RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 INSM1Q01101 510 aaPredicted RBP14.15□□□□□ -0.14
CAPN3-207ENST00000397200 ABHD18Q0P651 414 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 TRA2AQ13595 282 aaKnown RBP eCLIP14.15□□□□□ -0.14
CAPN3-207ENST00000397200 MAP7Q14244 749 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 NRF1Q16656 503 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 NHSL2Q5HYW2 709 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 TMTC4Q5T4D3 741 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 ADNP2Q6IQ32 1131 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 DNAJC14Q6Y2X3 702 aaPredicted RBP14.15□□□□□ -0.14
CAPN3-207ENST00000397200 ZBTB49Q6ZSB9 765 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 ANKRD53Q8N9V6 530 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 RCBTB1Q8NDN9 531 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 OR10A6Q8NH74 314 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 THAP11Q96EK4 314 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 SLC41A2Q96JW4 573 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 FCRL4Q96PJ5 515 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 EBPLQ9BY08 206 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 REXO4Q9GZR2 422 aaKnown RBP14.15□□□□□ -0.14
CAPN3-207ENST00000397200 RHBGQ9H310 441 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 FAM60AQ9NP50 221 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 OLAHQ9NV23 265 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 ADGRE2Q9UHX3 823 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 PCDHGA4Q9Y5G9 962 aa14.15□□□□□ -0.14
CAPN3-207ENST00000397200 COL27A1Q8IZC6 1860 aaPredicted RBP14.14□□□□□ -0.15
CAPN3-207ENST00000397200 ADAMTS20P59510 1910 aa14.14□□□□□ -0.15
CAPN3-207ENST00000397200 ARHGAP10A1A4S6 786 aa14.14□□□□□ -0.15
CAPN3-207ENST00000397200 SCAMP2O15127 329 aaKnown RBP14.14□□□□□ -0.15
CAPN3-207ENST00000397200 MYO1DO94832 1006 aa14.14□□□□□ -0.15
CAPN3-207ENST00000397200 RASAL1O95294 804 aa14.14□□□□□ -0.15
CAPN3-207ENST00000397200 FTH1P19P0C7X4 201 aa14.14□□□□□ -0.15
CAPN3-207ENST00000397200 RAP2AP10114 183 aa14.14□□□□□ -0.15
CAPN3-207ENST00000397200 CEACAM1P13688 526 aa14.14□□□□□ -0.15
CAPN3-207ENST00000397200 TIA1P31483 386 aaKnown RBP eCLIP14.14□□□□□ -0.15
CAPN3-207ENST00000397200 AHRP35869 848 aa14.14□□□□□ -0.15
CAPN3-207ENST00000397200 CDKN2CP42773 168 aa14.14□□□□□ -0.15
CAPN3-207ENST00000397200 NOVA1P51513 510 aaKnown RBP14.14□□□□□ -0.15
CAPN3-207ENST00000397200 CYP4F2P78329 520 aa14.14□□□□□ -0.15
CAPN3-207ENST00000397200 SIM1P81133 766 aaPredicted RBP14.14□□□□□ -0.15
CAPN3-207ENST00000397200 ZFP36L1Q07352 338 aaKnown RBP14.14□□□□□ -0.15
CAPN3-207ENST00000397200 DEFB110Q30KQ9 67 aa14.14□□□□□ -0.15
CAPN3-207ENST00000397200 OR4F3Q6IEY1 312 aa14.14□□□□□ -0.15
CAPN3-207ENST00000397200 SLCO6A1Q86UG4 719 aa14.14□□□□□ -0.15
CAPN3-207ENST00000397200 ST13P4Q8IZP2 240 aaPredicted RBP14.14□□□□□ -0.15
CAPN3-207ENST00000397200 D2HGDHQ8N465 521 aa14.14□□□□□ -0.15
CAPN3-207ENST00000397200 DNAJC22Q8N4W6 341 aa14.14□□□□□ -0.15
CAPN3-207ENST00000397200 RERGQ96A58 199 aaPredicted RBP14.14□□□□□ -0.15
CAPN3-207ENST00000397200 REXO5Q96IC2 774 aaKnown RBP14.14□□□□□ -0.15
CAPN3-207ENST00000397200 GBP5Q96PP8 586 aa14.14□□□□□ -0.15
CAPN3-207ENST00000397200 PHF12Q96QT6 1004 aa14.14□□□□□ -0.15
CAPN3-207ENST00000397200 THUMPD3Q9BV44 507 aaKnown RBP14.14□□□□□ -0.15
CAPN3-207ENST00000397200 ANKRD60Q9BZ19 345 aa14.14□□□□□ -0.15
CAPN3-207ENST00000397200 PIF1Q9H611 641 aa14.14□□□□□ -0.15
CAPN3-207ENST00000397200 DMRT3Q9NQL9 472 aa14.14□□□□□ -0.15
CAPN3-207ENST00000397200 AP1M2Q9Y6Q5 423 aa14.14□□□□□ -0.15
CAPN3-207ENST00000397200 SAC3D1A6NKF1 404 aa14.13□□□□□ -0.15
CAPN3-207ENST00000397200 TPST1O60507 370 aa14.13□□□□□ -0.15
CAPN3-207ENST00000397200 LDLRP01130 860 aa14.13□□□□□ -0.15
CAPN3-207ENST00000397200 SERPIND1P05546 499 aa14.13□□□□□ -0.15
CAPN3-207ENST00000397200 HOXB6P17509 224 aaKnown RBP14.13□□□□□ -0.15
CAPN3-207ENST00000397200 PIK3CBP42338 1070 aa14.13□□□□□ -0.15
CAPN3-207ENST00000397200 PDX1P52945 283 aa14.13□□□□□ -0.15
CAPN3-207ENST00000397200 RPS13P62277 151 aaKnown RBP14.13□□□□□ -0.15
CAPN3-207ENST00000397200 MYBPC1Q00872 1141 aa14.13□□□□□ -0.15
CAPN3-207ENST00000397200 FRMPD2BQ6IN97 320 aa14.13□□□□□ -0.15
CAPN3-207ENST00000397200 DHRS13Q6UX07 377 aa14.13□□□□□ -0.15
CAPN3-207ENST00000397200 FKBP9P1Q75LS8 142 aa14.13□□□□□ -0.15
CAPN3-207ENST00000397200 B3GNT8Q7Z7M8 397 aa14.13□□□□□ -0.15
CAPN3-207ENST00000397200 MCATQ8IVS2 390 aaKnown RBP14.13□□□□□ -0.15
CAPN3-207ENST00000397200 C10orf111Q8N326 155 aa14.13□□□□□ -0.15
CAPN3-207ENST00000397200 CBR4Q8N4T8 237 aa14.13□□□□□ -0.15
CAPN3-207ENST00000397200 C1orf52Q8N6N3 182 aaKnown RBP14.13□□□□□ -0.15
CAPN3-207ENST00000397200 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.13□□□□□ -0.15
CAPN3-207ENST00000397200 OR2A5Q96R48 311 aa14.13□□□□□ -0.15
CAPN3-207ENST00000397200 CHID1Q9BWS9 393 aa14.13□□□□□ -0.15
CAPN3-207ENST00000397200 FAM192AQ9GZU8 254 aa14.13□□□□□ -0.15
CAPN3-207ENST00000397200 BTNL2Q9UIR0 455 aa14.13□□□□□ -0.15
CAPN3-207ENST00000397200 PLCL2Q9UPR0 1127 aa14.13□□□□□ -0.15
CAPN3-207ENST00000397200 AK5Q9Y6K8 562 aa14.13□□□□□ -0.15
CAPN3-207ENST00000397200 PTPRZ1P23471 2315 aaPredicted RBP14.13□□□□□ -0.15
CAPN3-207ENST00000397200 FAM149AA5PLN7 773 aa14.12□□□□□ -0.15
CAPN3-207ENST00000397200 H0YGG7 62 aa14.12□□□□□ -0.15
CAPN3-207ENST00000397200 UPK1AO00322 258 aa14.12□□□□□ -0.15
CAPN3-207ENST00000397200 CXCR6O00574 342 aa14.12□□□□□ -0.15
CAPN3-207ENST00000397200 RFXANKO14593 260 aa14.12□□□□□ -0.15
CAPN3-207ENST00000397200 NDUFS4O43181 175 aa14.12□□□□□ -0.15
CAPN3-207ENST00000397200 CLEC3AO75596 197 aa14.12□□□□□ -0.15
CAPN3-207ENST00000397200 LRATO95237 230 aa14.12□□□□□ -0.15
CAPN3-207ENST00000397200 TNFAIP8O95379 198 aa14.12□□□□□ -0.15
CAPN3-207ENST00000397200 B3GALT4O96024 378 aa14.12□□□□□ -0.15
CAPN3-207ENST00000397200 CSTF2P33240 577 aaKnown RBP eCLIP14.12□□□□□ -0.15
CAPN3-207ENST00000397200 ARF3P61204 181 aaPredicted RBP14.12□□□□□ -0.15
CAPN3-207ENST00000397200 KCNAB1Q14722 419 aa14.12□□□□□ -0.15
CAPN3-207ENST00000397200 PGS1Q32NB8 556 aa14.12□□□□□ -0.15
CAPN3-207ENST00000397200 FAM98BQ52LJ0 330 aaKnown RBP14.12□□□□□ -0.15
CAPN3-207ENST00000397200 CDCP2Q5VXM1 449 aa14.12□□□□□ -0.15
CAPN3-207ENST00000397200 ZNF551Q7Z340 670 aaPredicted RBP14.12□□□□□ -0.15
CAPN3-207ENST00000397200 VN1R5Q7Z5H4 357 aa14.12□□□□□ -0.15
CAPN3-207ENST00000397200 ASPGQ86U10 573 aa14.12□□□□□ -0.15
CAPN3-207ENST00000397200 SERPINA11Q86U17 422 aa14.12□□□□□ -0.15
CAPN3-207ENST00000397200 ZNF655Q8N720 491 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms