00000399084 MIPOL1Q8TD10 442 aa16.8■□□□□ 0.28
HLA-DQB1-204ENST00000399084 FAR1Q8WVX9 515 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms