RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 ERVW-1Q9UQF0 538 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 PRELID3BQ9Y3B1 194 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 SNX8Q9Y5X2 465 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 U3KQ87 197 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 ATG2BQ96BY7 2078 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 GNG14A0A1W2PPG7 69 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 EFCAB10A6NFE3 127 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 E7EQ34 232 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 H7C0S8 307 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 CLIC1O00299 241 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 ADAM11O75078 769 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 PTP4A3O75365 173 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 RPLP2P05387 115 aaKnown RBP4.81□□□□□ -1.64
SSR1-202ENST00000397511 LAMP1P11279 417 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 SRCP12931 536 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 AZGP1P25311 298 aaKnown RBP4.81□□□□□ -1.64
SSR1-202ENST00000397511 NSG1P42857 185 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 IDH2P48735 452 aaKnown RBP4.81□□□□□ -1.64
SSR1-202ENST00000397511 CSNK2BP67870 215 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 IRF8Q02556 426 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 ELP6Q0PNE2 266 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 ELAVL2Q12926 359 aaKnown RBP4.81□□□□□ -1.64
SSR1-202ENST00000397511 IKZF1Q13422 519 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 KCNC3Q14003 757 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 IRF3Q14653 427 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 GPR19Q15760 415 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 FBXO43Q4G163 708 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 ZNF697Q5TEC3 545 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 CAPN13Q6MZZ7 669 aaPredicted RBP4.81□□□□□ -1.64
SSR1-202ENST00000397511 CHST9Q7L1S5 443 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 KRT73Q86Y46 540 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 TMEM25Q86YD3 366 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 SLC44A2Q8IWA5 706 aaPredicted RBP4.81□□□□□ -1.64
SSR1-202ENST00000397511 TMEM132CQ8N3T6 1108 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 TEX19Q8NA77 164 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 HJURPQ8NCD3 748 aaPredicted RBP4.81□□□□□ -1.64
SSR1-202ENST00000397511 OR7G3Q8NG95 312 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 OR2AP1Q8NGE2 309 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 OR8J3Q8NGG0 315 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 SPPL2AQ8TCT8 520 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 RIT1Q92963 219 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 REPS1Q96D71 796 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 SGTBQ96EQ0 304 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 ALG14Q96F25 216 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 CHCHD6Q9BRQ6 235 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 WACQ9BTA9 647 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 REPIN1Q9BWE0 567 aaKnown RBP4.81□□□□□ -1.64
SSR1-202ENST00000397511 ZNF416Q9BWM5 594 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 PPIL3Q9H2H8 161 aaKnown RBP4.81□□□□□ -1.64
SSR1-202ENST00000397511 SLC32A1Q9H598 525 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 SERHLQ9NQF3 203 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 PCDHB16Q9NRJ7 776 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 DCAF13Q9NV06 445 aaKnown RBP4.81□□□□□ -1.64
SSR1-202ENST00000397511 EMC3Q9P0I2 261 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 B4GALT6Q9UBX8 382 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 GLS2Q9UI32 602 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 MRPS23Q9Y3D9 190 aaKnown RBP4.81□□□□□ -1.64
SSR1-202ENST00000397511 SAMHD1Q9Y3Z3 626 aaKnown RBP4.81□□□□□ -1.64
SSR1-202ENST00000397511 PRKAB1Q9Y478 270 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 HRH3Q9Y5N1 445 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 OR51B4Q9Y5P0 310 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 A0A096LPI6 279 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 ARNTLO00327 626 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 SLC28A1O00337 649 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 CCL16O15467 120 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 ETHE1O95571 254 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 IGSF6O95976 241 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 IFNA7P01567 189 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 EBLN1P0CF75 366 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 HSMCR30P0CW71 290 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 CD22P20273 847 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 CST5P28325 142 aaPredicted RBP4.8□□□□□ -1.64
SSR1-202ENST00000397511 PDHA2P29803 388 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 C21orf33P30042 268 aaPredicted RBP4.8□□□□□ -1.64
SSR1-202ENST00000397511 KIR3DL1P43629 444 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 BDKRB1P46663 353 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 DAPP51397 102 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 EPHB3P54753 998 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 DEFB103AP81534 67 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 NAE1Q13564 534 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 ZNF273Q14593 569 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 POU4F3Q15319 338 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 TCEA2Q15560 299 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 GRK1Q15835 563 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 BAK1Q16611 211 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 TATDN3Q17R31 274 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 TTLL9Q3SXZ7 439 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 TIMM50Q3ZCQ8 353 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 SOWAHCQ53LP3 525 aaPredicted RBP4.8□□□□□ -1.64
SSR1-202ENST00000397511 C6orf132Q5T0Z8 1188 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 C10orf62Q5T681 223 aaPredicted RBP4.8□□□□□ -1.64
SSR1-202ENST00000397511 NOXRED1Q6NXP6 359 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 LIPIQ6XZB0 460 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 TMC8Q8IU68 726 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 RASGRP3Q8IV61 690 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 C9orf62Q8N4C0 152 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 OR52H1Q8NGJ2 320 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 ST8SIA2Q92186 375 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 RBPMSQ93062 196 aaKnown RBP4.8□□□□□ -1.64
SSR1-202ENST00000397511 PTP4A1Q93096 173 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms